RNA–Protein interactions for RNA: YFR001W

LOC1, Nuclear protein involved in asymmetric localization of ASH1 mRNA, yeastyeast

Gene LOC1, Length 615 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LOC1YFR001W SAL1D6W196 494 aa2.36□□□□□ -2.03
LOC1YFR001W DCC1P25559 380 aa2.36□□□□□ -2.03
LOC1YFR001W CIN8P27895 1000 aa2.36□□□□□ -2.03
LOC1YFR001W VPH1P32563 840 aaKnown RBP2.36□□□□□ -2.03
LOC1YFR001W YEL043WP32618 956 aa2.36□□□□□ -2.03
LOC1YFR001W EFM1P38732 585 aa2.36□□□□□ -2.03
LOC1YFR001W PRP39P39682 629 aaKnown RBP2.36□□□□□ -2.03
LOC1YFR001W UFE1P41834 346 aa2.36□□□□□ -2.03
LOC1YFR001W NAS6P50086 228 aa2.36□□□□□ -2.03
LOC1YFR001W NRM1P53718 249 aa2.36□□□□□ -2.03
LOC1YFR001W PDR16P53860 351 aaKnown RBP2.36□□□□□ -2.03
LOC1YFR001W FAR10Q06001 478 aa2.36□□□□□ -2.03
LOC1YFR001W RGS2Q99188 309 aa2.36□□□□□ -2.03
LOC1YFR001W FLO11P08640 1367 aa2.36□□□□□ -2.03
LOC1YFR001W COX10P21592 462 aa2.35□□□□□ -2.03
LOC1YFR001W MYO3P36006 1272 aa2.35□□□□□ -2.03
LOC1YFR001W TRR2P38816 342 aa2.35□□□□□ -2.03
LOC1YFR001W BTT1P40314 149 aaPredicted RBP2.35□□□□□ -2.03
LOC1YFR001W YIL089WP40500 205 aa2.35□□□□□ -2.03
LOC1YFR001W NAS2P40555 220 aa2.35□□□□□ -2.03
LOC1YFR001W YGL114WP53134 725 aa2.35□□□□□ -2.03
LOC1YFR001W SPH1Q06160 661 aa2.35□□□□□ -2.03
LOC1YFR001W SPO24Q3E752 67 aa2.35□□□□□ -2.03
LOC1YFR001W SKG6P32900 734 aaPredicted RBP2.34□□□□□ -2.03
LOC1YFR001W UIP5P36137 443 aa2.34□□□□□ -2.03
LOC1YFR001W YIR035CP40579 254 aa2.34□□□□□ -2.03
LOC1YFR001W TPC1P53257 314 aa2.34□□□□□ -2.03
LOC1YFR001W HCH1P53834 153 aa2.34□□□□□ -2.03
LOC1YFR001W YNL146WP53906 100 aa2.34□□□□□ -2.03
LOC1YFR001W APC4Q04601 652 aa2.34□□□□□ -2.03
LOC1YFR001W YPR195CQ06594 109 aa2.34□□□□□ -2.03
LOC1YFR001W YPS3Q12303 508 aa2.34□□□□□ -2.03
LOC1YFR001W VPS63O13549 108 aa2.33□□□□□ -2.04
LOC1YFR001W REP1P03871 373 aa2.33□□□□□ -2.04
LOC1YFR001W CKA2P19454 339 aa2.33□□□□□ -2.04
LOC1YFR001W SMI1P32566 505 aa2.33□□□□□ -2.04
LOC1YFR001W SMF2P38778 549 aa2.33□□□□□ -2.04
LOC1YFR001W FYV8P46949 817 aaKnown RBP2.33□□□□□ -2.04
LOC1YFR001W PXR1P53335 271 aaPredicted RBP2.33□□□□□ -2.04
LOC1YFR001W ZRG17P53735 605 aa2.33□□□□□ -2.04
LOC1YFR001W INP1Q03694 420 aa2.33□□□□□ -2.04
LOC1YFR001W INP2Q03824 705 aa2.33□□□□□ -2.04
LOC1YFR001W MHP1P43638 1398 aa2.33□□□□□ -2.04
LOC1YFR001W AGA2P32781 87 aa2.32□□□□□ -2.04
LOC1YFR001W CBF5P33322 483 aaKnown RBP RIP-Chip data2.32□□□□□ -2.04not detected
LOC1YFR001W LIN1P38852 340 aaPredicted RBP2.32□□□□□ -2.04
LOC1YFR001W BDH1P39714 382 aa2.32□□□□□ -2.04
LOC1YFR001W RRG9P40156 214 aa2.32□□□□□ -2.04
LOC1YFR001W CPR7P47103 393 aa2.32□□□□□ -2.04
LOC1YFR001W TAF6P53040 516 aa2.32□□□□□ -2.04
LOC1YFR001W UTP15Q04305 513 aaKnown RBP2.32□□□□□ -2.04
LOC1YFR001W YDL211CQ12121 372 aa2.32□□□□□ -2.04
LOC1YFR001W RFM1Q12192 310 aa2.32□□□□□ -2.04
LOC1YFR001W YDR262WQ12331 272 aa2.32□□□□□ -2.04
LOC1YFR001W SPT7P35177 1332 aa2.32□□□□□ -2.04
LOC1YFR001W CTA1P15202 515 aa2.31□□□□□ -2.04
LOC1YFR001W RBK1P25332 333 aa2.31□□□□□ -2.04
LOC1YFR001W KTI12P34253 313 aaKnown RBP2.31□□□□□ -2.04
LOC1YFR001W AST1P35183 429 aa2.31□□□□□ -2.04
LOC1YFR001W HIT1P46973 164 aa2.31□□□□□ -2.04
LOC1YFR001W YMR244WQ04018 355 aa2.31□□□□□ -2.04
LOC1YFR001W ECM19Q06011 112 aa2.31□□□□□ -2.04
LOC1YFR001W BI3Q9ZZW7 517 aa2.31□□□□□ -2.04
LOC1YFR001W VMA5P31412 392 aaKnown RBP2.3□□□□□ -2.04
LOC1YFR001W IME2P32581 645 aa2.3□□□□□ -2.04
LOC1YFR001W YKL187CP34231 750 aa2.3□□□□□ -2.04
LOC1YFR001W ZRT3P34240 503 aa2.3□□□□□ -2.04
LOC1YFR001W RFT1P38206 574 aaPredicted RBP2.3□□□□□ -2.04
LOC1YFR001W RCK1P38622 512 aa2.3□□□□□ -2.04
LOC1YFR001W CAJ1P39101 391 aa2.3□□□□□ -2.04
LOC1YFR001W COS4P43542 379 aa2.3□□□□□ -2.04
LOC1YFR001W PMT4P46971 762 aa2.3□□□□□ -2.04
LOC1YFR001W SDS23P53172 527 aa2.3□□□□□ -2.04
LOC1YFR001W YGR016WP53209 190 aa2.3□□□□□ -2.04
LOC1YFR001W FMP48P53233 369 aa2.3□□□□□ -2.04
LOC1YFR001W GMC1Q04399 608 aa2.3□□□□□ -2.04
LOC1YFR001W YDR286CQ05530 114 aa2.3□□□□□ -2.04
LOC1YFR001W MRX9Q07349 420 aaKnown RBP2.3□□□□□ -2.04
LOC1YFR001W RDL2Q08742 149 aaKnown RBP2.3□□□□□ -2.04
LOC1YFR001W DFM1Q12743 341 aaKnown RBP2.3□□□□□ -2.04
LOC1YFR001W RNR2P09938 399 aaKnown RBP2.29□□□□□ -2.04
LOC1YFR001W SPS100P13130 326 aa2.29□□□□□ -2.04
LOC1YFR001W CPT1P17898 393 aa2.29□□□□□ -2.04
LOC1YFR001W RPB9P27999 122 aa2.29□□□□□ -2.04
LOC1YFR001W YMR262WP38430 313 aa2.29□□□□□ -2.04
LOC1YFR001W DSE1P40077 573 aa2.29□□□□□ -2.04
LOC1YFR001W MIC19P43594 170 aa2.29□□□□□ -2.04
LOC1YFR001W SHE4P51534 789 aa2.29□□□□□ -2.04
LOC1YFR001W SMD1Q02260 146 aaPredicted RBP2.29□□□□□ -2.04
LOC1YFR001W RVB1Q03940 463 aaKnown RBP2.29□□□□□ -2.04
LOC1YFR001W BUR2Q05949 395 aa2.29□□□□□ -2.04
LOC1YFR001W DIB1Q06819 143 aaPredicted RBP2.29□□□□□ -2.04
LOC1YFR001W MIM1Q08176 113 aa2.29□□□□□ -2.04
LOC1YFR001W PGC1Q08959 321 aa2.29□□□□□ -2.04
LOC1YFR001W PRM4Q12498 284 aa2.29□□□□□ -2.04
LOC1YFR001W RPL18AP0CX49 186 aaKnown RBP2.28□□□□□ -2.04
LOC1YFR001W RPL18BP0CX50 186 aaKnown RBP2.28□□□□□ -2.04
LOC1YFR001W GAL3P13045 520 aa2.28□□□□□ -2.04
LOC1YFR001W CUP2P15315 225 aa2.28□□□□□ -2.04
LOC1YFR001W ITR2P30606 609 aa2.28□□□□□ -2.04
Retrieved 100 of 5,963 RNA–protein pairs in 27.4 ms