RNA–Protein interactions for RNA: NME1

NME1, Transcript of RNA component of RNase MRP, yeastyeast

Gene NME1, Length 340 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NME1NME1 RNH201P53942 307 aa6.74□□□□□ -1.33
NME1NME1 COX4P04037 155 aa6.73□□□□□ -1.33
NME1NME1 URA10P30402 227 aa6.73□□□□□ -1.33
NME1NME1 VHT1P53241 593 aa6.73□□□□□ -1.33
NME1NME1 RAD23P32628 398 aaKnown RBP6.72□□□□□ -1.33
NME1NME1 RPC25P35718 212 aa6.72□□□□□ -1.33
NME1NME1 YKL071WP36086 256 aa6.72□□□□□ -1.33
NME1NME1 RTT105P40063 208 aa6.72□□□□□ -1.33
NME1NME1 YJR054WP47114 497 aa6.72□□□□□ -1.33
NME1NME1 BIO3P50277 480 aa6.72□□□□□ -1.33
NME1NME1 SEH1P53011 349 aaKnown RBP6.72□□□□□ -1.33
NME1NME1 YGR015CP53208 328 aa6.72□□□□□ -1.33
NME1NME1 MKC7P53379 596 aa6.72□□□□□ -1.33
NME1NME1 HAL1Q01766 294 aa6.72□□□□□ -1.33
NME1NME1 IRC4Q03036 179 aa6.72□□□□□ -1.33
NME1NME1 VTI1Q04338 217 aa6.72□□□□□ -1.33
NME1NME1 YDR115WQ04598 105 aa6.72□□□□□ -1.33
NME1NME1 APC4Q04601 652 aa6.72□□□□□ -1.33
NME1NME1 TAF10Q12030 206 aa6.72□□□□□ -1.33
NME1NME1 MRPL23Q12487 163 aaPredicted RBP6.72□□□□□ -1.33
NME1NME1 RPL21BQ12672 160 aaKnown RBP6.72□□□□□ -1.33
NME1NME1 RPL5P26321 297 aaKnown RBP6.71□□□□□ -1.34
NME1NME1 DTR1P38125 572 aa6.71□□□□□ -1.34
NME1NME1 YMR262WP38430 313 aa6.71□□□□□ -1.34
NME1NME1 OKP1P53298 406 aa6.71□□□□□ -1.34
NME1NME1 GIS2P53849 153 aaKnown RBP RIP-Chip data6.71□□□□□ -1.34not detected
NME1NME1 YPL080CQ02826 108 aa6.71□□□□□ -1.34
NME1NME1 ECM18Q04623 453 aa6.71□□□□□ -1.34
NME1NME1 FOL3Q12676 427 aaPredicted RBP6.71□□□□□ -1.34
NME1NME1 REP1P03871 373 aa6.7□□□□□ -1.34
NME1NME1 PCL1P24867 279 aa6.7□□□□□ -1.34
NME1NME1 SHE1P38200 338 aa6.7□□□□□ -1.34
NME1NME1 PEX22P39718 180 aa6.7□□□□□ -1.34
NME1NME1 TIS11P47977 285 aa6.7□□□□□ -1.34
NME1NME1 YMR111CQ04461 462 aaPredicted RBP6.7□□□□□ -1.34
NME1NME1 LDB17Q12342 491 aa6.7□□□□□ -1.34
NME1NME1 RAD7P06779 565 aa6.69□□□□□ -1.34
NME1NME1 ZRT1P32804 376 aa6.69□□□□□ -1.34
NME1NME1 KTI12P34253 313 aaKnown RBP6.69□□□□□ -1.34
NME1NME1 DSE1P40077 573 aa6.69□□□□□ -1.34
NME1NME1 GCD14P46959 383 aaPredicted RBP6.69□□□□□ -1.34
NME1NME1 COX16P47081 118 aa6.69□□□□□ -1.34
NME1NME1 ERV41Q04651 352 aa6.69□□□□□ -1.34
NME1NME1 DAL5P15365 543 aa6.68□□□□□ -1.34
NME1NME1 SDS24P38314 527 aa6.68□□□□□ -1.34
NME1NME1 ALD5P40047 520 aaKnown RBP6.68□□□□□ -1.34
NME1NME1 RDL2Q08742 149 aaKnown RBP6.68□□□□□ -1.34
NME1NME1 SIA1Q12212 622 aa6.68□□□□□ -1.34
NME1NME1 SAL1D6W196 494 aa6.67□□□□□ -1.34
NME1NME1 ASP3-2P0CX77 362 aa6.67□□□□□ -1.34
NME1NME1 ASP3-3P0CX78 362 aa6.67□□□□□ -1.34
NME1NME1 ASP3-4P0CX79 362 aa6.67□□□□□ -1.34
NME1NME1 ASP3-1P0CZ17 362 aa6.67□□□□□ -1.34
NME1NME1 HSP26P15992 214 aaKnown RBP RIP-Chip data6.67□□□□□ -1.34not detected
NME1NME1 PPQ1P32945 549 aa6.67□□□□□ -1.34
NME1NME1 YHR035WP38769 630 aa6.67□□□□□ -1.34
NME1NME1 STB1P42845 420 aa6.67□□□□□ -1.34
NME1NME1 KTR6P54070 446 aa6.67□□□□□ -1.34
NME1NME1 MRPS16Q02608 121 aa6.67□□□□□ -1.34
NME1NME1 PBP4Q07362 185 aaKnown RBP6.67□□□□□ -1.34
NME1NME1 YLR012CQ07927 99 aa6.67□□□□□ -1.34
NME1NME1 RPN8Q08723 338 aaKnown RBP6.67□□□□□ -1.34
NME1NME1 YOR376WQ08900 122 aa6.67□□□□□ -1.34
NME1NME1 YPQ1Q12010 308 aa6.67□□□□□ -1.34
NME1NME1 OM45P16547 393 aa6.66□□□□□ -1.34
NME1NME1 YPS5P53057 165 aa6.66□□□□□ -1.34
NME1NME1 SRO7Q12038 1033 aa6.66□□□□□ -1.34
NME1NME1 CHL4P38907 458 aa6.65□□□□□ -1.34
NME1NME1 PMT4P46971 762 aa6.65□□□□□ -1.34
NME1NME1 NRM1P53718 249 aa6.65□□□□□ -1.34
NME1NME1 SCS7Q03529 384 aa6.65□□□□□ -1.34
NME1NME1 FAR10Q06001 478 aa6.65□□□□□ -1.34
NME1NME1 MRX9Q07349 420 aaKnown RBP6.65□□□□□ -1.34
NME1NME1 DTD1Q07648 150 aaKnown RBP6.65□□□□□ -1.34
NME1NME1 PRM4Q12498 284 aa6.65□□□□□ -1.34
NME1NME1 SPS100P13130 326 aa6.64□□□□□ -1.35
NME1NME1 UTH1P36135 365 aa6.64□□□□□ -1.35
NME1NME1 SHE3P38272 425 aaKnown RBP6.64□□□□□ -1.35
NME1NME1 PEX18P38855 283 aa6.64□□□□□ -1.35
NME1NME1 YFL040WP43562 540 aa6.64□□□□□ -1.35
NME1NME1 YGR266WP53326 701 aa6.64□□□□□ -1.35
NME1NME1 YNL260CP53846 198 aa6.64□□□□□ -1.35
NME1NME1 MHP1P43638 1398 aa6.64□□□□□ -1.35
NME1NME1 PSK1P31374 1356 aa6.63□□□□□ -1.35
NME1NME1 RIB7P33312 244 aa6.63□□□□□ -1.35
NME1NME1 GTO1P48239 356 aa6.63□□□□□ -1.35
NME1NME1 YGL185CP53100 379 aa6.63□□□□□ -1.35
NME1NME1 BIO4P53630 237 aa6.63□□□□□ -1.35
NME1NME1 MRX11Q03079 207 aa6.63□□□□□ -1.35
NME1NME1 TSA2Q04120 196 aa6.63□□□□□ -1.35
NME1NME1 STE2D6VTK4 431 aa6.62□□□□□ -1.35
NME1NME1 BGL2P15703 313 aaKnown RBP6.62□□□□□ -1.35
NME1NME1 ERD1P16151 362 aa6.62□□□□□ -1.35
NME1NME1 GPI12P23797 304 aa6.62□□□□□ -1.35
NME1NME1 VPS45P38932 577 aa6.62□□□□□ -1.35
NME1NME1 YGL262WP53054 175 aa6.62□□□□□ -1.35
NME1NME1 YNL050CP53952 270 aa6.62□□□□□ -1.35
NME1NME1 RMI1Q02685 241 aa6.62□□□□□ -1.35
NME1NME1 SNX41Q04053 625 aa6.62□□□□□ -1.35
NME1NME1 BCP1Q06338 283 aa6.62□□□□□ -1.35
Retrieved 100 of 5,963 RNA–protein pairs in 18.3 ms