RNA–Protein interactions for RNA: YDL006W

PTC1, Transcript of Type 2C protein phosphatase (PP2C), yeast

Gene PTC1, Length 846 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PTC1	YDL006W	FRE4	P53746	719 aa		4.13	□□□□□ -1.75
PTC1	YDL006W	OCA2	P53949	197 aa		4.13	□□□□□ -1.75
PTC1	YDL006W	GPI15	P53961	229 aa		4.13	□□□□□ -1.75
PTC1	YDL006W	GIP3	Q03016	1276 aa		4.13	□□□□□ -1.75
PTC1	YDL006W	NHP10	Q03435	203 aa		4.13	□□□□□ -1.75
PTC1	YDL006W	HEL2	Q05580	639 aa	Known RBP	4.13	□□□□□ -1.75
PTC1	YDL006W	UAF30	Q08747	228 aa		4.13	□□□□□ -1.75
PTC1	YDL006W	YPR022C	Q12139	1133 aa		4.13	□□□□□ -1.75
PTC1	YDL006W	PER33	Q12144	273 aa		4.13	□□□□□ -1.75
PTC1	YDL006W	RMD5	Q12508	421 aa		4.13	□□□□□ -1.75
PTC1	YDL006W	RRP12	Q12754	1228 aa	Known RBP	4.13	□□□□□ -1.75
PTC1	YDL006W	YMR030W-A	Q3E760	96 aa		4.13	□□□□□ -1.75
PTC1	YDL006W	YOR338W	Q99326	363 aa		4.13	□□□□□ -1.75
PTC1	YDL006W	RAD3	P06839	778 aa		4.12	□□□□□ -1.75
PTC1	YDL006W	CPR1	P14832	162 aa	Known RBP	4.12	□□□□□ -1.75
PTC1	YDL006W	FPR1	P20081	114 aa	Known RBP	4.12	□□□□□ -1.75
PTC1	YDL006W	UBA1	P22515	1024 aa	Known RBP	4.12	□□□□□ -1.75
PTC1	YDL006W	YCR099C	P25657	155 aa		4.12	□□□□□ -1.75
PTC1	YDL006W	PRP18	P33411	251 aa	Predicted RBP	4.12	□□□□□ -1.75
PTC1	YDL006W	CAB3	P36076	571 aa		4.12	□□□□□ -1.75
PTC1	YDL006W	MIX23	P38162	196 aa		4.12	□□□□□ -1.75
PTC1	YDL006W	LDB7	P38210	180 aa		4.12	□□□□□ -1.75
PTC1	YDL006W	PCF11	P39081	626 aa	Predicted RBP	4.12	□□□□□ -1.75
PTC1	YDL006W	SER3	P40054	469 aa		4.12	□□□□□ -1.75
PTC1	YDL006W	GLG2	P47011	380 aa		4.12	□□□□□ -1.75
PTC1	YDL006W	COG7	P53195	279 aa		4.12	□□□□□ -1.75
PTC1	YDL006W	VAC7	P53950	1165 aa		4.12	□□□□□ -1.75
PTC1	YDL006W	OSH6	Q02201	448 aa		4.12	□□□□□ -1.75
PTC1	YDL006W	YMR181C	Q03231	154 aa		4.12	□□□□□ -1.75
PTC1	YDL006W	RSN1	Q03516	953 aa		4.12	□□□□□ -1.75
PTC1	YDL006W	CSN9	Q03981	162 aa		4.12	□□□□□ -1.75
PTC1	YDL006W	YTH1	Q06102	208 aa	Predicted RBP	4.12	□□□□□ -1.75
PTC1	YDL006W	SEC10	Q06245	871 aa		4.12	□□□□□ -1.75
PTC1	YDL006W	DCI1	Q08558	271 aa		4.12	□□□□□ -1.75
PTC1	YDL006W	ORT1	Q12375	292 aa		4.12	□□□□□ -1.75
PTC1	YDL006W	STE2	D6VTK4	431 aa		4.11	□□□□□ -1.75
PTC1	YDL006W	NMT1	P14743	455 aa		4.11	□□□□□ -1.75
PTC1	YDL006W	YCR090C	P25654	182 aa	Known RBP	4.11	□□□□□ -1.75
PTC1	YDL006W	CPR3	P25719	182 aa		4.11	□□□□□ -1.75
PTC1	YDL006W	SPS19	P32573	292 aa	Known RBP	4.11	□□□□□ -1.75
PTC1	YDL006W	TOA1	P32773	286 aa		4.11	□□□□□ -1.75
PTC1	YDL006W	NAT2	P37293	288 aa		4.11	□□□□□ -1.75
PTC1	YDL006W	ASC1	P38011	319 aa	Known RBP	4.11	□□□□□ -1.75
PTC1	YDL006W	HEK2	P38199	381 aa	Known RBP RIP-Chip data	4.11	□□□□□ -1.75	RIP-Chip
PTC1	YDL006W	ZTA1	P38230	334 aa	Known RBP	4.11	□□□□□ -1.75
PTC1	YDL006W	HSM3	P38348	480 aa		4.11	□□□□□ -1.75
PTC1	YDL006W	SER33	P40510	469 aa		4.11	□□□□□ -1.75
PTC1	YDL006W	YFR018C	P43599	363 aa		4.11	□□□□□ -1.75
PTC1	YDL006W	YJL055W	P47044	245 aa		4.11	□□□□□ -1.75
PTC1	YDL006W	BOL2	P53082	120 aa		4.11	□□□□□ -1.75
PTC1	YDL006W	SWC4	P53201	476 aa		4.11	□□□□□ -1.75
PTC1	YDL006W	SPP2	Q02521	185 aa		4.11	□□□□□ -1.75
PTC1	YDL006W	OAZ1	Q02803	292 aa		4.11	□□□□□ -1.75
PTC1	YDL006W	CCE1	Q03702	353 aa		4.11	□□□□□ -1.75
PTC1	YDL006W	RCF1	Q03713	159 aa		4.11	□□□□□ -1.75
PTC1	YDL006W	MDY2	Q12285	212 aa		4.11	□□□□□ -1.75
PTC1	YDL006W	ATG34	Q12292	412 aa		4.11	□□□□□ -1.75
PTC1	YDL006W	GTT2	Q12390	233 aa		4.11	□□□□□ -1.75
PTC1	YDL006W	YCL021W-A	Q96VH3	125 aa		4.11	□□□□□ -1.75
PTC1	YDL006W	TOR1	P35169	2470 aa		4.1	□□□□□ -1.75
PTC1	YDL006W	ILV5	P06168	395 aa	Known RBP	4.1	□□□□□ -1.75
PTC1	YDL006W	CPA1	P07258	411 aa	Known RBP	4.1	□□□□□ -1.75
PTC1	YDL006W	POL30	P15873	258 aa	Known RBP	4.1	□□□□□ -1.75
PTC1	YDL006W	EPT1	P22140	391 aa		4.1	□□□□□ -1.75
PTC1	YDL006W	SKT5	P34226	696 aa		4.1	□□□□□ -1.75
PTC1	YDL006W	EFM1	P38732	585 aa		4.1	□□□□□ -1.75
PTC1	YDL006W	YHR218W	P38899	603 aa		4.1	□□□□□ -1.75
PTC1	YDL006W	YDR089W	P38966	869 aa		4.1	□□□□□ -1.75
PTC1	YDL006W	FAA2	P39518	744 aa		4.1	□□□□□ -1.75
PTC1	YDL006W	JEM1	P40358	645 aa		4.1	□□□□□ -1.75
PTC1	YDL006W	YPS6	P40583	537 aa		4.1	□□□□□ -1.75
PTC1	YDL006W	YRB1	P41920	201 aa	Known RBP	4.1	□□□□□ -1.75
PTC1	YDL006W	GCD14	P46959	383 aa	Predicted RBP	4.1	□□□□□ -1.75
PTC1	YDL006W	NUP84	P52891	726 aa		4.1	□□□□□ -1.75
PTC1	YDL006W	MRM2	P53123	320 aa		4.1	□□□□□ -1.75
PTC1	YDL006W	EFM5	P53200	248 aa	Known RBP	4.1	□□□□□ -1.75
PTC1	YDL006W	CLD1	P53264	445 aa		4.1	□□□□□ -1.75
PTC1	YDL006W	WSC2	P53832	503 aa		4.1	□□□□□ -1.75
PTC1	YDL006W	TVP15	Q03860	143 aa		4.1	□□□□□ -1.75
PTC1	YDL006W	RRN11	Q04712	507 aa		4.1	□□□□□ -1.75
PTC1	YDL006W	APC9	Q12107	265 aa		4.1	□□□□□ -1.75
PTC1	YDL006W	YOR012W	Q12351	137 aa		4.1	□□□□□ -1.75
PTC1	YDL006W	COX3	P00420	269 aa		4.09	□□□□□ -1.75
PTC1	YDL006W	RSR1	P13856	272 aa		4.09	□□□□□ -1.75
PTC1	YDL006W	PTM1	P32857	523 aa		4.09	□□□□□ -1.75
PTC1	YDL006W	TIP20	P33891	701 aa		4.09	□□□□□ -1.75
PTC1	YDL006W	KKQ8	P36004	724 aa		4.09	□□□□□ -1.75
PTC1	YDL006W	RRP4	P38792	359 aa	Known RBP	4.09	□□□□□ -1.75
PTC1	YDL006W	CYC2	P38909	366 aa		4.09	□□□□□ -1.75
PTC1	YDL006W	KRE9	P39005	276 aa		4.09	□□□□□ -1.75
PTC1	YDL006W	YHB1	P39676	399 aa	Known RBP	4.09	□□□□□ -1.75
PTC1	YDL006W	GAT2	P40209	560 aa		4.09	□□□□□ -1.75
PTC1	YDL006W	MEP1	P40260	492 aa		4.09	□□□□□ -1.75
PTC1	YDL006W	AIF1	P52923	378 aa		4.09	□□□□□ -1.75
PTC1	YDL006W	AQR1	P53943	586 aa		4.09	□□□□□ -1.75
PTC1	YDL006W	LSM3	P57743	89 aa	Known RBP	4.09	□□□□□ -1.75
PTC1	YDL006W	RMI1	Q02685	241 aa		4.09	□□□□□ -1.75
PTC1	YDL006W	RNY1	Q02933	434 aa	Known RBP	4.09	□□□□□ -1.75
PTC1	YDL006W	BET5	Q03630	159 aa		4.09	□□□□□ -1.75
PTC1	YDL006W	YLR456W	Q06199	204 aa		4.09	□□□□□ -1.75

Retrieved 100 of 5,963 RNA–protein pairs in 13.1 ms