RNA–Protein interactions for RNA: YOR381W

FRE3, Transcript of Ferric reductase, yeast

Gene FRE3, Length 2,136 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
FRE3	YOR381W	NIS1	P53939	407 aa		4.87	□□□□□ -1.63
FRE3	YOR381W	KTR6	P54070	446 aa		4.87	□□□□□ -1.63
FRE3	YOR381W	AAT1	Q01802	451 aa		4.87	□□□□□ -1.63
FRE3	YOR381W	TRS31	Q03337	283 aa		4.87	□□□□□ -1.63
FRE3	YOR381W	CUE4	Q04201	117 aa	Predicted RBP	4.87	□□□□□ -1.63
FRE3	YOR381W	ARG7	Q04728	441 aa		4.87	□□□□□ -1.63
FRE3	YOR381W	MRI1	Q06489	411 aa	Known RBP	4.87	□□□□□ -1.63
FRE3	YOR381W	PIB1	Q06651	286 aa		4.87	□□□□□ -1.63
FRE3	YOR381W	MRPL35	Q06678	367 aa		4.87	□□□□□ -1.63
FRE3	YOR381W	FDH1	Q08911	376 aa		4.87	□□□□□ -1.63
FRE3	YOR381W	YTM1	Q12024	460 aa	Predicted RBP	4.87	□□□□□ -1.63
FRE3	YOR381W	TIR4	Q12218	487 aa	Predicted RBP	4.87	□□□□□ -1.63
FRE3	YOR381W	YOL114C	Q12322	202 aa		4.87	□□□□□ -1.63
FRE3	YOR381W	TY1A-NL1	Q12391	440 aa	Known RBP	4.87	□□□□□ -1.63
FRE3	YOR381W	YBL029C-A	Q3E756	94 aa		4.87	□□□□□ -1.63
FRE3	YOR381W	FKS1	P38631	1876 aa	Known RBP	4.87	□□□□□ -1.63
FRE3	YOR381W	HXK2	P04807	486 aa	Known RBP	4.87	□□□□□ -1.63
FRE3	YOR381W	DST1	P07273	309 aa		4.87	□□□□□ -1.63
FRE3	YOR381W	PRB1	P09232	635 aa		4.87	□□□□□ -1.63
FRE3	YOR381W	UNG1	P12887	359 aa		4.87	□□□□□ -1.63
FRE3	YOR381W	SEC62	P21825	274 aa		4.87	□□□□□ -1.63
FRE3	YOR381W	RFA1	P22336	621 aa	Known RBP	4.87	□□□□□ -1.63
FRE3	YOR381W	MRP17	P28778	131 aa		4.87	□□□□□ -1.63
FRE3	YOR381W	MSK1	P32048	576 aa		4.87	□□□□□ -1.63
FRE3	YOR381W	SFP1	P32432	683 aa		4.87	□□□□□ -1.63
FRE3	YOR381W	SNC2	P33328	115 aa		4.87	□□□□□ -1.63
FRE3	YOR381W	SHE2	P36068	246 aa	Known RBP RIP-Chip data	4.87	□□□□□ -1.63	not detected
FRE3	YOR381W	GPT2	P36148	743 aa		4.87	□□□□□ -1.63
FRE3	YOR381W	PEX28	P38848	579 aa		4.87	□□□□□ -1.63
FRE3	YOR381W	ASP1	P38986	381 aa	Predicted RBP	4.87	□□□□□ -1.63
FRE3	YOR381W	GAT2	P40209	560 aa		4.87	□□□□□ -1.63
FRE3	YOR381W	OPT1	P40897	799 aa		4.87	□□□□□ -1.63
FRE3	YOR381W	YHC3	P47040	408 aa		4.87	□□□□□ -1.63
FRE3	YOR381W	NCS6	P53088	359 aa		4.87	□□□□□ -1.63
FRE3	YOR381W	YGL114W	P53134	725 aa		4.87	□□□□□ -1.63
FRE3	YOR381W	BRE5	P53741	515 aa	Known RBP	4.87	□□□□□ -1.63
FRE3	YOR381W	FRE4	P53746	719 aa		4.87	□□□□□ -1.63
FRE3	YOR381W	GPI15	P53961	229 aa		4.87	□□□□□ -1.63
FRE3	YOR381W	SAE3	P89114	91 aa		4.87	□□□□□ -1.63
FRE3	YOR381W	RHO4	Q00246	291 aa		4.87	□□□□□ -1.63
FRE3	YOR381W	YPR109W	Q06104	294 aa		4.87	□□□□□ -1.63
FRE3	YOR381W	HBT1	Q07653	1046 aa	Known RBP	4.87	□□□□□ -1.63
FRE3	YOR381W	PLB3	Q08108	686 aa		4.87	□□□□□ -1.63
FRE3	YOR381W	AHA1	Q12449	350 aa	Known RBP	4.87	□□□□□ -1.63
FRE3	YOR381W	YJR112W-A	Q3E743	109 aa		4.87	□□□□□ -1.63
FRE3	YOR381W	YIL134C-A	Q45U18	67 aa		4.87	□□□□□ -1.63
FRE3	YOR381W	RPL9A	P05738	191 aa	Known RBP	4.86	□□□□□ -1.63
FRE3	YOR381W	SPT3	P06844	337 aa		4.86	□□□□□ -1.63
FRE3	YOR381W	ADH3	P07246	375 aa	Known RBP	4.86	□□□□□ -1.63
FRE3	YOR381W	TY1A-H	P0C2I4	478 aa	Known RBP	4.86	□□□□□ -1.63
FRE3	YOR381W	CKA1	P15790	372 aa		4.86	□□□□□ -1.63
FRE3	YOR381W	ATG15	P25641	520 aa		4.86	□□□□□ -1.63
FRE3	YOR381W	SHP1	P34223	423 aa		4.86	□□□□□ -1.63
FRE3	YOR381W	AXL2	P38928	823 aa		4.86	□□□□□ -1.63
FRE3	YOR381W	RAD55	P38953	406 aa		4.86	□□□□□ -1.63
FRE3	YOR381W	RPL34B	P40525	121 aa	Known RBP	4.86	□□□□□ -1.63
FRE3	YOR381W	YIR007W	P40566	764 aa		4.86	□□□□□ -1.63
FRE3	YOR381W	SSU1	P41930	458 aa		4.86	□□□□□ -1.63
FRE3	YOR381W	MEP2	P41948	499 aa		4.86	□□□□□ -1.63
FRE3	YOR381W	THI12	P42883	340 aa		4.86	□□□□□ -1.63
FRE3	YOR381W	THI5	P43534	340 aa		4.86	□□□□□ -1.63
FRE3	YOR381W	RPL9B	P51401	191 aa	Known RBP	4.86	□□□□□ -1.63
FRE3	YOR381W	SYF2	P53277	215 aa	Predicted RBP	4.86	□□□□□ -1.63
FRE3	YOR381W	COQ6	P53318	479 aa		4.86	□□□□□ -1.63
FRE3	YOR381W	CTK1	Q03957	528 aa	Known RBP	4.86	□□□□□ -1.63
FRE3	YOR381W	YML083C	Q04526	418 aa		4.86	□□□□□ -1.63
FRE3	YOR381W	VBA4	Q04602	768 aa	Known RBP	4.86	□□□□□ -1.63
FRE3	YOR381W	RTT103	Q05543	409 aa		4.86	□□□□□ -1.63
FRE3	YOR381W	YLR446W	Q06204	433 aa		4.86	□□□□□ -1.63
FRE3	YOR381W	MRX9	Q07349	420 aa	Known RBP	4.86	□□□□□ -1.63
FRE3	YOR381W	THI13	Q07748	340 aa		4.86	□□□□□ -1.63
FRE3	YOR381W	DDC1	Q08949	612 aa		4.86	□□□□□ -1.63
FRE3	YOR381W	ATG41	Q12048	136 aa		4.86	□□□□□ -1.63
FRE3	YOR381W	TMS1	Q12116	473 aa		4.86	□□□□□ -1.63
FRE3	YOR381W	UPC2	Q12151	913 aa		4.86	□□□□□ -1.63
FRE3	YOR381W	SKS1	Q12505	502 aa		4.86	□□□□□ -1.63
FRE3	YOR381W	YLR099W-A	Q3E798	87 aa		4.86	□□□□□ -1.63
FRE3	YOR381W	UBR2	Q07963	1872 aa		4.86	□□□□□ -1.63
FRE3	YOR381W	RPL31A	P0C2H8	113 aa	Known RBP	4.85	□□□□□ -1.63
FRE3	YOR381W	RPL31B	P0C2H9	113 aa	Known RBP	4.85	□□□□□ -1.63
FRE3	YOR381W	CAF20	P12962	161 aa	Known RBP	4.85	□□□□□ -1.63
FRE3	YOR381W	TFS1	P14306	219 aa		4.85	□□□□□ -1.63
FRE3	YOR381W	SNF5	P18480	905 aa		4.85	□□□□□ -1.63
FRE3	YOR381W	STE4	P18851	423 aa		4.85	□□□□□ -1.63
FRE3	YOR381W	AAR2	P32357	355 aa	Predicted RBP	4.85	□□□□□ -1.63
FRE3	YOR381W	SPS19	P32573	292 aa	Known RBP	4.85	□□□□□ -1.63
FRE3	YOR381W	TSA1	P34760	196 aa	Known RBP	4.85	□□□□□ -1.63
FRE3	YOR381W	TVP38	P36164	337 aa		4.85	□□□□□ -1.63
FRE3	YOR381W	HAT2	P39984	401 aa		4.85	□□□□□ -1.63
FRE3	YOR381W	GET2	P40056	285 aa		4.85	□□□□□ -1.63
FRE3	YOR381W	PAM16	P42949	149 aa		4.85	□□□□□ -1.63
FRE3	YOR381W	RMD8	P43620	662 aa		4.85	□□□□□ -1.63
FRE3	YOR381W	DPB11	P47027	764 aa	Predicted RBP	4.85	□□□□□ -1.63
FRE3	YOR381W	NUP57	P48837	541 aa		4.85	□□□□□ -1.63
FRE3	YOR381W	MTL1	P53214	551 aa		4.85	□□□□□ -1.63
FRE3	YOR381W	NRK1	P53915	240 aa		4.85	□□□□□ -1.63
FRE3	YOR381W	MTQ1	P53944	314 aa		4.85	□□□□□ -1.63
FRE3	YOR381W	TPS1	Q00764	495 aa	Known RBP	4.85	□□□□□ -1.63
FRE3	YOR381W	YSA1	Q01976	231 aa		4.85	□□□□□ -1.63
FRE3	YOR381W	GOT1	Q03554	138 aa		4.85	□□□□□ -1.63

Retrieved 100 of 5,963 RNA–protein pairs in 21.7 ms