RNA–Protein interactions for RNA: YOR054C

VHS3, Transcript of Negative regulatory subunit of protein phosphatase 1 Ppz1p, yeastyeast

Gene VHS3, Length 2,025 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VHS3YOR054C NAR1P23503 491 aaKnown RBP3.84□□□□□ -1.79
VHS3YOR054C RRP7P25368 297 aaPredicted RBP3.84□□□□□ -1.79
VHS3YOR054C MRP20P32387 263 aa3.84□□□□□ -1.79
VHS3YOR054C RPD3P32561 433 aa3.84□□□□□ -1.79
VHS3YOR054C LIP5P32875 414 aa3.84□□□□□ -1.79
VHS3YOR054C VBA5P36172 582 aa3.84□□□□□ -1.79
VHS3YOR054C EHT1P38295 451 aa3.84□□□□□ -1.79
VHS3YOR054C VMA21P41806 77 aa3.84□□□□□ -1.79
VHS3YOR054C AGX1P43567 385 aa3.84□□□□□ -1.79
VHS3YOR054C DAN1P47178 298 aa3.84□□□□□ -1.79
VHS3YOR054C CCC1P47818 322 aa3.84□□□□□ -1.79
VHS3YOR054C YGL185CP53100 379 aa3.84□□□□□ -1.79
VHS3YOR054C MED7Q08278 222 aa3.84□□□□□ -1.79
VHS3YOR054C MRN1Q08925 612 aaKnown RBP RIP-Chip data3.84□□□□□ -1.79not detected
VHS3YOR054C NUS1Q12063 375 aa3.84□□□□□ -1.79
VHS3YOR054C YLR049CQ12110 428 aa3.84□□□□□ -1.79
VHS3YOR054C GIS3Q12418 502 aa3.84□□□□□ -1.79
VHS3YOR054C PSF1Q12488 208 aa3.84□□□□□ -1.79
VHS3YOR054C RPL9AP05738 191 aaKnown RBP3.83□□□□□ -1.8
VHS3YOR054C SRM1P21827 482 aa3.83□□□□□ -1.8
VHS3YOR054C RFA1P22336 621 aaKnown RBP3.83□□□□□ -1.8
VHS3YOR054C AHC2P25649 128 aa3.83□□□□□ -1.8
VHS3YOR054C PMI40P29952 429 aaKnown RBP3.83□□□□□ -1.8
VHS3YOR054C GSP1P32835 219 aaKnown RBP3.83□□□□□ -1.8
VHS3YOR054C GSP2P32836 220 aaKnown RBP3.83□□□□□ -1.8
VHS3YOR054C MSN4P33749 630 aa3.83□□□□□ -1.8
VHS3YOR054C GPT2P36148 743 aa3.83□□□□□ -1.8
VHS3YOR054C MRPL28P36527 147 aa3.83□□□□□ -1.8
VHS3YOR054C SDH4P37298 181 aa3.83□□□□□ -1.8
VHS3YOR054C ALP1P38971 573 aa3.83□□□□□ -1.8
VHS3YOR054C XDJ1P39102 459 aa3.83□□□□□ -1.8
VHS3YOR054C DHH1P39517 506 aaKnown RBP3.83□□□□□ -1.8
VHS3YOR054C BMT5P40493 336 aa3.83□□□□□ -1.8
VHS3YOR054C PKP1P40530 394 aa3.83□□□□□ -1.8
VHS3YOR054C MND2P40577 368 aa3.83□□□□□ -1.8
VHS3YOR054C SNM1P40993 198 aa3.83□□□□□ -1.8
VHS3YOR054C HXT14P42833 540 aa3.83□□□□□ -1.8
VHS3YOR054C YJR056CP47115 236 aa3.83□□□□□ -1.8
VHS3YOR054C MTR3P48240 250 aaPredicted RBP3.83□□□□□ -1.8
VHS3YOR054C RPL9BP51401 191 aaKnown RBP3.83□□□□□ -1.8
VHS3YOR054C SDT1P53078 280 aa3.83□□□□□ -1.8
VHS3YOR054C YNL018CP53976 612 aa3.83□□□□□ -1.8
VHS3YOR054C MSS11Q03825 758 aa3.83□□□□□ -1.8
VHS3YOR054C MRI1Q06489 411 aaKnown RBP3.83□□□□□ -1.8
VHS3YOR054C MRPL35Q06678 367 aa3.83□□□□□ -1.8
VHS3YOR054C RFU1Q08003 200 aa3.83□□□□□ -1.8
VHS3YOR054C MCA1Q08601 432 aa3.83□□□□□ -1.8
VHS3YOR054C SFG1Q12507 346 aa3.83□□□□□ -1.8
VHS3YOR054C PNO1Q99216 274 aaKnown RBP3.83□□□□□ -1.8
VHS3YOR054C CKA1P15790 372 aa3.83□□□□□ -1.8
VHS3YOR054C ZRC1P20107 442 aa3.83□□□□□ -1.8
VHS3YOR054C CPR4P25334 318 aa3.83□□□□□ -1.8
VHS3YOR054C VPH1P32563 840 aaKnown RBP3.83□□□□□ -1.8
VHS3YOR054C COX13P32799 129 aa3.83□□□□□ -1.8
VHS3YOR054C SOF1P33750 489 aaKnown RBP3.83□□□□□ -1.8
VHS3YOR054C TSA1P34760 196 aaKnown RBP3.83□□□□□ -1.8
VHS3YOR054C GMH1P36125 273 aa3.83□□□□□ -1.8
VHS3YOR054C MDM31P38880 579 aa3.83□□□□□ -1.8
VHS3YOR054C GCV3P39726 170 aaPredicted RBP3.83□□□□□ -1.8
VHS3YOR054C NPP2P39997 493 aa3.83□□□□□ -1.8
VHS3YOR054C BUR6P40096 142 aa3.83□□□□□ -1.8
VHS3YOR054C RRG9P40156 214 aa3.83□□□□□ -1.8
VHS3YOR054C MPM1P40364 252 aa3.83□□□□□ -1.8
VHS3YOR054C GLC8P41818 229 aa3.83□□□□□ -1.8
VHS3YOR054C MAF1P41910 395 aa3.83□□□□□ -1.8
VHS3YOR054C DPB11P47027 764 aaPredicted RBP3.83□□□□□ -1.8
VHS3YOR054C ALT2P52892 507 aa3.83□□□□□ -1.8
VHS3YOR054C COS10P52924 374 aa3.83□□□□□ -1.8
VHS3YOR054C BUD9P53226 547 aa3.83□□□□□ -1.8
VHS3YOR054C VOA1P53262 265 aa3.83□□□□□ -1.8
VHS3YOR054C LSB1P53281 241 aa3.83□□□□□ -1.8
VHS3YOR054C MPA43P53583 542 aaPredicted RBP3.83□□□□□ -1.8
VHS3YOR054C KTR6P54070 446 aa3.83□□□□□ -1.8
VHS3YOR054C MRP51Q02950 344 aa3.83□□□□□ -1.8
VHS3YOR054C CUE4Q04201 117 aaPredicted RBP3.83□□□□□ -1.8
VHS3YOR054C EMI1Q04406 187 aa3.83□□□□□ -1.8
VHS3YOR054C DCR2Q05924 578 aa3.83□□□□□ -1.8
VHS3YOR054C FRQ1Q06389 190 aa3.83□□□□□ -1.8
VHS3YOR054C MFG1Q07684 458 aa3.83□□□□□ -1.8
VHS3YOR054C AIM39Q08223 395 aa3.83□□□□□ -1.8
VHS3YOR054C HOS1Q12214 470 aa3.83□□□□□ -1.8
VHS3YOR054C UBX3Q12229 455 aa3.83□□□□□ -1.8
VHS3YOR054C RDI1Q12434 202 aa3.83□□□□□ -1.8
VHS3YOR054C MRX4Q12467 430 aa3.83□□□□□ -1.8
VHS3YOR054C RMD5Q12508 421 aa3.83□□□□□ -1.8
VHS3YOR054C MEX67Q99257 599 aaKnown RBP3.83□□□□□ -1.8
VHS3YOR054C SIR2P06700 562 aa3.82□□□□□ -1.8
VHS3YOR054C RPC40P07703 335 aaKnown RBP3.82□□□□□ -1.8
VHS3YOR054C RPL31AP0C2H8 113 aaKnown RBP3.82□□□□□ -1.8
VHS3YOR054C RPL31BP0C2H9 113 aaKnown RBP3.82□□□□□ -1.8
VHS3YOR054C YOL163WP0CF20 169 aa3.82□□□□□ -1.8
VHS3YOR054C RPS4AP0CX35 261 aaKnown RBP3.82□□□□□ -1.8
VHS3YOR054C RPS4BP0CX36 261 aaKnown RBP3.82□□□□□ -1.8
VHS3YOR054C PDX1P16451 410 aa3.82□□□□□ -1.8
VHS3YOR054C SEC59P20048 519 aa3.82□□□□□ -1.8
VHS3YOR054C PRE1P22141 198 aaKnown RBP3.82□□□□□ -1.8
VHS3YOR054C COQ3P27680 312 aa3.82□□□□□ -1.8
VHS3YOR054C MLF3P32047 452 aa3.82□□□□□ -1.8
VHS3YOR054C NTH1P32356 751 aa3.82□□□□□ -1.8
VHS3YOR054C MRP4P32902 394 aa3.82□□□□□ -1.8
Retrieved 100 of 5,963 RNA–protein pairs in 35.3 ms