RNA–Protein interactions for RNA: ENST00000496296.5

FGFR1-223, Transcript of fibroblast growth factor receptor 1, humanhuman

TSL 1 (best)

Gene FGFR1, Length 1,898 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGFR1-223ENST00000496296 CEP72Q9P209 647 aa23.17■■□□□ 1.3
FGFR1-223ENST00000496296 ARHGAP20Q9P2F6 1191 aa23.17■■□□□ 1.3
FGFR1-223ENST00000496296 SEPT9Q9UHD8 586 aaPredicted RBP23.17■■□□□ 1.3
FGFR1-223ENST00000496296 PCDHB13Q9Y5F0 798 aa23.17■■□□□ 1.3
FGFR1-223ENST00000496296 MAFBQ9Y5Q3 323 aaPredicted RBP23.17■■□□□ 1.3
FGFR1-223ENST00000496296 PDXKO00764 312 aa23.16■■□□□ 1.3
FGFR1-223ENST00000496296 PRPF6O94906 941 aaKnown RBP23.16■■□□□ 1.3
FGFR1-223ENST00000496296 NPEPPSP55786 919 aa23.16■■□□□ 1.3
FGFR1-223ENST00000496296 MAPK7Q13164 816 aa23.16■■□□□ 1.3
FGFR1-223ENST00000496296 BMS1Q14692 1282 aaKnown RBP23.16■■□□□ 1.3
FGFR1-223ENST00000496296 PAPD7Q5XG87 772 aaKnown RBP23.16■■□□□ 1.3
FGFR1-223ENST00000496296 MAEAQ7L5Y9 396 aa23.16■■□□□ 1.3
FGFR1-223ENST00000496296 ZNF720Q7Z2F6 126 aa23.16■■□□□ 1.3
FGFR1-223ENST00000496296 TRAPPC11Q7Z392 1133 aa23.16■■□□□ 1.3
FGFR1-223ENST00000496296 KIAA1328Q86T90 577 aa23.16■■□□□ 1.3
FGFR1-223ENST00000496296 NEK11Q8NG66 645 aa23.16■■□□□ 1.3
FGFR1-223ENST00000496296 SCFD2Q8WU76 684 aa23.16■■□□□ 1.3
FGFR1-223ENST00000496296 MMRN2Q9H8L6 949 aa23.16■■□□□ 1.3
FGFR1-223ENST00000496296 SLC5A4Q9NY91 659 aa23.16■■□□□ 1.3
FGFR1-223ENST00000496296 CPA4Q9UI42 421 aa23.16■■□□□ 1.3
FGFR1-223ENST00000496296 ABT1Q9ULW3 272 aaKnown RBP23.16■■□□□ 1.3
FGFR1-223ENST00000496296 GUCA1BQ9UMX6 200 aa23.16■■□□□ 1.3
FGFR1-223ENST00000496296 DIS3Q9Y2L1 958 aaKnown RBP23.16■■□□□ 1.3
FGFR1-223ENST00000496296 TELO2Q9Y4R8 837 aa23.16■■□□□ 1.3
FGFR1-223ENST00000496296 PLXNB2O15031 1838 aa23.16■■□□□ 1.3
FGFR1-223ENST00000496296 SSU72P8A0A1W2PR75 194 aa23.15■■□□□ 1.3
FGFR1-223ENST00000496296 TMEM150BA6NC51 233 aa23.15■■□□□ 1.3
FGFR1-223ENST00000496296 MAPTP10636 758 aaKnown RBP23.15■■□□□ 1.3
FGFR1-223ENST00000496296 NMT1P30419 496 aaKnown RBP23.15■■□□□ 1.3
FGFR1-223ENST00000496296 SREBF2Q12772 1141 aa23.15■■□□□ 1.3
FGFR1-223ENST00000496296 GRB14Q14449 540 aa23.15■■□□□ 1.3
FGFR1-223ENST00000496296 FRMD5Q7Z6J6 570 aa23.15■■□□□ 1.3
FGFR1-223ENST00000496296 CCDC42Q96M95 316 aa23.15■■□□□ 1.3
FGFR1-223ENST00000496296 SH2D3AQ9BRG2 576 aa23.15■■□□□ 1.3
FGFR1-223ENST00000496296 FAM207AQ9NSI2 230 aaPredicted RBP23.15■■□□□ 1.3
FGFR1-223ENST00000496296 TRIM10Q9UDY6 481 aa23.15■■□□□ 1.3
FGFR1-223ENST00000496296 MYO6Q9UM54 1294 aa23.15■■□□□ 1.3
FGFR1-223ENST00000496296 DOCK5Q9H7D0 1870 aa23.15■■□□□ 1.3
FGFR1-223ENST00000496296 IGKV6D-21A0A0A0MT36 114 aa23.15■■□□□ 1.3
FGFR1-223ENST00000496296 ANO9A1A5B4 782 aa23.15■■□□□ 1.3
FGFR1-223ENST00000496296 NOP56O00567 594 aaKnown RBP23.15■■□□□ 1.3
FGFR1-223ENST00000496296 CETN3O15182 167 aa23.15■■□□□ 1.3
FGFR1-223ENST00000496296 DGAT1O75907 488 aa23.15■■□□□ 1.3
FGFR1-223ENST00000496296 TXNP10599 105 aaKnown RBP23.15■■□□□ 1.3
FGFR1-223ENST00000496296 PLS3P13797 630 aa23.15■■□□□ 1.3
FGFR1-223ENST00000496296 ALCAMQ13740 583 aa23.15■■□□□ 1.3
FGFR1-223ENST00000496296 CELF3Q5SZQ8 465 aaKnown RBP23.15■■□□□ 1.3
FGFR1-223ENST00000496296 TEX35Q5T0J7 233 aa23.15■■□□□ 1.3
FGFR1-223ENST00000496296 IFNL1Q8IU54 200 aa23.15■■□□□ 1.3
FGFR1-223ENST00000496296 DHX37Q8IY37 1157 aaKnown RBP23.15■■□□□ 1.3
FGFR1-223ENST00000496296 DAW1Q8N136 415 aa23.15■■□□□ 1.3
FGFR1-223ENST00000496296 MSANTD4Q8NCY6 345 aa23.15■■□□□ 1.3
FGFR1-223ENST00000496296 SLC17A8Q8NDX2 589 aa23.15■■□□□ 1.3
FGFR1-223ENST00000496296 ZMYND15Q9H091 742 aa23.15■■□□□ 1.3
FGFR1-223ENST00000496296 VTA1Q9NP79 307 aa23.15■■□□□ 1.3
FGFR1-223ENST00000496296 TYW1Q9NV66 732 aaKnown RBP23.15■■□□□ 1.3
FGFR1-223ENST00000496296 GSTTP1A0A1W2PQM5 241 aa23.14■■□□□ 1.29
FGFR1-223ENST00000496296 SLC15A5A6NIM6 579 aa23.14■■□□□ 1.29
FGFR1-223ENST00000496296 SPDYE4A6NLX3 237 aa23.14■■□□□ 1.29
FGFR1-223ENST00000496296 ZNF263O14978 683 aa23.14■■□□□ 1.29
FGFR1-223ENST00000496296 STBD1O95210 358 aa23.14■■□□□ 1.29
FGFR1-223ENST00000496296 ARIH2O95376 493 aa23.14■■□□□ 1.29
FGFR1-223ENST00000496296 ZSCAN20P17040 1043 aaPredicted RBP23.14■■□□□ 1.29
FGFR1-223ENST00000496296 HOXD13P35453 343 aa23.14■■□□□ 1.29
FGFR1-223ENST00000496296 ADAM9Q13443 819 aa23.14■■□□□ 1.29
FGFR1-223ENST00000496296 NFIL3Q16649 462 aa23.14■■□□□ 1.29
FGFR1-223ENST00000496296 ASTE1Q2TB18 679 aaPredicted RBP23.14■■□□□ 1.29
FGFR1-223ENST00000496296 FAM102BQ5T8I3 360 aa23.14■■□□□ 1.29
FGFR1-223ENST00000496296 AZI2Q9H6S1 392 aa23.14■■□□□ 1.29
FGFR1-223ENST00000496296 CYP26B1Q9NR63 512 aa23.14■■□□□ 1.29
FGFR1-223ENST00000496296 RCCD1A6NED2 376 aa23.13■■□□□ 1.29
FGFR1-223ENST00000496296 LRRC53A6NM62 1247 aa23.13■■□□□ 1.29
FGFR1-223ENST00000496296 NOL4O94818 638 aa23.13■■□□□ 1.29
FGFR1-223ENST00000496296 OATP04181 439 aa23.13■■□□□ 1.29
FGFR1-223ENST00000496296 RPL13P26373 211 aaKnown RBP23.13■■□□□ 1.29
FGFR1-223ENST00000496296 SPA17Q15506 151 aa23.13■■□□□ 1.29
FGFR1-223ENST00000496296 TMCO3Q6UWJ1 677 aa23.13■■□□□ 1.29
FGFR1-223ENST00000496296 KRT222Q8N1A0 295 aa23.13■■□□□ 1.29
FGFR1-223ENST00000496296 MCPH1Q8NEM0 835 aa23.13■■□□□ 1.29
FGFR1-223ENST00000496296 FIZ1Q96SL8 496 aa23.13■■□□□ 1.29
FGFR1-223ENST00000496296 LACRTQ9GZZ8 138 aa23.13■■□□□ 1.29
FGFR1-223ENST00000496296 UTP18Q9Y5J1 556 aaKnown RBP eCLIP23.13■■□□□ 1.29
FGFR1-223ENST00000496296 K7ENM7 598 aa23.13■■□□□ 1.29
FGFR1-223ENST00000496296 PJA2O43164 708 aa23.13■■□□□ 1.29
FGFR1-223ENST00000496296 TCF7P36402 384 aaPredicted RBP23.13■■□□□ 1.29
FGFR1-223ENST00000496296 STAT5BP51692 787 aa23.13■■□□□ 1.29
FGFR1-223ENST00000496296 CCDC62Q6P9F0 684 aa23.13■■□□□ 1.29
FGFR1-223ENST00000496296 AFAP1L1Q8TED9 768 aa23.13■■□□□ 1.29
FGFR1-223ENST00000496296 KIFAP3Q92845 792 aa23.13■■□□□ 1.29
FGFR1-223ENST00000496296 NRBP2Q9NSY0 501 aa23.13■■□□□ 1.29
FGFR1-223ENST00000496296 FHOD1Q9Y613 1164 aa23.13■■□□□ 1.29
FGFR1-223ENST00000496296 ADGRA2Q96PE1 1338 aa23.12■■□□□ 1.29
FGFR1-223ENST00000496296 RBAK-RBAKDNI3L0D1 243 aa23.12■■□□□ 1.29
FGFR1-223ENST00000496296 SLC16A3O15427 465 aaKnown RBP23.12■■□□□ 1.29
FGFR1-223ENST00000496296 NR2F2P24468 414 aa23.12■■□□□ 1.29
FGFR1-223ENST00000496296 KIF11P52732 1056 aa23.12■■□□□ 1.29
FGFR1-223ENST00000496296 BRD3Q15059 726 aa23.12■■□□□ 1.29
FGFR1-223ENST00000496296 MAMDC4Q6UXC1 1216 aa23.12■■□□□ 1.29
FGFR1-223ENST00000496296 RRAGAQ7L523 313 aa23.12■■□□□ 1.29
FGFR1-223ENST00000496296 SPATA33Q96N06 139 aa23.12■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms