RNA–Protein interactions for RNA: ENST00000513819.1

NIPBL-207, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 3

Gene NIPBL, Length 452 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-207ENST00000513819 MIER2Q8N344 545 aa5.67□□□□□ -1.5
NIPBL-207ENST00000513819 LINC00482Q8N8I6 264 aa5.67□□□□□ -1.5
NIPBL-207ENST00000513819 KCNN1Q92952 543 aa5.67□□□□□ -1.5
NIPBL-207ENST00000513819 HIST1H2AHQ96KK5 128 aa5.67□□□□□ -1.5
NIPBL-207ENST00000513819 NUP88Q99567 741 aaPredicted RBP5.67□□□□□ -1.5
NIPBL-207ENST00000513819 HIST1H2AJQ99878 128 aa5.67□□□□□ -1.5
NIPBL-207ENST00000513819 ANP32EQ9BTT0 268 aa5.67□□□□□ -1.5
NIPBL-207ENST00000513819 CSRNP2Q9H175 543 aa5.67□□□□□ -1.5
NIPBL-207ENST00000513819 SLTMQ9NWH9 1034 aaKnown RBP eCLIP5.67□□□□□ -1.5
NIPBL-207ENST00000513819 CDC42EP3Q9UKI2 254 aa5.67□□□□□ -1.5
NIPBL-207ENST00000513819 CCDC194A0A1B0GVG4 234 aa5.66□□□□□ -1.5
NIPBL-207ENST00000513819 MAFGO15525 162 aa5.66□□□□□ -1.5
NIPBL-207ENST00000513819 CUTAO60888 179 aa5.66□□□□□ -1.5
NIPBL-207ENST00000513819 KNG1P01042 644 aa5.66□□□□□ -1.5
NIPBL-207ENST00000513819 COL6A1P12109 1028 aa5.66□□□□□ -1.5
NIPBL-207ENST00000513819 MLLT6P55198 1093 aaPredicted RBP5.66□□□□□ -1.5
NIPBL-207ENST00000513819 ADKP55263 362 aaKnown RBP5.66□□□□□ -1.5
NIPBL-207ENST00000513819 ZNF267Q14586 743 aaPredicted RBP5.66□□□□□ -1.5
NIPBL-207ENST00000513819 DGKDQ16760 1214 aa5.66□□□□□ -1.5
NIPBL-207ENST00000513819 UAP1L1Q3KQV9 507 aa5.66□□□□□ -1.5
NIPBL-207ENST00000513819 MINDY4Q4G0A6 757 aa5.66□□□□□ -1.5
NIPBL-207ENST00000513819 IFIT1BQ5T764 474 aaKnown RBP5.66□□□□□ -1.5
NIPBL-207ENST00000513819 CXXC5Q7LFL8 322 aaKnown RBP5.66□□□□□ -1.5
NIPBL-207ENST00000513819 OTOP2Q7RTS6 562 aa5.66□□□□□ -1.5
NIPBL-207ENST00000513819 BMP8AQ7Z5Y6 402 aa5.66□□□□□ -1.5
NIPBL-207ENST00000513819 TMEFF1Q8IYR6 380 aa5.66□□□□□ -1.5
NIPBL-207ENST00000513819 THEMISQ8N1K5 641 aaPredicted RBP5.66□□□□□ -1.5
NIPBL-207ENST00000513819 TTLL6Q8N841 843 aa5.66□□□□□ -1.5
NIPBL-207ENST00000513819 RSAD2Q8WXG1 361 aa5.66□□□□□ -1.5
NIPBL-207ENST00000513819 DYDC2Q96IM9 177 aa5.66□□□□□ -1.5
NIPBL-207ENST00000513819 WRNIP1Q96S55 665 aa5.66□□□□□ -1.5
NIPBL-207ENST00000513819 KRTAP4-12Q9BQ66 201 aa5.66□□□□□ -1.5
NIPBL-207ENST00000513819 FDXACB1Q9BRP7 624 aaPredicted RBP5.66□□□□□ -1.5
NIPBL-207ENST00000513819 DNAI1Q9UI46 699 aa5.66□□□□□ -1.5
NIPBL-207ENST00000513819 PMF1-BGLAPU3KQ54 211 aa5.66□□□□□ -1.5
NIPBL-207ENST00000513819 A0A0A6YYK5 440 aaPredicted RBP5.65□□□□□ -1.5
NIPBL-207ENST00000513819 H0Y858 1186 aa5.65□□□□□ -1.5
NIPBL-207ENST00000513819 AP1G1O43747 822 aa5.65□□□□□ -1.5
NIPBL-207ENST00000513819 MAP4K4O95819 1239 aaPredicted RBP5.65□□□□□ -1.5
NIPBL-207ENST00000513819 U2AF1L5P0DN76 240 aaPredicted RBP5.65□□□□□ -1.5
NIPBL-207ENST00000513819 XPAP23025 273 aaPredicted RBP5.65□□□□□ -1.5
NIPBL-207ENST00000513819 AKAP5P24588 427 aa5.65□□□□□ -1.5
NIPBL-207ENST00000513819 GPR15P49685 360 aa5.65□□□□□ -1.5
NIPBL-207ENST00000513819 FXR1P51114 621 aaKnown RBP eCLIP5.65□□□□□ -1.58e-6■■■□□ 16.6
NIPBL-207ENST00000513819 U2AF1Q01081 240 aaKnown RBP eCLIP5.65□□□□□ -1.5
NIPBL-207ENST00000513819 MAP3K12Q12852 859 aa5.65□□□□□ -1.5
NIPBL-207ENST00000513819 GTF2H3Q13889 308 aa5.65□□□□□ -1.5
NIPBL-207ENST00000513819 ADRM1Q16186 407 aa5.65□□□□□ -1.5
NIPBL-207ENST00000513819 ANO4Q32M45 955 aa5.65□□□□□ -1.5
NIPBL-207ENST00000513819 TRMT10BQ6PF06 316 aaKnown RBP5.65□□□□□ -1.5
NIPBL-207ENST00000513819 BCL6BQ8N143 479 aaPredicted RBP5.65□□□□□ -1.5
NIPBL-207ENST00000513819 ABCF1Q8NE71 845 aaKnown RBP eCLIP5.65□□□□□ -1.5
NIPBL-207ENST00000513819 ZCCHC14Q8WYQ9 949 aaKnown RBP5.65□□□□□ -1.5
NIPBL-207ENST00000513819 COA7Q96BR5 231 aa5.65□□□□□ -1.5
NIPBL-207ENST00000513819 AIFM3Q96NN9 605 aa5.65□□□□□ -1.5
NIPBL-207ENST00000513819 SOX7Q9BT81 388 aa5.65□□□□□ -1.5
NIPBL-207ENST00000513819 GTPBP4Q9BZE4 634 aaKnown RBP5.65□□□□□ -1.5
NIPBL-207ENST00000513819 HAPLN2Q9GZV7 340 aa5.65□□□□□ -1.5
NIPBL-207ENST00000513819 SLC12A5Q9H2X9 1139 aa5.65□□□□□ -1.5
NIPBL-207ENST00000513819 DMRT3Q9NQL9 472 aa5.65□□□□□ -1.5
NIPBL-207ENST00000513819 OBP2AQ9NY56 170 aa5.65□□□□□ -1.5
NIPBL-207ENST00000513819 DNM3Q9UQ16 869 aa5.65□□□□□ -1.5
NIPBL-207ENST00000513819 A0A0G2JNJ9 132 aa5.64□□□□□ -1.51
NIPBL-207ENST00000513819 ETV2O00321 342 aaPredicted RBP5.64□□□□□ -1.51
NIPBL-207ENST00000513819 MAFO75444 373 aaPredicted RBP5.64□□□□□ -1.51
NIPBL-207ENST00000513819 SEC24DO94855 1032 aaPredicted RBP5.64□□□□□ -1.51
NIPBL-207ENST00000513819 POU2F2P09086 479 aa5.64□□□□□ -1.51
NIPBL-207ENST00000513819 HSPA6P17066 643 aa5.64□□□□□ -1.51
NIPBL-207ENST00000513819 STAT5BP51692 787 aa5.64□□□□□ -1.51
NIPBL-207ENST00000513819 KCNQ1P51787 676 aa5.64□□□□□ -1.51
NIPBL-207ENST00000513819 MGAT5Q09328 741 aa5.64□□□□□ -1.51
NIPBL-207ENST00000513819 MALLQ13021 153 aa5.64□□□□□ -1.51
NIPBL-207ENST00000513819 ARHGAP29Q52LW3 1261 aa5.64□□□□□ -1.51
NIPBL-207ENST00000513819 TMEM200BQ69YZ2 307 aa5.64□□□□□ -1.51
NIPBL-207ENST00000513819 LILRA6Q6PI73 481 aa5.64□□□□□ -1.51
NIPBL-207ENST00000513819 SLC4A10Q6U841 1118 aa5.64□□□□□ -1.51
NIPBL-207ENST00000513819 FNIP1Q8TF40 1166 aa5.64□□□□□ -1.51
NIPBL-207ENST00000513819 NRG4Q8WWG1 115 aa5.64□□□□□ -1.51
NIPBL-207ENST00000513819 FATE1Q969F0 183 aa5.64□□□□□ -1.51
NIPBL-207ENST00000513819 SIGLEC10Q96LC7 697 aa5.64□□□□□ -1.51
NIPBL-207ENST00000513819 EPB41L4AQ9HCS5 686 aaPredicted RBP5.64□□□□□ -1.51
NIPBL-207ENST00000513819 NMRK2Q9NPI5 230 aa5.64□□□□□ -1.51
NIPBL-207ENST00000513819 POLR3BQ9NW08 1133 aaPredicted RBP5.64□□□□□ -1.51
NIPBL-207ENST00000513819 SPATA6Q9NWH7 488 aaPredicted RBP5.64□□□□□ -1.51
NIPBL-207ENST00000513819 SAE1Q9UBE0 346 aaPredicted RBP5.64□□□□□ -1.51
NIPBL-207ENST00000513819 Q9UFV3 132 aa5.64□□□□□ -1.51
NIPBL-207ENST00000513819 DDX20Q9UHI6 824 aaKnown RBP5.64□□□□□ -1.51
NIPBL-207ENST00000513819 SYNPO2Q9UMS6 1093 aa5.64□□□□□ -1.51
NIPBL-207ENST00000513819 IRAK3Q9Y616 596 aa5.64□□□□□ -1.51
NIPBL-207ENST00000513819 CCDC154A6NI56 674 aa5.63□□□□□ -1.51
NIPBL-207ENST00000513819 BTBD11A6QL63 1104 aa5.63□□□□□ -1.51
NIPBL-207ENST00000513819 NRP2O60462 931 aa5.63□□□□□ -1.51
NIPBL-207ENST00000513819 CAND2O75155 1236 aa5.63□□□□□ -1.51
NIPBL-207ENST00000513819 OFD1O75665 1012 aa5.63□□□□□ -1.51
NIPBL-207ENST00000513819 MYBP10242 640 aa5.63□□□□□ -1.51
NIPBL-207ENST00000513819 HNRNPLP14866 589 aaKnown RBP eCLIP5.63□□□□□ -1.51
NIPBL-207ENST00000513819 PDCP20941 246 aa5.63□□□□□ -1.51
NIPBL-207ENST00000513819 IL13P35225 146 aa5.63□□□□□ -1.51
NIPBL-207ENST00000513819 SLC16A1P53985 500 aa5.63□□□□□ -1.51
NIPBL-207ENST00000513819 CD69Q07108 199 aa5.63□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 93.4 ms