RNA–Protein interactions for RNA: ENST00000625810.2

ATG4B-226, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 4 BASIC

Gene ATG4B, Length 370 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-226ENST00000625810 OXER1Q8TDS5 423 aa21.52■■□□□ 1.04
ATG4B-226ENST00000625810 CASD1Q96PB1 797 aa21.52■■□□□ 1.04
ATG4B-226ENST00000625810 POP1Q99575 1024 aaKnown RBP21.52■■□□□ 1.04
ATG4B-226ENST00000625810 FDXACB1Q9BRP7 624 aaPredicted RBP21.52■■□□□ 1.04
ATG4B-226ENST00000625810 INO80BQ9C086 356 aaPredicted RBP21.52■■□□□ 1.04
ATG4B-226ENST00000625810 BRMS1Q9HCU9 246 aa21.52■■□□□ 1.04
ATG4B-226ENST00000625810 KCNMB3Q9NPA1 279 aa21.52■■□□□ 1.04
ATG4B-226ENST00000625810 PUF60Q9UHX1 559 aaKnown RBP21.52■■□□□ 1.04
ATG4B-226ENST00000625810 BARX2Q9UMQ3 279 aaPredicted RBP21.52■■□□□ 1.04
ATG4B-226ENST00000625810 MAFO75444 373 aaPredicted RBP21.51■■□□□ 1.03
ATG4B-226ENST00000625810 BAG4O95429 457 aaKnown RBP21.51■■□□□ 1.03
ATG4B-226ENST00000625810 PLA2G4FQ68DD2 849 aa21.51■■□□□ 1.03
ATG4B-226ENST00000625810 ANO5Q75V66 913 aa21.51■■□□□ 1.03
ATG4B-226ENST00000625810 LRRC43Q8N309 656 aa21.51■■□□□ 1.03
ATG4B-226ENST00000625810 NECAB1Q8N987 351 aa21.51■■□□□ 1.03
ATG4B-226ENST00000625810 CEP89Q96ST8 783 aa21.51■■□□□ 1.03
ATG4B-226ENST00000625810 VAV3Q9UKW4 847 aa21.51■■□□□ 1.03
ATG4B-226ENST00000625810 A0A0U1RQF3 1178 aa21.5■■□□□ 1.03
ATG4B-226ENST00000625810 FSCN2O14926 492 aa21.5■■□□□ 1.03
ATG4B-226ENST00000625810 PER2O15055 1255 aa21.5■■□□□ 1.03
ATG4B-226ENST00000625810 TBX3O15119 743 aa21.5■■□□□ 1.03
ATG4B-226ENST00000625810 EIF5BO60841 1220 aaKnown RBP21.5■■□□□ 1.03
ATG4B-226ENST00000625810 EOMESO95936 686 aa21.5■■□□□ 1.03
ATG4B-226ENST00000625810 P4HBP07237 508 aaKnown RBP21.5■■□□□ 1.03
ATG4B-226ENST00000625810 SFPQP23246 707 aaKnown RBP eCLIP21.5■■□□□ 1.03
ATG4B-226ENST00000625810 KRT2P35908 639 aa21.5■■□□□ 1.03
ATG4B-226ENST00000625810 ERVFC1P60507 584 aa21.5■■□□□ 1.03
ATG4B-226ENST00000625810 PDE12Q6L8Q7 609 aaKnown RBP21.5■■□□□ 1.03
ATG4B-226ENST00000625810 KCNT2Q6UVM3 1135 aa21.5■■□□□ 1.03
ATG4B-226ENST00000625810 LRRC55Q6ZSA7 311 aa21.5■■□□□ 1.03
ATG4B-226ENST00000625810 ZNF410Q86VK4 478 aa21.5■■□□□ 1.03
ATG4B-226ENST00000625810 VN1R2Q8NFZ6 395 aa21.5■■□□□ 1.03
ATG4B-226ENST00000625810 ZNF558Q96NG5 402 aa21.5■■□□□ 1.03
ATG4B-226ENST00000625810 CYP26B1Q9NR63 512 aa21.5■■□□□ 1.03
ATG4B-226ENST00000625810 CHST12Q9NRB3 414 aa21.5■■□□□ 1.03
ATG4B-226ENST00000625810 MUC6Q6W4X9 2439 aa21.5■■□□□ 1.03
ATG4B-226ENST00000625810 NPEPPSP55786 919 aa21.49■■□□□ 1.03
ATG4B-226ENST00000625810 RBM10P98175 930 aaKnown RBP21.49■■□□□ 1.03
ATG4B-226ENST00000625810 PLCB3Q01970 1234 aa21.49■■□□□ 1.03
ATG4B-226ENST00000625810 KRT17Q04695 432 aa21.49■■□□□ 1.03
ATG4B-226ENST00000625810 ME3Q16798 604 aa21.49■■□□□ 1.03
ATG4B-226ENST00000625810 NCAPH2Q6IBW4 605 aa21.49■■□□□ 1.03
ATG4B-226ENST00000625810 EXOC8Q8IYI6 725 aa21.49■■□□□ 1.03
ATG4B-226ENST00000625810 HELQQ8TDG4 1101 aa21.49■■□□□ 1.03
ATG4B-226ENST00000625810 SLC7A3Q8WY07 619 aa21.49■■□□□ 1.03
ATG4B-226ENST00000625810 MRPS27Q92552 414 aaKnown RBP21.49■■□□□ 1.03
ATG4B-226ENST00000625810 CEP170P1Q96L14 293 aa21.49■■□□□ 1.03
ATG4B-226ENST00000625810 NLRP4Q96MN2 994 aa21.49■■□□□ 1.03
ATG4B-226ENST00000625810 MUTYHQ9UIF7 546 aa21.49■■□□□ 1.03
ATG4B-226ENST00000625810 PPM1AP35813 382 aa21.48■■□□□ 1.03
ATG4B-226ENST00000625810 POLGP54098 1239 aaPredicted RBP21.48■■□□□ 1.03
ATG4B-226ENST00000625810 NR5A1Q13285 461 aa21.48■■□□□ 1.03
ATG4B-226ENST00000625810 EPHA7Q15375 998 aa21.48■■□□□ 1.03
ATG4B-226ENST00000625810 DUSP6Q16828 381 aa21.48■■□□□ 1.03
ATG4B-226ENST00000625810 EARS2Q5JPH6 523 aaKnown RBP21.48■■□□□ 1.03
ATG4B-226ENST00000625810 CLLU1OSQ5K130 101 aa21.48■■□□□ 1.03
ATG4B-226ENST00000625810 PLPP4Q5VZY2 271 aa21.48■■□□□ 1.03
ATG4B-226ENST00000625810 TWF2Q6IBS0 349 aaKnown RBP21.48■■□□□ 1.03
ATG4B-226ENST00000625810 CATSPER4Q7RTX7 472 aa21.48■■□□□ 1.03
ATG4B-226ENST00000625810 POTEDQ86YR6 584 aa21.48■■□□□ 1.03
ATG4B-226ENST00000625810 RNF135Q8IUD6 432 aa21.48■■□□□ 1.03
ATG4B-226ENST00000625810 KSR1Q8IVT5 923 aa21.48■■□□□ 1.03
ATG4B-226ENST00000625810 SLFN12Q8IYM2 578 aa21.48■■□□□ 1.03
ATG4B-226ENST00000625810 HAS1Q92839 578 aa21.48■■□□□ 1.03
ATG4B-226ENST00000625810 GTF3C6Q969F1 213 aa21.48■■□□□ 1.03
ATG4B-226ENST00000625810 ENTPD7Q9NQZ7 604 aa21.48■■□□□ 1.03
ATG4B-226ENST00000625810 LZTS1Q9Y250 596 aa21.48■■□□□ 1.03
ATG4B-226ENST00000625810 USP15Q9Y4E8 981 aaPredicted RBP21.48■■□□□ 1.03
ATG4B-226ENST00000625810 FSD2A1L4K1 749 aa21.47■■□□□ 1.03
ATG4B-226ENST00000625810 SKIP12755 728 aa21.47■■□□□ 1.03
ATG4B-226ENST00000625810 FDPSP14324 419 aaKnown RBP21.47■■□□□ 1.03
ATG4B-226ENST00000625810 HOXD11P31277 338 aaPredicted RBP21.47■■□□□ 1.03
ATG4B-226ENST00000625810 NEK4P51957 841 aa21.47■■□□□ 1.03
ATG4B-226ENST00000625810 HERC4Q5GLZ8 1057 aaPredicted RBP21.47■■□□□ 1.03
ATG4B-226ENST00000625810 OTUD6AQ7L8S5 288 aa21.47■■□□□ 1.03
ATG4B-226ENST00000625810 ZNF598Q86UK7 904 aaKnown RBP21.47■■□□□ 1.03
ATG4B-226ENST00000625810 CDCA3Q99618 268 aaPredicted RBP21.47■■□□□ 1.03
ATG4B-226ENST00000625810 TCF25Q9BQ70 676 aa21.47■■□□□ 1.03
ATG4B-226ENST00000625810 MRPL9Q9BYD2 267 aaKnown RBP21.47■■□□□ 1.03
ATG4B-226ENST00000625810 SPG21Q9NZD8 308 aa21.47■■□□□ 1.03
ATG4B-226ENST00000625810 PIN4Q9Y237 131 aaKnown RBP21.47■■□□□ 1.03
ATG4B-226ENST00000625810 TRIOO75962 3097 aa21.46■■□□□ 1.03
ATG4B-226ENST00000625810 FAM205CA6NFA0 338 aa21.46■■□□□ 1.03
ATG4B-226ENST00000625810 LARGE1O95461 756 aa21.46■■□□□ 1.03
ATG4B-226ENST00000625810 ATF7P17544 494 aaPredicted RBP21.46■■□□□ 1.03
ATG4B-226ENST00000625810 PBX3P40426 434 aa21.46■■□□□ 1.03
ATG4B-226ENST00000625810 PHKA2P46019 1235 aa21.46■■□□□ 1.03
ATG4B-226ENST00000625810 TRIM29Q14134 588 aa21.46■■□□□ 1.03
ATG4B-226ENST00000625810 C4orf19Q8IY42 314 aa21.46■■□□□ 1.03
ATG4B-226ENST00000625810 DYDC2Q96IM9 177 aa21.46■■□□□ 1.03
ATG4B-226ENST00000625810 LXNQ9BS40 222 aa21.46■■□□□ 1.03
ATG4B-226ENST00000625810 RGL1Q9NZL6 768 aa21.46■■□□□ 1.03
ATG4B-226ENST00000625810 WRAP73Q9P2S5 460 aaPredicted RBP21.46■■□□□ 1.03
ATG4B-226ENST00000625810 PPME1Q9Y570 386 aa21.46■■□□□ 1.03
ATG4B-226ENST00000625810 COL4A3BPQ9Y5P4 624 aa21.46■■□□□ 1.03
ATG4B-226ENST00000625810 YWHABP31946 246 aaKnown RBP21.45■■□□□ 1.02
ATG4B-226ENST00000625810 RFC5P40937 340 aa21.45■■□□□ 1.02
ATG4B-226ENST00000625810 FOSBP53539 338 aa21.45■■□□□ 1.02
ATG4B-226ENST00000625810 KCNC3Q14003 757 aa21.45■■□□□ 1.02
ATG4B-226ENST00000625810 LONRF3Q496Y0 759 aa21.45■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms