RNA–Protein interactions for RNA: YDR192C

NUP42, Transcript of FG-nucleoporin component of central core of the nuclear pore complex, yeastyeast

Gene NUP42, Length 1,293 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NUP42YDR192C BUB2P26448 306 aaPredicted RBP4.25□□□□□ -1.73
NUP42YDR192C PPZ1P26570 692 aa4.25□□□□□ -1.73
NUP42YDR192C FUN19P28003 413 aaPredicted RBP4.25□□□□□ -1.73
NUP42YDR192C BRF1P29056 596 aa4.25□□□□□ -1.73
NUP42YDR192C PTM1P32857 523 aa4.25□□□□□ -1.73
NUP42YDR192C SIP2P34164 415 aaKnown RBP4.25□□□□□ -1.73
NUP42YDR192C YCR087C-AP37263 153 aa4.25□□□□□ -1.73
NUP42YDR192C BMT2P38278 337 aa4.25□□□□□ -1.73
NUP42YDR192C CYC2P38909 366 aa4.25□□□□□ -1.73
NUP42YDR192C DHH1P39517 506 aaKnown RBP4.25□□□□□ -1.73
NUP42YDR192C VPS52P39904 641 aa4.25□□□□□ -1.73
NUP42YDR192C YJL070CP40361 888 aa4.25□□□□□ -1.73
NUP42YDR192C COA1P40452 197 aa4.25□□□□□ -1.73
NUP42YDR192C CHS6P40955 746 aa4.25□□□□□ -1.73
NUP42YDR192C SEC27P41811 889 aaKnown RBP4.25□□□□□ -1.73
NUP42YDR192C GCD10P41814 478 aa4.25□□□□□ -1.73
NUP42YDR192C ZRG17P53735 605 aa4.25□□□□□ -1.73
NUP42YDR192C PRP38Q00723 242 aaPredicted RBP4.25□□□□□ -1.73
NUP42YDR192C OSH6Q02201 448 aa4.25□□□□□ -1.73
NUP42YDR192C ECM11Q04110 302 aa4.25□□□□□ -1.73
NUP42YDR192C HSP31Q04432 237 aa4.25□□□□□ -1.73
NUP42YDR192C DYN3Q04949 312 aa4.25□□□□□ -1.73
NUP42YDR192C SPC2Q04969 178 aa4.25□□□□□ -1.73
NUP42YDR192C YLR345WQ06137 509 aa4.25□□□□□ -1.73
NUP42YDR192C YLL032CQ07834 825 aaKnown RBP RIP-Chip data4.25□□□□□ -1.73not detected
NUP42YDR192C NSE1Q07913 336 aa4.25□□□□□ -1.73
NUP42YDR192C YOR387CQ08910 206 aa4.25□□□□□ -1.73
NUP42YDR192C VAM3Q12241 283 aa4.25□□□□□ -1.73
NUP42YDR192C RRP42Q12277 265 aaPredicted RBP4.25□□□□□ -1.73
NUP42YDR192C ISN1Q99312 450 aa4.25□□□□□ -1.73
NUP42YDR192C COS2P0CX12 379 aa4.24□□□□□ -1.73
NUP42YDR192C COS3P0CX13 379 aa4.24□□□□□ -1.73
NUP42YDR192C HOM3P10869 527 aa4.24□□□□□ -1.73
NUP42YDR192C SPT15P13393 240 aaKnown RBP4.24□□□□□ -1.73
NUP42YDR192C SPS22P25380 463 aa4.24□□□□□ -1.73
NUP42YDR192C BUB3P26449 341 aa4.24□□□□□ -1.73
NUP42YDR192C PRP21P32524 280 aaPredicted RBP4.24□□□□□ -1.73
NUP42YDR192C PTR2P32901 601 aa4.24□□□□□ -1.73
NUP42YDR192C CAF4P36130 643 aa4.24□□□□□ -1.73
NUP42YDR192C THI2P38141 450 aa4.24□□□□□ -1.73
NUP42YDR192C GIM4P40005 111 aaKnown RBP4.24□□□□□ -1.73
NUP42YDR192C PAN6P40459 309 aa4.24□□□□□ -1.73
NUP42YDR192C SNM1P40993 198 aa4.24□□□□□ -1.73
NUP42YDR192C ZIM17P42844 174 aa4.24□□□□□ -1.73
NUP42YDR192C COS4P43542 379 aa4.24□□□□□ -1.73
NUP42YDR192C FMP33P46998 180 aa4.24□□□□□ -1.73
NUP42YDR192C AIF1P52923 378 aa4.24□□□□□ -1.73
NUP42YDR192C PRO2P54885 456 aaKnown RBP4.24□□□□□ -1.73
NUP42YDR192C YDR476CQ03362 224 aa4.24□□□□□ -1.73
NUP42YDR192C TAF12Q03761 539 aa4.24□□□□□ -1.73
NUP42YDR192C YMR087WQ04299 284 aa4.24□□□□□ -1.73
NUP42YDR192C YMR226CQ05016 267 aaKnown RBP4.24□□□□□ -1.73
NUP42YDR192C YLL007CQ07799 665 aa4.24□□□□□ -1.73
NUP42YDR192C ESA1Q08649 445 aa4.24□□□□□ -1.73
NUP42YDR192C APC9Q12107 265 aa4.24□□□□□ -1.73
NUP42YDR192C GET4Q12125 312 aa4.24□□□□□ -1.73
NUP42YDR192C SRN2Q99176 213 aa4.24□□□□□ -1.73
NUP42YDR192C TEL1P38110 2787 aa4.23□□□□□ -1.73
NUP42YDR192C CCH1P50077 2039 aa4.23□□□□□ -1.73
NUP42YDR192C THP2O13539 261 aaKnown RBP4.23□□□□□ -1.73
NUP42YDR192C ATP6P00854 259 aa4.23□□□□□ -1.73
NUP42YDR192C RPL24AP04449 155 aaKnown RBP4.23□□□□□ -1.73
NUP42YDR192C STE3P06783 470 aa4.23□□□□□ -1.73
NUP42YDR192C SPT3P06844 337 aa4.23□□□□□ -1.73
NUP42YDR192C MSS116P15424 664 aaKnown RBP4.23□□□□□ -1.73
NUP42YDR192C MRPS28P21771 286 aa4.23□□□□□ -1.73
NUP42YDR192C CBF5P33322 483 aaKnown RBP RIP-Chip data4.23□□□□□ -1.73not detected
NUP42YDR192C IST2P38250 946 aa4.23□□□□□ -1.73
NUP42YDR192C MED8P38304 223 aa4.23□□□□□ -1.73
NUP42YDR192C YDR089WP38966 869 aa4.23□□□□□ -1.73
NUP42YDR192C NPT1P39683 429 aaKnown RBP4.23□□□□□ -1.73
NUP42YDR192C AYR1P40471 297 aa4.23□□□□□ -1.73
NUP42YDR192C YJR149WP47177 404 aa4.23□□□□□ -1.73
NUP42YDR192C GET1P53192 235 aa4.23□□□□□ -1.73
NUP42YDR192C YNL140CP53910 189 aa4.23□□□□□ -1.73
NUP42YDR192C PIR1Q03178 341 aa4.23□□□□□ -1.73
NUP42YDR192C GOT1Q03554 138 aa4.23□□□□□ -1.73
NUP42YDR192C RCF1Q03713 159 aa4.23□□□□□ -1.73
NUP42YDR192C YMR130WQ04223 302 aa4.23□□□□□ -1.73
NUP42YDR192C ATG17Q06410 417 aa4.23□□□□□ -1.73
NUP42YDR192C PER33Q12144 273 aa4.23□□□□□ -1.73
NUP42YDR192C RPN5Q12250 445 aaKnown RBP4.23□□□□□ -1.73
NUP42YDR192C YPL247CQ12523 523 aa4.23□□□□□ -1.73
NUP42YDR192C SEN1Q00416 2231 aaKnown RBP4.23□□□□□ -1.73
NUP42YDR192C BCY1P07278 416 aaKnown RBP4.22□□□□□ -1.73
NUP42YDR192C VPH2P32341 215 aa4.22□□□□□ -1.73
NUP42YDR192C HIR2P32480 875 aa4.22□□□□□ -1.73
NUP42YDR192C NDC1P32500 655 aa4.22□□□□□ -1.73
NUP42YDR192C SWH1P35845 1188 aa4.22□□□□□ -1.73
NUP42YDR192C YBR241CP38142 488 aa4.22□□□□□ -1.73
NUP42YDR192C SLM4P38247 162 aa4.22□□□□□ -1.73
NUP42YDR192C IML3P38265 245 aa4.22□□□□□ -1.73
NUP42YDR192C GVP36P40531 326 aaKnown RBP4.22□□□□□ -1.73
NUP42YDR192C ERG10P41338 398 aaKnown RBP4.22□□□□□ -1.73
NUP42YDR192C YJR011CP47086 261 aaPredicted RBP4.22□□□□□ -1.73
NUP42YDR192C BIR1P47134 954 aa4.22□□□□□ -1.73
NUP42YDR192C ECM27P47144 725 aa4.22□□□□□ -1.73
NUP42YDR192C KEL2P50090 882 aa4.22□□□□□ -1.73
NUP42YDR192C COG7P53195 279 aa4.22□□□□□ -1.73
NUP42YDR192C YGR016WP53209 190 aa4.22□□□□□ -1.73
Retrieved 100 of 5,963 RNA–protein pairs in 16.2 ms