RNA–Protein interactions for RNA: YDR484W

VPS52, Transcript of Component of the GARP (Golgi-associated retrograde protein) complex, yeastyeast

Gene VPS52, Length 1,926 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS52YDR484W YFR018CP43599 363 aa1.7□□□□□ -2.14
VPS52YDR484W HIT1P46973 164 aa1.7□□□□□ -2.14
VPS52YDR484W YGL114WP53134 725 aa1.7□□□□□ -2.14
VPS52YDR484W PDR16P53860 351 aaKnown RBP1.7□□□□□ -2.14
VPS52YDR484W SCS7Q03529 384 aa1.7□□□□□ -2.14
VPS52YDR484W TAF10Q12030 206 aa1.7□□□□□ -2.14
VPS52YDR484W SLF1Q12034 447 aaKnown RBP1.7□□□□□ -2.14
VPS52YDR484W RPN6Q12377 434 aa1.7□□□□□ -2.14
VPS52YDR484W PRM7Q12459 698 aa1.7□□□□□ -2.14
VPS52YDR484W VPS63O13549 108 aa1.7□□□□□ -2.14
VPS52YDR484W CTA1P15202 515 aa1.7□□□□□ -2.14
VPS52YDR484W FUS3P16892 353 aaKnown RBP1.7□□□□□ -2.14
VPS52YDR484W RBK1P25332 333 aa1.7□□□□□ -2.14
VPS52YDR484W SMI1P32566 505 aa1.7□□□□□ -2.14
VPS52YDR484W MYO3P36006 1272 aa1.7□□□□□ -2.14
VPS52YDR484W DBP7P36120 742 aaKnown RBP1.7□□□□□ -2.14
VPS52YDR484W TRR2P38816 342 aa1.7□□□□□ -2.14
VPS52YDR484W BTT1P40314 149 aaPredicted RBP1.7□□□□□ -2.14
VPS52YDR484W NAS6P50086 228 aa1.7□□□□□ -2.14
VPS52YDR484W HST4P53688 370 aa1.7□□□□□ -2.14
VPS52YDR484W APC4Q04601 652 aa1.7□□□□□ -2.14
VPS52YDR484W FAR10Q06001 478 aa1.7□□□□□ -2.14
VPS52YDR484W PML1Q07930 204 aaPredicted RBP1.7□□□□□ -2.14
VPS52YDR484W TAE1P38340 232 aa1.69□□□□□ -2.14
VPS52YDR484W MHP1P43638 1398 aa1.69□□□□□ -2.14
VPS52YDR484W UTP15Q04305 513 aaKnown RBP1.69□□□□□ -2.14
VPS52YDR484W SPH1Q06160 661 aa1.69□□□□□ -2.14
VPS52YDR484W PSY3Q12318 242 aa1.69□□□□□ -2.14
VPS52YDR484W APC2Q12440 853 aa1.69□□□□□ -2.14
VPS52YDR484W RNR2P09938 399 aaKnown RBP1.68□□□□□ -2.14
VPS52YDR484W ITR2P30606 609 aa1.68□□□□□ -2.14
VPS52YDR484W VMA5P31412 392 aaKnown RBP1.68□□□□□ -2.14
VPS52YDR484W CYM1P32898 989 aa1.68□□□□□ -2.14
VPS52YDR484W SKG6P32900 734 aaPredicted RBP1.68□□□□□ -2.14
VPS52YDR484W KTI12P34253 313 aaKnown RBP1.68□□□□□ -2.14
VPS52YDR484W FRM2P37261 193 aa1.68□□□□□ -2.14
VPS52YDR484W FYV8P46949 817 aaKnown RBP1.68□□□□□ -2.14
VPS52YDR484W TAF6P53040 516 aa1.68□□□□□ -2.14
VPS52YDR484W INP2Q03824 705 aa1.68□□□□□ -2.14
VPS52YDR484W YDR262WQ12331 272 aa1.68□□□□□ -2.14
VPS52YDR484W SPO24Q3E752 67 aa1.68□□□□□ -2.14
VPS52YDR484W ACB1P31787 87 aa1.68□□□□□ -2.14
VPS52YDR484W MEI5P32489 222 aa1.68□□□□□ -2.14
VPS52YDR484W CAJ1P39101 391 aa1.68□□□□□ -2.14
VPS52YDR484W YGR016WP53209 190 aa1.68□□□□□ -2.14
VPS52YDR484W RVB1Q03940 463 aaKnown RBP1.68□□□□□ -2.14
VPS52YDR484W VTI1Q04338 217 aa1.68□□□□□ -2.14
VPS52YDR484W DTD1Q07648 150 aaKnown RBP1.68□□□□□ -2.14
VPS52YDR484W YDR018CQ12185 396 aa1.68□□□□□ -2.14
VPS52YDR484W PRM4Q12498 284 aa1.68□□□□□ -2.14
VPS52YDR484W FLO11P08640 1367 aa1.67□□□□□ -2.14
VPS52YDR484W CBF5P33322 483 aaKnown RBP RIP-Chip data1.67□□□□□ -2.14not detected
VPS52YDR484W SMF2P38778 549 aa1.67□□□□□ -2.14
VPS52YDR484W LIN1P38852 340 aaPredicted RBP1.67□□□□□ -2.14
VPS52YDR484W MIC19P43594 170 aa1.67□□□□□ -2.14
VPS52YDR484W PXR1P53335 271 aaPredicted RBP1.67□□□□□ -2.14
VPS52YDR484W GMC1Q04399 608 aa1.67□□□□□ -2.14
VPS52YDR484W BUR2Q05949 395 aa1.67□□□□□ -2.14
VPS52YDR484W YPR195CQ06594 109 aa1.67□□□□□ -2.14
VPS52YDR484W YPS3Q12303 508 aa1.67□□□□□ -2.14
VPS52YDR484W REP1P03871 373 aa1.66□□□□□ -2.14
VPS52YDR484W YKL187CP34231 750 aa1.66□□□□□ -2.14
VPS52YDR484W RFT1P38206 574 aaPredicted RBP1.66□□□□□ -2.14
VPS52YDR484W YIL054WP40524 105 aa1.66□□□□□ -2.14
VPS52YDR484W NAS2P40555 220 aa1.66□□□□□ -2.14
VPS52YDR484W ZRG17P53735 605 aa1.66□□□□□ -2.14
VPS52YDR484W INP1Q03694 420 aa1.66□□□□□ -2.14
VPS52YDR484W MRX9Q07349 420 aaKnown RBP1.66□□□□□ -2.14
VPS52YDR484W AST1P35183 429 aa1.66□□□□□ -2.14
VPS52YDR484W PRY2P36110 329 aa1.66□□□□□ -2.14
VPS52YDR484W BDH1P39714 382 aa1.66□□□□□ -2.14
VPS52YDR484W RDL2Q08742 149 aaKnown RBP1.66□□□□□ -2.14
VPS52YDR484W PGC1Q08959 321 aa1.66□□□□□ -2.14
VPS52YDR484W YDL211CQ12121 372 aa1.66□□□□□ -2.14
VPS52YDR484W SAL1D6W196 494 aa1.65□□□□□ -2.15
VPS52YDR484W GAL3P13045 520 aa1.65□□□□□ -2.15
VPS52YDR484W VMA2P16140 517 aaKnown RBP1.65□□□□□ -2.15
VPS52YDR484W COX10P21592 462 aa1.65□□□□□ -2.15
VPS52YDR484W OPI1P21957 404 aa1.65□□□□□ -2.15
VPS52YDR484W CTM1P38818 585 aa1.65□□□□□ -2.15
VPS52YDR484W RRG9P40156 214 aa1.65□□□□□ -2.15
VPS52YDR484W PMT4P46971 762 aa1.65□□□□□ -2.15
VPS52YDR484W SHE4P51534 789 aa1.65□□□□□ -2.15
VPS52YDR484W SDS23P53172 527 aa1.65□□□□□ -2.15
VPS52YDR484W FMP48P53233 369 aa1.65□□□□□ -2.15
VPS52YDR484W TPC1P53257 314 aa1.65□□□□□ -2.15
VPS52YDR484W YGR168CP53293 376 aa1.65□□□□□ -2.15
VPS52YDR484W YDR286CQ05530 114 aa1.65□□□□□ -2.15
VPS52YDR484W YPL245WQ12179 454 aaKnown RBP1.65□□□□□ -2.15
VPS52YDR484W CUP2P15315 225 aa1.64□□□□□ -2.15
VPS52YDR484W CPT1P17898 393 aa1.64□□□□□ -2.15
VPS52YDR484W BUD2P33314 1104 aa1.64□□□□□ -2.15
VPS52YDR484W ZRT3P34240 503 aa1.64□□□□□ -2.15
VPS52YDR484W CPR7P47103 393 aa1.64□□□□□ -2.15
VPS52YDR484W SMD1Q02260 146 aaPredicted RBP1.64□□□□□ -2.15
VPS52YDR484W YMR244WQ04018 355 aa1.64□□□□□ -2.15
VPS52YDR484W ECM19Q06011 112 aa1.64□□□□□ -2.15
VPS52YDR484W DIB1Q06819 143 aaPredicted RBP1.64□□□□□ -2.15
VPS52YDR484W YLR012CQ07927 99 aa1.64□□□□□ -2.15
VPS52YDR484W DFM1Q12743 341 aaKnown RBP1.64□□□□□ -2.15
Retrieved 100 of 5,963 RNA–protein pairs in 81.7 ms