RNA–Protein interactions for RNA: YHR012W

VPS29, Transcript of Subunit of the membrane-associated retromer complex, yeastyeast

Gene VPS29, Length 849 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS29YHR012W NIP7Q08962 181 aaKnown RBP4.31□□□□□ -1.72
VPS29YHR012W ULA1Q12059 462 aa4.31□□□□□ -1.72
VPS29YHR012W YLR122CQ12312 125 aa4.31□□□□□ -1.72
VPS29YHR012W DET1Q99288 334 aaKnown RBP4.31□□□□□ -1.72
VPS29YHR012W URA2P07259 2214 aaKnown RBP4.31□□□□□ -1.72
VPS29YHR012W YOL163WP0CF20 169 aa4.3□□□□□ -1.72
VPS29YHR012W PRP4P20053 465 aaKnown RBP4.3□□□□□ -1.72
VPS29YHR012W NUP1P20676 1076 aa4.3□□□□□ -1.72
VPS29YHR012W PUP1P25043 261 aa4.3□□□□□ -1.72
VPS29YHR012W GFD2P25370 566 aaKnown RBP4.3□□□□□ -1.72
VPS29YHR012W DBF20P32328 564 aa4.3□□□□□ -1.72
VPS29YHR012W HIR2P32480 875 aa4.3□□□□□ -1.72
VPS29YHR012W TRS65P32893 560 aa4.3□□□□□ -1.72
VPS29YHR012W SOF1P33750 489 aaKnown RBP4.3□□□□□ -1.72
VPS29YHR012W SWH1P35845 1188 aa4.3□□□□□ -1.72
VPS29YHR012W MED8P38304 223 aa4.3□□□□□ -1.72
VPS29YHR012W YBR220CP38318 560 aa4.3□□□□□ -1.72
VPS29YHR012W TSL1P38427 1098 aaKnown RBP4.3□□□□□ -1.72
VPS29YHR012W YHR097CP38809 366 aaKnown RBP4.3□□□□□ -1.72
VPS29YHR012W MTW1P39731 289 aa4.3□□□□□ -1.72
VPS29YHR012W YIL165CP40446 119 aa4.3□□□□□ -1.72
VPS29YHR012W MPC1P53157 130 aaKnown RBP4.3□□□□□ -1.72
VPS29YHR012W PCP1P53259 346 aa4.3□□□□□ -1.72
VPS29YHR012W COG2P53271 262 aa4.3□□□□□ -1.72
VPS29YHR012W YGR126WP53274 230 aa4.3□□□□□ -1.72
VPS29YHR012W LAP3Q01532 483 aaKnown RBP RIP-Chip data4.3□□□□□ -1.72not detected
VPS29YHR012W RPL6AQ02326 176 aaKnown RBP4.3□□□□□ -1.72
VPS29YHR012W KAP120Q02932 1032 aa4.3□□□□□ -1.72
VPS29YHR012W SPC24Q04477 213 aa4.3□□□□□ -1.72
VPS29YHR012W COQ11Q05892 277 aa4.3□□□□□ -1.72
VPS29YHR012W COQ10Q08058 207 aa4.3□□□□□ -1.72
VPS29YHR012W DIA2Q08496 732 aaPredicted RBP4.3□□□□□ -1.72
VPS29YHR012W GEP5Q12393 293 aa4.3□□□□□ -1.72
VPS29YHR012W Q0297Q9ZZV8 51 aa4.3□□□□□ -1.72
VPS29YHR012W RAD7P06779 565 aa4.29□□□□□ -1.72
VPS29YHR012W SPO7P18410 259 aa4.29□□□□□ -1.72
VPS29YHR012W HSP30P25619 332 aa4.29□□□□□ -1.72
VPS29YHR012W ITR1P30605 584 aa4.29□□□□□ -1.72
VPS29YHR012W MSN4P33749 630 aa4.29□□□□□ -1.72
VPS29YHR012W YKL187CP34231 750 aa4.29□□□□□ -1.72
VPS29YHR012W ECM15P35195 104 aa4.29□□□□□ -1.72
VPS29YHR012W RRP4P38792 359 aaKnown RBP4.29□□□□□ -1.72
VPS29YHR012W ERP5P38819 212 aa4.29□□□□□ -1.72
VPS29YHR012W RSP5P39940 809 aaKnown RBP4.29□□□□□ -1.72
VPS29YHR012W YNL208WP40159 199 aaKnown RBP4.29□□□□□ -1.72
VPS29YHR012W QRI1P43123 477 aaKnown RBP4.29□□□□□ -1.72
VPS29YHR012W TMA22P47089 198 aaPredicted RBP4.29□□□□□ -1.72
VPS29YHR012W MDE1P47095 244 aa4.29□□□□□ -1.72
VPS29YHR012W YNL181WP53878 407 aa4.29□□□□□ -1.72
VPS29YHR012W GTR1Q00582 310 aa4.29□□□□□ -1.72
VPS29YHR012W RCE1Q03530 315 aa4.29□□□□□ -1.72
VPS29YHR012W YAP6Q03935 383 aa4.29□□□□□ -1.72
VPS29YHR012W ARO10Q06408 635 aa4.29□□□□□ -1.72
VPS29YHR012W YPR127WQ06494 345 aa4.29□□□□□ -1.72
VPS29YHR012W BRE4Q07660 1125 aa4.29□□□□□ -1.72
VPS29YHR012W YPR202WQ08993 238 aa4.29□□□□□ -1.72
VPS29YHR012W RTC5Q12108 567 aaKnown RBP4.29□□□□□ -1.72
VPS29YHR012W RLM1Q12224 676 aa4.29□□□□□ -1.72
VPS29YHR012W RIB2Q12362 591 aaKnown RBP4.29□□□□□ -1.72
VPS29YHR012W YDL199CQ12407 687 aa4.29□□□□□ -1.72
VPS29YHR012W MHF2Q3E829 80 aa4.29□□□□□ -1.72
VPS29YHR012W DFG16Q99234 619 aa4.29□□□□□ -1.72
VPS29YHR012W ITR2P30606 609 aa4.28□□□□□ -1.72
VPS29YHR012W SAC1P32368 623 aaKnown RBP4.28□□□□□ -1.72
VPS29YHR012W ARP2P32381 391 aaKnown RBP4.28□□□□□ -1.72
VPS29YHR012W PPG1P32838 368 aa4.28□□□□□ -1.72
VPS29YHR012W HCS1P34243 683 aa4.28□□□□□ -1.72
VPS29YHR012W JEN1P36035 616 aa4.28□□□□□ -1.72
VPS29YHR012W RFC3P38629 340 aa4.28□□□□□ -1.72
VPS29YHR012W FET3P38993 636 aa4.28□□□□□ -1.72
VPS29YHR012W RCY1P39531 840 aa4.28□□□□□ -1.72
VPS29YHR012W GCN20P43535 752 aaKnown RBP4.28□□□□□ -1.72
VPS29YHR012W MOB2P43563 287 aa4.28□□□□□ -1.72
VPS29YHR012W ADO1P47143 340 aaKnown RBP4.28□□□□□ -1.72
VPS29YHR012W GPI8P49018 411 aa4.28□□□□□ -1.72
VPS29YHR012W TOS2P50078 622 aa4.28□□□□□ -1.72
VPS29YHR012W DAM1P53267 343 aa4.28□□□□□ -1.72
VPS29YHR012W DSL1P53847 754 aa4.28□□□□□ -1.72
VPS29YHR012W TEX1P53851 422 aaKnown RBP4.28□□□□□ -1.72
VPS29YHR012W IGO1P53897 168 aa4.28□□□□□ -1.72
VPS29YHR012W YKR011CQ02209 353 aa4.28□□□□□ -1.72
VPS29YHR012W NUP116Q02630 1113 aa4.28□□□□□ -1.72
VPS29YHR012W RSA3Q05942 220 aaKnown RBP4.28□□□□□ -1.72
VPS29YHR012W YPR147CQ06522 304 aaKnown RBP4.28□□□□□ -1.72
VPS29YHR012W SET6Q12529 373 aa4.28□□□□□ -1.72
VPS29YHR012W CNA1P23287 553 aa4.27□□□□□ -1.73
VPS29YHR012W RER1P25560 188 aa4.27□□□□□ -1.73
VPS29YHR012W CAM1P29547 415 aaKnown RBP4.27□□□□□ -1.73
VPS29YHR012W THI4P32318 326 aa4.27□□□□□ -1.73
VPS29YHR012W DGR2P32330 852 aa4.27□□□□□ -1.73
VPS29YHR012W MCM10P32354 571 aa4.27□□□□□ -1.73
VPS29YHR012W TIM12P32830 109 aa4.27□□□□□ -1.73
VPS29YHR012W MDL1P33310 695 aa4.27□□□□□ -1.73
VPS29YHR012W MRP8P35719 219 aa4.27□□□□□ -1.73
VPS29YHR012W COS9P36034 407 aa4.27□□□□□ -1.73
VPS29YHR012W MTC6P38849 526 aa4.27□□□□□ -1.73
VPS29YHR012W PEX18P38855 283 aa4.27□□□□□ -1.73
VPS29YHR012W GDI1P39958 451 aaKnown RBP4.27□□□□□ -1.73
VPS29YHR012W YER184CP39961 794 aa4.27□□□□□ -1.73
VPS29YHR012W YFL051CP43552 160 aa4.27□□□□□ -1.73
Retrieved 100 of 5,963 RNA–protein pairs in 70.2 ms