RNA–Protein interactions for RNA: YDR334W

SWR1, Transcript of Swi2/Snf2-related ATPase, yeastyeast

Gene SWR1, Length 4,545 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SWR1YDR334W PMR1P13586 950 aa2.31□□□□□ -2.04
SWR1YDR334W ITR1P30605 584 aa2.31□□□□□ -2.04
SWR1YDR334W PMT2P31382 759 aa2.31□□□□□ -2.04
SWR1YDR334W PHO11P35842 467 aa2.31□□□□□ -2.04
SWR1YDR334W PHO12P38693 467 aa2.31□□□□□ -2.04
SWR1YDR334W SFB3P38810 929 aa2.31□□□□□ -2.04
SWR1YDR334W FAA2P39518 744 aa2.31□□□□□ -2.04
SWR1YDR334W YND1P40009 630 aa2.31□□□□□ -2.04
SWR1YDR334W VMA21P41806 77 aa2.31□□□□□ -2.04
SWR1YDR334W SAE2P46946 345 aa2.31□□□□□ -2.04
SWR1YDR334W RPE1P46969 238 aa2.31□□□□□ -2.04
SWR1YDR334W CTR1P49573 406 aa2.31□□□□□ -2.04
SWR1YDR334W IPI3P53877 555 aa2.31□□□□□ -2.04
SWR1YDR334W CRZ1P53968 678 aa2.31□□□□□ -2.04
SWR1YDR334W NUP49Q02199 472 aa2.31□□□□□ -2.04
SWR1YDR334W NHP10Q03435 203 aa2.31□□□□□ -2.04
SWR1YDR334W SCS7Q03529 384 aa2.31□□□□□ -2.04
SWR1YDR334W URH1Q04179 340 aa2.31□□□□□ -2.04
SWR1YDR334W ECM22Q05958 814 aaPredicted RBP2.31□□□□□ -2.04
SWR1YDR334W COS7Q07788 383 aa2.31□□□□□ -2.04
SWR1YDR334W YPR202WQ08993 238 aa2.31□□□□□ -2.04
SWR1YDR334W PCD1Q12524 340 aa2.31□□□□□ -2.04
SWR1YDR334W HTZ1Q12692 134 aaKnown RBP2.31□□□□□ -2.04
SWR1YDR334W EPT1P22140 391 aa2.31□□□□□ -2.04
SWR1YDR334W IME2P32581 645 aa2.31□□□□□ -2.04
SWR1YDR334W ALK2P32789 676 aaPredicted RBP2.31□□□□□ -2.04
SWR1YDR334W LHP1P33399 275 aaKnown RBP2.31□□□□□ -2.04
SWR1YDR334W AIM29P36154 155 aa2.31□□□□□ -2.04
SWR1YDR334W MPM1P40364 252 aa2.31□□□□□ -2.04
SWR1YDR334W PAN6P40459 309 aa2.31□□□□□ -2.04
SWR1YDR334W SMK1P41808 388 aa2.31□□□□□ -2.04
SWR1YDR334W MPA43P53583 542 aaPredicted RBP2.31□□□□□ -2.04
SWR1YDR334W YPL108WQ02872 168 aaPredicted RBP2.31□□□□□ -2.04
SWR1YDR334W DSE3Q08729 430 aa2.31□□□□□ -2.04
SWR1YDR334W THP2O13539 261 aaKnown RBP2.31□□□□□ -2.04
SWR1YDR334W RAD10P06838 210 aa2.31□□□□□ -2.04
SWR1YDR334W SPO7P18410 259 aa2.31□□□□□ -2.04
SWR1YDR334W CPR4P25334 318 aa2.31□□□□□ -2.04
SWR1YDR334W ITR2P30606 609 aa2.31□□□□□ -2.04
SWR1YDR334W GMH1P36125 273 aa2.31□□□□□ -2.04
SWR1YDR334W YHR210CP38893 341 aa2.31□□□□□ -2.04
SWR1YDR334W DHH1P39517 506 aaKnown RBP2.31□□□□□ -2.04
SWR1YDR334W EDC3P39998 551 aaKnown RBP2.31□□□□□ -2.04
SWR1YDR334W FKH2P41813 862 aa2.31□□□□□ -2.04
SWR1YDR334W RPS10BP46784 105 aaKnown RBP2.31□□□□□ -2.04
SWR1YDR334W GUF1P46943 645 aa2.31□□□□□ -2.04
SWR1YDR334W DUO1P53168 247 aaKnown RBP2.31□□□□□ -2.04
SWR1YDR334W YGR042WP53227 271 aa2.31□□□□□ -2.04
SWR1YDR334W RHO4Q00246 291 aa2.31□□□□□ -2.04
SWR1YDR334W GRX8Q05926 109 aa2.31□□□□□ -2.04
SWR1YDR334W THP1Q08231 455 aa2.31□□□□□ -2.04
SWR1YDR334W RCN2Q12044 265 aa2.31□□□□□ -2.04
SWR1YDR334W MLH3Q12083 715 aa2.31□□□□□ -2.04
SWR1YDR334W YPL245WQ12179 454 aaKnown RBP2.31□□□□□ -2.04
SWR1YDR334W FRE6Q12473 712 aa2.31□□□□□ -2.04
SWR1YDR334W YER175W-AQ8TGU4 54 aa2.31□□□□□ -2.04
SWR1YDR334W MSF1P08425 469 aa2.3□□□□□ -2.04
SWR1YDR334W TCP1P12612 559 aaKnown RBP2.3□□□□□ -2.04
SWR1YDR334W SAM2P19358 384 aaKnown RBP2.3□□□□□ -2.04
SWR1YDR334W RPI1P23250 407 aaKnown RBP2.3□□□□□ -2.04
SWR1YDR334W LCB1P25045 558 aaKnown RBP2.3□□□□□ -2.04
SWR1YDR334W HMX1P32339 317 aa2.3□□□□□ -2.04
SWR1YDR334W VBA2P38358 474 aaKnown RBP2.3□□□□□ -2.04
SWR1YDR334W YHR033WP38690 423 aa2.3□□□□□ -2.04
SWR1YDR334W HAT2P39984 401 aa2.3□□□□□ -2.04
SWR1YDR334W HMF1P40037 129 aaKnown RBP2.3□□□□□ -2.04
SWR1YDR334W IST3P40565 148 aaPredicted RBP2.3□□□□□ -2.04
SWR1YDR334W ARP3P47117 449 aaKnown RBP2.3□□□□□ -2.04
SWR1YDR334W YPR098CQ06089 161 aa2.3□□□□□ -2.04
SWR1YDR334W HBT1Q07653 1046 aaKnown RBP2.3□□□□□ -2.04
SWR1YDR334W IRC25Q07951 179 aa2.3□□□□□ -2.04
SWR1YDR334W DIS3Q08162 1001 aaKnown RBP2.3□□□□□ -2.04
SWR1YDR334W PER33Q12144 273 aa2.3□□□□□ -2.04
SWR1YDR334W YOL107WQ12239 342 aa2.3□□□□□ -2.04
SWR1YDR334W SFM1Q12314 213 aa2.3□□□□□ -2.04
SWR1YDR334W JLP1Q12358 412 aa2.3□□□□□ -2.04
SWR1YDR334W AHA1Q12449 350 aaKnown RBP2.3□□□□□ -2.04
SWR1YDR334W YOR192C-CQ3E736 78 aa2.3□□□□□ -2.04
SWR1YDR334W YJR112W-AQ3E743 109 aa2.3□□□□□ -2.04
SWR1YDR334W YCL021W-AQ96VH3 125 aa2.3□□□□□ -2.04
SWR1YDR334W HTL1Q9URQ5 78 aa2.3□□□□□ -2.04
SWR1YDR334W TPI1P00942 248 aaKnown RBP2.3□□□□□ -2.04
SWR1YDR334W POX1P13711 748 aa2.3□□□□□ -2.04
SWR1YDR334W CBF1P17106 351 aa2.3□□□□□ -2.04
SWR1YDR334W SNF6P18888 332 aa2.3□□□□□ -2.04
SWR1YDR334W RIT1P23796 513 aa2.3□□□□□ -2.04
SWR1YDR334W SLM5P25345 492 aaKnown RBP2.3□□□□□ -2.04
SWR1YDR334W CTR86P25355 563 aa2.3□□□□□ -2.04
SWR1YDR334W RAD51P25454 400 aa2.3□□□□□ -2.04
SWR1YDR334W POF1P25576 258 aa2.3□□□□□ -2.04
SWR1YDR334W URK1P27515 501 aa2.3□□□□□ -2.04
SWR1YDR334W BEM1P29366 551 aa2.3□□□□□ -2.04
SWR1YDR334W PTM1P32857 523 aa2.3□□□□□ -2.04
SWR1YDR334W TKL2P33315 681 aa2.3□□□□□ -2.04
SWR1YDR334W CPR5P35176 225 aa2.3□□□□□ -2.04
SWR1YDR334W NAT2P37293 288 aa2.3□□□□□ -2.04
SWR1YDR334W YPT35P38815 214 aaKnown RBP2.3□□□□□ -2.04
SWR1YDR334W DSD1P53095 428 aa2.3□□□□□ -2.04
SWR1YDR334W YNL260CP53846 198 aa2.3□□□□□ -2.04
SWR1YDR334W LAP3Q01532 483 aaKnown RBP RIP-Chip data2.3□□□□□ -2.04not detected
Retrieved 100 of 5,963 RNA–protein pairs in 42.1 ms