RNA–Protein interactions for RNA: YHR027C

RPN1, Transcript of Non-ATPase base subunit of the 19S RP of the 26S proteasome, yeastyeast

Gene RPN1, Length 2,982 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPN1YHR027C MRPL35Q06678 367 aa2.94□□□□□ -1.94
RPN1YHR027C FDH1Q08911 376 aa2.94□□□□□ -1.94
RPN1YHR027C RGT2Q12300 763 aa2.94□□□□□ -1.94
RPN1YHR027C ATG5Q12380 294 aa2.94□□□□□ -1.94
RPN1YHR027C MRX4Q12467 430 aa2.94□□□□□ -1.94
RPN1YHR027C RMD5Q12508 421 aa2.94□□□□□ -1.94
RPN1YHR027C YKL018C-AQ3E7A7 99 aa2.94□□□□□ -1.94
RPN1YHR027C YNR034W-AQ3E841 98 aa2.94□□□□□ -1.94
RPN1YHR027C COA6Q3E846 104 aa2.94□□□□□ -1.94
RPN1YHR027C BI3Q9ZZW7 517 aa2.94□□□□□ -1.94
RPN1YHR027C CDC36P06100 191 aaPredicted RBP2.94□□□□□ -1.94
RPN1YHR027C ADH3P07246 375 aaKnown RBP2.94□□□□□ -1.94
RPN1YHR027C CDC34P14682 295 aa2.94□□□□□ -1.94
RPN1YHR027C AIM17P23180 465 aaKnown RBP2.94□□□□□ -1.94
RPN1YHR027C ADE1P27616 306 aa2.94□□□□□ -1.94
RPN1YHR027C YBR220CP38318 560 aa2.94□□□□□ -1.94
RPN1YHR027C CHS7P38843 316 aa2.94□□□□□ -1.94
RPN1YHR027C HPA3P39979 161 aa2.94□□□□□ -1.94
RPN1YHR027C COG3P40094 801 aa2.94□□□□□ -1.94
RPN1YHR027C SWM2P40342 146 aa2.94□□□□□ -1.94
RPN1YHR027C YIL152WP40455 235 aa2.94□□□□□ -1.94
RPN1YHR027C GDS1P41913 522 aa2.94□□□□□ -1.94
RPN1YHR027C THI12P42883 340 aa2.94□□□□□ -1.94
RPN1YHR027C THI5P43534 340 aa2.94□□□□□ -1.94
RPN1YHR027C YFL052WP43551 465 aa2.94□□□□□ -1.94
RPN1YHR027C YFL012WP43580 148 aa2.94□□□□□ -1.94
RPN1YHR027C ASN1P49089 572 aaKnown RBP2.94□□□□□ -1.94
RPN1YHR027C YGR079WP53249 370 aa2.94□□□□□ -1.94
RPN1YHR027C YAP6Q03935 383 aa2.94□□□□□ -1.94
RPN1YHR027C SPC19Q03954 165 aa2.94□□□□□ -1.94
RPN1YHR027C AIM32Q04689 311 aa2.94□□□□□ -1.94
RPN1YHR027C YLR179CQ06252 201 aaKnown RBP2.94□□□□□ -1.94
RPN1YHR027C COQ10Q08058 207 aa2.94□□□□□ -1.94
RPN1YHR027C REX4Q08237 289 aa2.94□□□□□ -1.94
RPN1YHR027C NYV1Q12255 253 aa2.94□□□□□ -1.94
RPN1YHR027C AHA1Q12449 350 aaKnown RBP2.94□□□□□ -1.94
RPN1YHR027C YOL163WP0CF20 169 aa2.94□□□□□ -1.94
RPN1YHR027C ERD1P16151 362 aa2.94□□□□□ -1.94
RPN1YHR027C PUP1P25043 261 aa2.94□□□□□ -1.94
RPN1YHR027C STE50P25344 346 aa2.94□□□□□ -1.94
RPN1YHR027C ERG1P32476 496 aaKnown RBP2.94□□□□□ -1.94
RPN1YHR027C TMT1P32643 299 aa2.94□□□□□ -1.94
RPN1YHR027C TMA19P35691 167 aaKnown RBP2.94□□□□□ -1.94
RPN1YHR027C YKL151CP36059 337 aa2.94□□□□□ -1.94
RPN1YHR027C VRP1P37370 817 aa2.94□□□□□ -1.94
RPN1YHR027C STS1P38637 319 aa2.94□□□□□ -1.94
RPN1YHR027C EFM1P38732 585 aa2.94□□□□□ -1.94
RPN1YHR027C GLC8P41818 229 aa2.94□□□□□ -1.94
RPN1YHR027C ZAP1P47043 880 aa2.94□□□□□ -1.94
RPN1YHR027C FAA4P47912 694 aaKnown RBP2.94□□□□□ -1.94
RPN1YHR027C RRT6P53117 311 aaPredicted RBP2.94□□□□□ -1.94
RPN1YHR027C PUS2P53167 370 aa2.94□□□□□ -1.94
RPN1YHR027C PEX31P53203 462 aa2.94□□□□□ -1.94
RPN1YHR027C FMP41P53889 259 aaKnown RBP2.94□□□□□ -1.94
RPN1YHR027C ALG11P53954 548 aaKnown RBP2.94□□□□□ -1.94
RPN1YHR027C YDC1Q02896 317 aa2.94□□□□□ -1.94
RPN1YHR027C MRP51Q02950 344 aa2.94□□□□□ -1.94
RPN1YHR027C DIG2Q03373 323 aaKnown RBP2.94□□□□□ -1.94
RPN1YHR027C SPR28Q04921 423 aa2.94□□□□□ -1.94
RPN1YHR027C SRO7Q12038 1033 aa2.94□□□□□ -1.94
RPN1YHR027C LEU9Q12166 604 aaKnown RBP2.94□□□□□ -1.94
RPN1YHR027C WTM1Q12363 437 aaKnown RBP2.94□□□□□ -1.94
RPN1YHR027C TMA17Q12513 150 aa2.94□□□□□ -1.94
RPN1YHR027C YIL134C-AQ45U18 67 aa2.94□□□□□ -1.94
RPN1YHR027C TIM9O74700 87 aa2.93□□□□□ -1.94
RPN1YHR027C SWI5P08153 709 aa2.93□□□□□ -1.94
RPN1YHR027C AFT1P22149 690 aa2.93□□□□□ -1.94
RPN1YHR027C PER1P25625 357 aa2.93□□□□□ -1.94
RPN1YHR027C BCS1P32839 456 aa2.93□□□□□ -1.94
RPN1YHR027C YUH1P35127 236 aa2.93□□□□□ -1.94
RPN1YHR027C COS9P36034 407 aa2.93□□□□□ -1.94
RPN1YHR027C MUP3P38734 546 aa2.93□□□□□ -1.94
RPN1YHR027C YHR035WP38769 630 aa2.93□□□□□ -1.94
RPN1YHR027C MDM31P38880 579 aa2.93□□□□□ -1.94
RPN1YHR027C CKB2P38930 258 aa2.93□□□□□ -1.94
RPN1YHR027C PHO90P39535 881 aa2.93□□□□□ -1.94
RPN1YHR027C ISC1P40015 477 aaKnown RBP2.93□□□□□ -1.94
RPN1YHR027C GIP2P40036 548 aa2.93□□□□□ -1.94
RPN1YHR027C NTA1P40354 457 aa2.93□□□□□ -1.94
RPN1YHR027C PMT6P42934 759 aa2.93□□□□□ -1.94
RPN1YHR027C ATG18P43601 500 aa2.93□□□□□ -1.94
RPN1YHR027C YJR011CP47086 261 aaPredicted RBP2.93□□□□□ -1.94
RPN1YHR027C AIF1P52923 378 aa2.93□□□□□ -1.94
RPN1YHR027C YGL101WP53144 215 aa2.93□□□□□ -1.94
RPN1YHR027C YGR035CP53222 116 aa2.93□□□□□ -1.94
RPN1YHR027C GPI15P53961 229 aa2.93□□□□□ -1.94
RPN1YHR027C GSF2Q04697 403 aaKnown RBP2.93□□□□□ -1.94
RPN1YHR027C YLR326WQ06170 240 aaKnown RBP2.93□□□□□ -1.94
RPN1YHR027C SKG3Q06315 1026 aa2.93□□□□□ -1.94
RPN1YHR027C CRT10Q08226 957 aa2.93□□□□□ -1.94
RPN1YHR027C LEA1Q08963 238 aaPredicted RBP2.93□□□□□ -1.94
RPN1YHR027C POM33Q12164 279 aa2.93□□□□□ -1.94
RPN1YHR027C ADE4P04046 510 aaKnown RBP2.93□□□□□ -1.94
RPN1YHR027C ALY1P36117 915 aa2.93□□□□□ -1.94
RPN1YHR027C FAT1P38225 669 aa2.93□□□□□ -1.94
RPN1YHR027C PNT1P38969 423 aa2.93□□□□□ -1.94
RPN1YHR027C MET28P40573 187 aa2.93□□□□□ -1.94
RPN1YHR027C GWT1P47026 490 aa2.93□□□□□ -1.94
RPN1YHR027C BNA1P47096 177 aa2.93□□□□□ -1.94
RPN1YHR027C NNF1P47149 201 aa2.93□□□□□ -1.94
Retrieved 100 of 5,963 RNA–protein pairs in 145.7 ms