RNA–Protein interactions for RNA: YML005W

TRM12, Transcript of S-adenosylmethionine-dependent methyltransferase, yeast

Gene TRM12, Length 1,389 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TRM12	YML005W	ARO2	P28777	376 aa	Known RBP	3.18	□□□□□ -1.9
TRM12	YML005W	ITR2	P30606	609 aa		3.18	□□□□□ -1.9
TRM12	YML005W	MEI5	P32489	222 aa		3.18	□□□□□ -1.9
TRM12	YML005W	SWD2	P36104	329 aa	Predicted RBP	3.18	□□□□□ -1.9
TRM12	YML005W	MRPL10	P36520	322 aa		3.18	□□□□□ -1.9
TRM12	YML005W	HIS2	P38635	335 aa		3.18	□□□□□ -1.9
TRM12	YML005W	CTM1	P38818	585 aa		3.18	□□□□□ -1.9
TRM12	YML005W	SMC2	P38989	1170 aa	Known RBP	3.18	□□□□□ -1.9
TRM12	YML005W	YNL208W	P40159	199 aa	Known RBP	3.18	□□□□□ -1.9
TRM12	YML005W	HCH1	P53834	153 aa		3.18	□□□□□ -1.9
TRM12	YML005W	IMP4	P53941	290 aa	Known RBP	3.18	□□□□□ -1.9
TRM12	YML005W	SCS7	Q03529	384 aa		3.18	□□□□□ -1.9
TRM12	YML005W	GRX3	Q03835	250 aa		3.18	□□□□□ -1.9
TRM12	YML005W	YMR027W	Q04371	470 aa		3.18	□□□□□ -1.9
TRM12	YML005W	TLG2	Q08144	397 aa		3.18	□□□□□ -1.9
TRM12	YML005W	PLP2	Q12017	286 aa		3.18	□□□□□ -1.9
TRM12	YML005W	TY3A-G	Q12173	290 aa		3.18	□□□□□ -1.9
TRM12	YML005W	YOL107W	Q12239	342 aa		3.18	□□□□□ -1.9
TRM12	YML005W	JID1	Q12350	301 aa		3.18	□□□□□ -1.9
TRM12	YML005W	TY3A-I	Q99219	290 aa		3.18	□□□□□ -1.9
TRM12	YML005W	TDH3	P00359	332 aa	Known RBP RIP-Chip data	3.17	□□□□□ -1.9	not detected
TRM12	YML005W	IMP3	P32899	183 aa	Predicted RBP	3.17	□□□□□ -1.9
TRM12	YML005W	PEX22	P39718	180 aa		3.17	□□□□□ -1.9
TRM12	YML005W	OXA1	P39952	402 aa		3.17	□□□□□ -1.9
TRM12	YML005W	AIM10	P39965	576 aa	Known RBP	3.17	□□□□□ -1.9
TRM12	YML005W	YER186C	P40101	306 aa		3.17	□□□□□ -1.9
TRM12	YML005W	AGP3	P43548	558 aa		3.17	□□□□□ -1.9
TRM12	YML005W	AGX1	P43567	385 aa		3.17	□□□□□ -1.9
TRM12	YML005W	YJL118W	P47022	219 aa		3.17	□□□□□ -1.9
TRM12	YML005W	SED5	Q01590	340 aa		3.17	□□□□□ -1.9
TRM12	YML005W	SPP2	Q02521	185 aa		3.17	□□□□□ -1.9
TRM12	YML005W	FSH2	Q05015	223 aa		3.17	□□□□□ -1.9
TRM12	YML005W	CMS1	Q07897	291 aa	Known RBP	3.17	□□□□□ -1.9
TRM12	YML005W	YLR012C	Q07927	99 aa		3.17	□□□□□ -1.9
TRM12	YML005W	IRC25	Q07951	179 aa		3.17	□□□□□ -1.9
TRM12	YML005W	RDL2	Q08742	149 aa	Known RBP	3.17	□□□□□ -1.9
TRM12	YML005W	ATP6	P00854	259 aa		3.16	□□□□□ -1.9
TRM12	YML005W	PHO2	P07269	559 aa		3.16	□□□□□ -1.9
TRM12	YML005W	CBS2	P14905	389 aa		3.16	□□□□□ -1.9
TRM12	YML005W	COS9	P36034	407 aa		3.16	□□□□□ -1.9
TRM12	YML005W	YPC1	P38298	316 aa		3.16	□□□□□ -1.9
TRM12	YML005W	YHR035W	P38769	630 aa		3.16	□□□□□ -1.9
TRM12	YML005W	PFS1	P38872	237 aa		3.16	□□□□□ -1.9
TRM12	YML005W	MIG3	P39943	394 aa		3.16	□□□□□ -1.9
TRM12	YML005W	GDS1	P41913	522 aa		3.16	□□□□□ -1.9
TRM12	YML005W	MOB2	P43563	287 aa		3.16	□□□□□ -1.9
TRM12	YML005W	AIM23	P47015	356 aa		3.16	□□□□□ -1.9
TRM12	YML005W	CDH1	P53197	566 aa		3.16	□□□□□ -1.9
TRM12	YML005W	TPC1	P53257	314 aa		3.16	□□□□□ -1.9
TRM12	YML005W	PRP38	Q00723	242 aa	Predicted RBP	3.16	□□□□□ -1.9
TRM12	YML005W	SKI8	Q02793	397 aa	Predicted RBP	3.16	□□□□□ -1.9
TRM12	YML005W	YMR010W	Q03687	405 aa		3.16	□□□□□ -1.9
TRM12	YML005W	ATC1	Q04005	294 aa		3.16	□□□□□ -1.9
TRM12	YML005W	SNX41	Q04053	625 aa		3.16	□□□□□ -1.9
TRM12	YML005W	RNH1	Q04740	348 aa		3.16	□□□□□ -1.9
TRM12	YML005W	COX20	Q04935	205 aa		3.16	□□□□□ -1.9
TRM12	YML005W	YTH1	Q06102	208 aa	Predicted RBP	3.16	□□□□□ -1.9
TRM12	YML005W	SFM1	Q12314	213 aa		3.16	□□□□□ -1.9
TRM12	YML005W	ERP3	Q12403	225 aa		3.16	□□□□□ -1.9
TRM12	YML005W	RPL31A	P0C2H8	113 aa	Known RBP	3.15	□□□□□ -1.9
TRM12	YML005W	YSR3	P23501	404 aa		3.15	□□□□□ -1.9
TRM12	YML005W	GIT1	P25346	518 aa		3.15	□□□□□ -1.9
TRM12	YML005W	GCG1	P32656	232 aa	Known RBP	3.15	□□□□□ -1.9
TRM12	YML005W	PDC2	P32896	925 aa		3.15	□□□□□ -1.9
TRM12	YML005W	COY1	P34237	679 aa		3.15	□□□□□ -1.9
TRM12	YML005W	LSM12	P38828	187 aa	Known RBP	3.15	□□□□□ -1.9
TRM12	YML005W	CHL4	P38907	458 aa		3.15	□□□□□ -1.9
TRM12	YML005W	PET8	P38921	284 aa		3.15	□□□□□ -1.9
TRM12	YML005W	TIM17	P39515	158 aa		3.15	□□□□□ -1.9
TRM12	YML005W	YPI1	P43587	155 aa		3.15	□□□□□ -1.9
TRM12	YML005W	NUP84	P52891	726 aa		3.15	□□□□□ -1.9
TRM12	YML005W	LSB1	P53281	241 aa		3.15	□□□□□ -1.9
TRM12	YML005W	YET2	Q04210	160 aa		3.15	□□□□□ -1.9
TRM12	YML005W	GAS2	Q06135	555 aa		3.15	□□□□□ -1.9
TRM12	YML005W	RSR1	P13856	272 aa		3.14	□□□□□ -1.91
TRM12	YML005W	POL30	P15873	258 aa	Known RBP	3.14	□□□□□ -1.91
TRM12	YML005W	HPR1	P17629	752 aa	Known RBP	3.14	□□□□□ -1.91
TRM12	YML005W	RVS161	P25343	265 aa	Known RBP	3.14	□□□□□ -1.91
TRM12	YML005W	PET100	P38958	111 aa		3.14	□□□□□ -1.91
TRM12	YML005W	SHQ1	P40486	507 aa	Predicted RBP	3.14	□□□□□ -1.91
TRM12	YML005W	YJR054W	P47114	497 aa		3.14	□□□□□ -1.91
TRM12	YML005W	KEL2	P50090	882 aa		3.14	□□□□□ -1.91
TRM12	YML005W	SHE10	P53075	577 aa		3.14	□□□□□ -1.91
TRM12	YML005W	CWC22	P53333	577 aa	Known RBP	3.14	□□□□□ -1.91
TRM12	YML005W	YNL134C	P53912	376 aa	Known RBP	3.14	□□□□□ -1.91
TRM12	YML005W	YLR177W	Q06251	628 aa		3.14	□□□□□ -1.91
TRM12	YML005W	BER1	Q06688	274 aa	Known RBP	3.14	□□□□□ -1.91
TRM12	YML005W	ASR1	Q06834	288 aa		3.14	□□□□□ -1.91
TRM12	YML005W	HRT3	Q12347	344 aa		3.14	□□□□□ -1.91
TRM12	YML005W	HMS1	Q12398	434 aa		3.14	□□□□□ -1.91
TRM12	YML005W	NUP2	P32499	720 aa		3.13	□□□□□ -1.91
TRM12	YML005W	IME2	P32581	645 aa		3.13	□□□□□ -1.91
TRM12	YML005W	RCK1	P38622	512 aa		3.13	□□□□□ -1.91
TRM12	YML005W	WSC4	P38739	605 aa		3.13	□□□□□ -1.91
TRM12	YML005W	SOP4	P39543	234 aa	Predicted RBP	3.13	□□□□□ -1.91
TRM12	YML005W	TIS11	P47977	285 aa		3.13	□□□□□ -1.91
TRM12	YML005W	CDC14	Q00684	551 aa		3.13	□□□□□ -1.91
TRM12	YML005W	SLT2	Q00772	484 aa		3.13	□□□□□ -1.91
TRM12	YML005W	ENT5	Q03769	411 aa	Known RBP	3.13	□□□□□ -1.91
TRM12	YML005W	CTS2	Q06350	511 aa		3.13	□□□□□ -1.91

Retrieved 100 of 5,963 RNA–protein pairs in 20 ms