RNA–Protein interactions for RNA: ENST00000486585.1

PCMT1-208, Transcript of protein-L-isoaspartate (D-aspartate) O-methyltransferase, human

TSL 3

Gene PCMT1, Length 801 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PCMT1-208	ENST00000486585	CIITA	P33076	1130 aa		11.1	□□□□□ -0.63
PCMT1-208	ENST00000486585	CLCN5	P51795	746 aa		11.1	□□□□□ -0.63
PCMT1-208	ENST00000486585	JAK3	P52333	1124 aa		11.1	□□□□□ -0.63
PCMT1-208	ENST00000486585	BCAR1	P56945	870 aa		11.1	□□□□□ -0.63
PCMT1-208	ENST00000486585	CLLU1OS	Q5K130	101 aa		11.1	□□□□□ -0.63
PCMT1-208	ENST00000486585	ASTL	Q6HA08	431 aa	Predicted RBP	11.1	□□□□□ -0.63
PCMT1-208	ENST00000486585	KIAA1841	Q6NSI8	718 aa		11.1	□□□□□ -0.63
PCMT1-208	ENST00000486585	GLB1L	Q6UWU2	654 aa		11.1	□□□□□ -0.63
PCMT1-208	ENST00000486585	ZNF598	Q86UK7	904 aa	Known RBP	11.1	□□□□□ -0.63
PCMT1-208	ENST00000486585	VPS52	Q8N1B4	723 aa		11.1	□□□□□ -0.63
PCMT1-208	ENST00000486585	LRRC71	Q8N4P6	559 aa		11.1	□□□□□ -0.63
PCMT1-208	ENST00000486585	LINC01465	Q8N7H1	131 aa		11.1	□□□□□ -0.63
PCMT1-208	ENST00000486585	RDM1	Q8NG50	284 aa		11.1	□□□□□ -0.63
PCMT1-208	ENST00000486585	HELQ	Q8TDG4	1101 aa		11.1	□□□□□ -0.63
PCMT1-208	ENST00000486585	RIT2	Q99578	217 aa		11.1	□□□□□ -0.63
PCMT1-208	ENST00000486585	TRAIP	Q9BWF2	469 aa		11.1	□□□□□ -0.63
PCMT1-208	ENST00000486585	DISC1	Q9NRI5	854 aa		11.1	□□□□□ -0.63
PCMT1-208	ENST00000486585	RNF19A	Q9NV58	838 aa		11.1	□□□□□ -0.63
PCMT1-208	ENST00000486585	DBR1	Q9UK59	544 aa	Known RBP	11.1	□□□□□ -0.63
PCMT1-208	ENST00000486585	IRAK3	Q9Y616	596 aa		11.1	□□□□□ -0.63
PCMT1-208	ENST00000486585	USP34	Q70CQ2	3546 aa		11.1	□□□□□ -0.63
PCMT1-208	ENST00000486585	ZC3H11B	A0A1B0GUI2	810 aa	Predicted RBP	11.09	□□□□□ -0.63
PCMT1-208	ENST00000486585	SPDYE4	A6NLX3	237 aa		11.09	□□□□□ -0.63
PCMT1-208	ENST00000486585	C2CD4D	B7Z1M9	353 aa		11.09	□□□□□ -0.63
PCMT1-208	ENST00000486585	GAS7	O60861	476 aa		11.09	□□□□□ -0.63
PCMT1-208	ENST00000486585	BRD1	O95696	1058 aa		11.09	□□□□□ -0.63
PCMT1-208	ENST00000486585	SFPQ	P23246	707 aa	Known RBP eCLIP	11.09	□□□□□ -0.63	7e-8	■■□□□ 11.6
PCMT1-208	ENST00000486585	PBX3	P40426	434 aa		11.09	□□□□□ -0.63
PCMT1-208	ENST00000486585	NBL1	P41271	181 aa		11.09	□□□□□ -0.63
PCMT1-208	ENST00000486585	METAP2	P50579	478 aa	Known RBP eCLIP	11.09	□□□□□ -0.63
PCMT1-208	ENST00000486585	RAB27A	P51159	221 aa		11.09	□□□□□ -0.63
PCMT1-208	ENST00000486585	GPC3	P51654	580 aa		11.09	□□□□□ -0.63
PCMT1-208	ENST00000486585	USP11	P51784	963 aa		11.09	□□□□□ -0.63
PCMT1-208	ENST00000486585	PRKCE	Q02156	737 aa		11.09	□□□□□ -0.63
PCMT1-208	ENST00000486585	RNASEL	Q05823	741 aa	Known RBP	11.09	□□□□□ -0.63
PCMT1-208	ENST00000486585	COL9A3	Q14050	684 aa	Predicted RBP	11.09	□□□□□ -0.63
PCMT1-208	ENST00000486585	RARS2	Q5T160	578 aa	Known RBP	11.09	□□□□□ -0.63
PCMT1-208	ENST00000486585	ELMSAN1	Q6PJG2	1045 aa		11.09	□□□□□ -0.63
PCMT1-208	ENST00000486585	OTOP3	Q7RTS5	596 aa		11.09	□□□□□ -0.63
PCMT1-208	ENST00000486585	DDX53	Q86TM3	631 aa	Known RBP	11.09	□□□□□ -0.63
PCMT1-208	ENST00000486585	CABP7	Q86V35	215 aa		11.09	□□□□□ -0.63
PCMT1-208	ENST00000486585	CCDC148	Q8NFR7	591 aa		11.09	□□□□□ -0.63
PCMT1-208	ENST00000486585	YTHDC1	Q96MU7	727 aa	Known RBP	11.09	□□□□□ -0.63
PCMT1-208	ENST00000486585	JPH2	Q9BR39	696 aa	Predicted RBP	11.09	□□□□□ -0.63
PCMT1-208	ENST00000486585	C22orf23	Q9BZE7	217 aa		11.09	□□□□□ -0.63
PCMT1-208	ENST00000486585	CYP26B1	Q9NR63	512 aa		11.09	□□□□□ -0.63
PCMT1-208	ENST00000486585	PRPF3	O43395	683 aa	Known RBP	11.08	□□□□□ -0.64
PCMT1-208	ENST00000486585	ZC3H11A	O75152	810 aa	Known RBP eCLIP	11.08	□□□□□ -0.64
PCMT1-208	ENST00000486585	PDGFB	P01127	241 aa	Predicted RBP	11.08	□□□□□ -0.64
PCMT1-208	ENST00000486585	CTSA	P10619	480 aa		11.08	□□□□□ -0.64
PCMT1-208	ENST00000486585	PHKA2	P46019	1235 aa		11.08	□□□□□ -0.64
PCMT1-208	ENST00000486585	XKR3	Q5GH77	459 aa		11.08	□□□□□ -0.64
PCMT1-208	ENST00000486585	TWF2	Q6IBS0	349 aa	Known RBP	11.08	□□□□□ -0.64
PCMT1-208	ENST00000486585	ZNF410	Q86VK4	478 aa		11.08	□□□□□ -0.64
PCMT1-208	ENST00000486585	EXOC8	Q8IYI6	725 aa		11.08	□□□□□ -0.64
PCMT1-208	ENST00000486585	PGBD4	Q96DM1	585 aa		11.08	□□□□□ -0.64
PCMT1-208	ENST00000486585	TEKT3	Q9BXF9	490 aa		11.08	□□□□□ -0.64
PCMT1-208	ENST00000486585	EMILIN2	Q9BXX0	1053 aa		11.08	□□□□□ -0.64
PCMT1-208	ENST00000486585	ZBP1	Q9H171	429 aa		11.08	□□□□□ -0.64
PCMT1-208	ENST00000486585	SFXN1	Q9H9B4	322 aa		11.08	□□□□□ -0.64
PCMT1-208	ENST00000486585	FAM217B	Q9NTX9	383 aa	Predicted RBP	11.08	□□□□□ -0.64
PCMT1-208	ENST00000486585	LIMD1	Q9UGP4	676 aa		11.08	□□□□□ -0.64
PCMT1-208	ENST00000486585	DPP7	Q9UHL4	492 aa		11.08	□□□□□ -0.64
PCMT1-208	ENST00000486585	DENND4A	Q7Z401	1863 aa		11.07	□□□□□ -0.64
PCMT1-208	ENST00000486585	ZNF862	O60290	1169 aa		11.07	□□□□□ -0.64
PCMT1-208	ENST00000486585	ZNF623	O75123	536 aa		11.07	□□□□□ -0.64
PCMT1-208	ENST00000486585	CDC27	P30260	824 aa		11.07	□□□□□ -0.64
PCMT1-208	ENST00000486585	ADD1	P35611	737 aa	Known RBP	11.07	□□□□□ -0.64
PCMT1-208	ENST00000486585	NONO	Q15233	471 aa	Known RBP eCLIP	11.07	□□□□□ -0.64	2e-7	■■■■□ 24.5
PCMT1-208	ENST00000486585	BMP2KL	Q5H9B9	411 aa		11.07	□□□□□ -0.64
PCMT1-208	ENST00000486585	NOMO2	Q5JPE7	1267 aa		11.07	□□□□□ -0.64
PCMT1-208	ENST00000486585	LRCH2	Q5VUJ6	765 aa		11.07	□□□□□ -0.64
PCMT1-208	ENST00000486585	TMEM105	Q8N8V8	129 aa		11.07	□□□□□ -0.64
PCMT1-208	ENST00000486585	URGCP	Q8TCY9	931 aa		11.07	□□□□□ -0.64
PCMT1-208	ENST00000486585	NKD2	Q969F2	451 aa	Predicted RBP	11.07	□□□□□ -0.64
PCMT1-208	ENST00000486585	IGSF21	Q96ID5	467 aa		11.07	□□□□□ -0.64
PCMT1-208	ENST00000486585	CCDC136	Q96JN2	1154 aa		11.07	□□□□□ -0.64
PCMT1-208	ENST00000486585	TCEANC2	Q96MN5	208 aa		11.07	□□□□□ -0.64
PCMT1-208	ENST00000486585	RTP3	Q9BQQ7	232 aa		11.07	□□□□□ -0.64
PCMT1-208	ENST00000486585	NIFK	Q9BYG3	293 aa	Known RBP	11.07	□□□□□ -0.64
PCMT1-208	ENST00000486585	KANSL3	Q9P2N6	904 aa		11.07	□□□□□ -0.64
PCMT1-208	ENST00000486585	SSX2IP	Q9Y2D8	614 aa		11.07	□□□□□ -0.64
PCMT1-208	ENST00000486585	PRR23A	A6NEV1	266 aa		11.06	□□□□□ -0.64
PCMT1-208	ENST00000486585	NT5C1B-RDH14	C9J2C7	533 aa		11.06	□□□□□ -0.64
PCMT1-208	ENST00000486585	MSH4	O15457	936 aa		11.06	□□□□□ -0.64
PCMT1-208	ENST00000486585	ATXN8OS	P0DMR3	200 aa		11.06	□□□□□ -0.64
PCMT1-208	ENST00000486585	TDG	Q13569	410 aa		11.06	□□□□□ -0.64
PCMT1-208	ENST00000486585	TARBP2	Q15633	366 aa	Known RBP	11.06	□□□□□ -0.64
PCMT1-208	ENST00000486585	CYP26C1	Q6V0L0	522 aa		11.06	□□□□□ -0.64
PCMT1-208	ENST00000486585	CCDC149	Q6ZUS6	474 aa		11.06	□□□□□ -0.64
PCMT1-208	ENST00000486585	ERMP1	Q7Z2K6	904 aa		11.06	□□□□□ -0.64
PCMT1-208	ENST00000486585	MIER3	Q7Z3K6	550 aa		11.06	□□□□□ -0.64
PCMT1-208	ENST00000486585	GPR149	Q86SP6	731 aa		11.06	□□□□□ -0.64
PCMT1-208	ENST00000486585	C12orf76	Q8N812	135 aa	Predicted RBP	11.06	□□□□□ -0.64
PCMT1-208	ENST00000486585	SLC22A17	Q8WUG5	538 aa		11.06	□□□□□ -0.64
PCMT1-208	ENST00000486585	SLC5A5	Q92911	643 aa		11.06	□□□□□ -0.64
PCMT1-208	ENST00000486585	LENG9	Q96B70	501 aa		11.06	□□□□□ -0.64
PCMT1-208	ENST00000486585	ZNF668	Q96K58	619 aa	Predicted RBP	11.06	□□□□□ -0.64
PCMT1-208	ENST00000486585	FAM193B	Q96PV7	902 aa	Predicted RBP	11.06	□□□□□ -0.64
PCMT1-208	ENST00000486585	RNF26	Q9BY78	433 aa	Predicted RBP	11.06	□□□□□ -0.64

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