RNA–Protein interactions for RNA: ENST00000546271.1

UBC-214, Transcript of ubiquitin C, humanhuman

TSL 4

Gene UBC, Length 559 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBC-214ENST00000546271 TMEM161AQ9NX61 479 aa13.36□□□□□ -0.27
UBC-214ENST00000546271 SMC3Q9UQE7 1217 aa13.36□□□□□ -0.27
UBC-214ENST00000546271 RWDD3Q9Y3V2 267 aa13.36□□□□□ -0.27
UBC-214ENST00000546271 COL4A3BPQ9Y5P4 624 aa13.36□□□□□ -0.27
UBC-214ENST00000546271 MRPL42Q9Y6G3 142 aaKnown RBP13.36□□□□□ -0.27
UBC-214ENST00000546271 A0A0C4DFX4 3053 aa13.36□□□□□ -0.27
UBC-214ENST00000546271 RB1P06400 928 aa13.35□□□□□ -0.27
UBC-214ENST00000546271 BMP1P13497 986 aa13.35□□□□□ -0.27
UBC-214ENST00000546271 KCNA5P22460 613 aa13.35□□□□□ -0.27
UBC-214ENST00000546271 RARRES1P49788 294 aa13.35□□□□□ -0.27
UBC-214ENST00000546271 FAM102BQ5T8I3 360 aa13.35□□□□□ -0.27
UBC-214ENST00000546271 CATSPER3Q86XQ3 398 aa13.35□□□□□ -0.27
UBC-214ENST00000546271 PIGOQ8TEQ8 1089 aa13.35□□□□□ -0.27
UBC-214ENST00000546271 TCP11Q8WWU5 503 aa13.35□□□□□ -0.27
UBC-214ENST00000546271 PRPF31Q8WWY3 499 aaKnown RBP13.35□□□□□ -0.27
UBC-214ENST00000546271 MTRQ99707 1265 aa13.35□□□□□ -0.27
UBC-214ENST00000546271 INO80BQ9C086 356 aaPredicted RBP13.35□□□□□ -0.27
UBC-214ENST00000546271 ATP6V0A4Q9HBG4 840 aa13.35□□□□□ -0.27
UBC-214ENST00000546271 IFT122Q9HBG6 1241 aa13.35□□□□□ -0.27
UBC-214ENST00000546271 TUFT1Q9NNX1 390 aa13.35□□□□□ -0.27
UBC-214ENST00000546271 XPNPEP1Q9NQW7 623 aa13.35□□□□□ -0.27
UBC-214ENST00000546271 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.35□□□□□ -0.27
UBC-214ENST00000546271 PCDHB6Q9Y5E3 794 aa13.35□□□□□ -0.27
UBC-214ENST00000546271 A0A087WWV3 80 aa13.34□□□□□ -0.27
UBC-214ENST00000546271 H3BQV1 296 aa13.34□□□□□ -0.27
UBC-214ENST00000546271 MED24O75448 989 aa13.34□□□□□ -0.27
UBC-214ENST00000546271 FGFR1P11362 822 aa13.34□□□□□ -0.27
UBC-214ENST00000546271 XRCC6P12956 609 aaKnown RBP eCLIP13.34□□□□□ -0.271e-13■□□□□ 10.4
UBC-214ENST00000546271 SFPQP23246 707 aaKnown RBP eCLIP13.34□□□□□ -0.27
UBC-214ENST00000546271 FXR2P51116 673 aaKnown RBP eCLIP13.34□□□□□ -0.271e-20■□□□□ 10.2
UBC-214ENST00000546271 LAMTOR4Q0VGL1 99 aa13.34□□□□□ -0.27
UBC-214ENST00000546271 TCEAL5Q5H9L2 206 aa13.34□□□□□ -0.27
UBC-214ENST00000546271 SPOUT1Q5T280 376 aaKnown RBP13.34□□□□□ -0.27
UBC-214ENST00000546271 MCTP1Q6DN14 999 aa13.34□□□□□ -0.27
UBC-214ENST00000546271 FERMT3Q86UX7 667 aa13.34□□□□□ -0.27
UBC-214ENST00000546271 ECHDC2Q86YB7 292 aa13.34□□□□□ -0.27
UBC-214ENST00000546271 ERMNQ8TAM6 284 aa13.34□□□□□ -0.27
UBC-214ENST00000546271 POLR3CQ9BUI4 534 aaPredicted RBP13.34□□□□□ -0.27
UBC-214ENST00000546271 NSUN3Q9H649 340 aaKnown RBP13.34□□□□□ -0.27
UBC-214ENST00000546271 CHST12Q9NRB3 414 aa13.34□□□□□ -0.27
UBC-214ENST00000546271 VCANP13611 3396 aa13.34□□□□□ -0.27
UBC-214ENST00000546271 A0A0U1RQF3 1178 aa13.33□□□□□ -0.28
UBC-214ENST00000546271 TBKBP1A7MCY6 615 aa13.33□□□□□ -0.28
UBC-214ENST00000546271 GRM6O15303 877 aa13.33□□□□□ -0.28
UBC-214ENST00000546271 ASAP2O43150 1006 aa13.33□□□□□ -0.28
UBC-214ENST00000546271 DGAT1O75907 488 aa13.33□□□□□ -0.28
UBC-214ENST00000546271 SRGAP2CP0DJJ0 459 aa13.33□□□□□ -0.28
UBC-214ENST00000546271 RPA1P27694 616 aa13.33□□□□□ -0.28
UBC-214ENST00000546271 PTGDRQ13258 359 aa13.33□□□□□ -0.28
UBC-214ENST00000546271 CUL4AQ13619 759 aa13.33□□□□□ -0.28
UBC-214ENST00000546271 SRGAP1Q7Z6B7 1085 aa13.33□□□□□ -0.28
UBC-214ENST00000546271 CCDC43Q96MW1 224 aaKnown RBP13.33□□□□□ -0.28
UBC-214ENST00000546271 PLVAPQ9BX97 442 aa13.33□□□□□ -0.28
UBC-214ENST00000546271 LMAN2LQ9H0V9 348 aa13.33□□□□□ -0.28
UBC-214ENST00000546271 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.33□□□□□ -0.28
UBC-214ENST00000546271 RNF19AQ9NV58 838 aa13.33□□□□□ -0.28
UBC-214ENST00000546271 DACT1Q9NYF0 836 aa13.33□□□□□ -0.28
UBC-214ENST00000546271 GTF3C3Q9Y5Q9 886 aa13.33□□□□□ -0.28
UBC-214ENST00000546271 SPTBN5Q9NRC6 3674 aaKnown RBP13.33□□□□□ -0.28
UBC-214ENST00000546271 XIRP2A4UGR9 3374 aa13.33□□□□□ -0.28
UBC-214ENST00000546271 ARL2P36404 184 aa13.32□□□□□ -0.28
UBC-214ENST00000546271 PDIA5Q14554 519 aa13.32□□□□□ -0.28
UBC-214ENST00000546271 MXD4Q14582 209 aaPredicted RBP13.32□□□□□ -0.28
UBC-214ENST00000546271 RILPL1Q5EBL4 403 aa13.32□□□□□ -0.28
UBC-214ENST00000546271 LARP1BQ659C4 914 aaKnown RBP13.32□□□□□ -0.28
UBC-214ENST00000546271 POTEGQ6S5H5 508 aa13.32□□□□□ -0.28
UBC-214ENST00000546271 CATSPER4Q7RTX7 472 aa13.32□□□□□ -0.28
UBC-214ENST00000546271 ZNF598Q86UK7 904 aaKnown RBP13.32□□□□□ -0.28
UBC-214ENST00000546271 RNF149Q8NC42 400 aa13.32□□□□□ -0.28
UBC-214ENST00000546271 P2RX5Q93086 422 aa13.32□□□□□ -0.28
UBC-214ENST00000546271 NACC1Q96RE7 527 aa13.32□□□□□ -0.28
UBC-214ENST00000546271 TRAIPQ9BWF2 469 aa13.32□□□□□ -0.28
UBC-214ENST00000546271 TMEM117Q9H0C3 514 aa13.32□□□□□ -0.28
UBC-214ENST00000546271 MINDY3Q9H8M7 445 aa13.32□□□□□ -0.28
UBC-214ENST00000546271 ALG13Q9NP73 1137 aaKnown RBP13.32□□□□□ -0.28
UBC-214ENST00000546271 AGPAT5Q9NUQ2 364 aa13.32□□□□□ -0.28
UBC-214ENST00000546271 CLDND1Q9NY35 253 aa13.32□□□□□ -0.28
UBC-214ENST00000546271 DBR1Q9UK59 544 aaKnown RBP13.32□□□□□ -0.28
UBC-214ENST00000546271 PIN4Q9Y237 131 aaKnown RBP13.32□□□□□ -0.28
UBC-214ENST00000546271 H3BQ06 376 aaPredicted RBP13.31□□□□□ -0.28
UBC-214ENST00000546271 LAD1O00515 517 aa13.31□□□□□ -0.28
UBC-214ENST00000546271 HOXA2O43364 376 aa13.31□□□□□ -0.28
UBC-214ENST00000546271 USO1O60763 962 aaKnown RBP13.31□□□□□ -0.28
UBC-214ENST00000546271 EOMESO95936 686 aa13.31□□□□□ -0.28
UBC-214ENST00000546271 ATF7P17544 494 aaPredicted RBP13.31□□□□□ -0.28
UBC-214ENST00000546271 MUTP22033 750 aa13.31□□□□□ -0.28
UBC-214ENST00000546271 PRPHP41219 470 aa13.31□□□□□ -0.28
UBC-214ENST00000546271 PHKA2P46019 1235 aa13.31□□□□□ -0.28
UBC-214ENST00000546271 ECM1Q16610 540 aa13.31□□□□□ -0.28
UBC-214ENST00000546271 NAALADL2Q58DX5 795 aa13.31□□□□□ -0.28
UBC-214ENST00000546271 HAUS3Q68CZ6 603 aa13.31□□□□□ -0.28
UBC-214ENST00000546271 TWF2Q6IBS0 349 aaKnown RBP13.31□□□□□ -0.28
UBC-214ENST00000546271 ABI1Q8IZP0 508 aa13.31□□□□□ -0.28
UBC-214ENST00000546271 IGSF22Q8N9C0 903 aa13.31□□□□□ -0.28
UBC-214ENST00000546271 KLHL23Q8NBE8 558 aa13.31□□□□□ -0.28
UBC-214ENST00000546271 RNF169Q8NCN4 708 aa13.31□□□□□ -0.28
UBC-214ENST00000546271 ASAP3Q8TDY4 903 aa13.31□□□□□ -0.28
UBC-214ENST00000546271 CASD1Q96PB1 797 aa13.31□□□□□ -0.28
UBC-214ENST00000546271 TYW1Q9NV66 732 aaKnown RBP13.31□□□□□ -0.28
UBC-214ENST00000546271 HCSTQ9UBK5 93 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms