RNA–Protein interactions for RNA: ENST00000441350.2

VPS13B-204, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 1 (best) BASIC

Gene VPS13B, Length 1,626 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-204ENST00000441350 GCNT3O95395 438 aa23.26■■□□□ 1.31
VPS13B-204ENST00000441350 TMOD1P28289 359 aa23.26■■□□□ 1.31
VPS13B-204ENST00000441350 NAMPTP43490 491 aa23.26■■□□□ 1.31
VPS13B-204ENST00000441350 SMTNP53814 917 aa23.26■■□□□ 1.31
VPS13B-204ENST00000441350 LAMTOR4Q0VGL1 99 aa23.26■■□□□ 1.31
VPS13B-204ENST00000441350 IQCB1Q15051 598 aa23.26■■□□□ 1.31
VPS13B-204ENST00000441350 KLHL10Q6JEL2 608 aa23.26■■□□□ 1.31
VPS13B-204ENST00000441350 KIAA0319LQ8IZA0 1049 aa23.26■■□□□ 1.31
VPS13B-204ENST00000441350 TMEM161BQ8NDZ6 487 aa23.26■■□□□ 1.31
VPS13B-204ENST00000441350 ZNF507Q8TCN5 953 aa23.26■■□□□ 1.31
VPS13B-204ENST00000441350 GLT1D1Q96MS3 346 aa23.26■■□□□ 1.31
VPS13B-204ENST00000441350 KMT5AQ9NQR1 393 aa23.26■■□□□ 1.31
VPS13B-204ENST00000441350 A0A1W2PQ45 241 aaPredicted RBP23.25■■□□□ 1.31
VPS13B-204ENST00000441350 A0A1W2PQY0 241 aa23.25■■□□□ 1.31
VPS13B-204ENST00000441350 CCDC169A6NNP5 214 aa23.25■■□□□ 1.31
VPS13B-204ENST00000441350 PSMA7O14818 248 aa23.25■■□□□ 1.31
VPS13B-204ENST00000441350 SLC16A4O15374 487 aa23.25■■□□□ 1.31
VPS13B-204ENST00000441350 GJB1P08034 283 aa23.25■■□□□ 1.31
VPS13B-204ENST00000441350 HOXD13P35453 343 aa23.25■■□□□ 1.31
VPS13B-204ENST00000441350 ZNF200P98182 395 aaPredicted RBP23.25■■□□□ 1.31
VPS13B-204ENST00000441350 ALCAMQ13740 583 aa23.25■■□□□ 1.31
VPS13B-204ENST00000441350 ZC2HC1CQ53FD0 456 aaPredicted RBP23.25■■□□□ 1.31
VPS13B-204ENST00000441350 HAUS6Q7Z4H7 955 aa23.25■■□□□ 1.31
VPS13B-204ENST00000441350 KCNN1Q92952 543 aa23.25■■□□□ 1.31
VPS13B-204ENST00000441350 PCDHB13Q9Y5F0 798 aa23.25■■□□□ 1.31
VPS13B-204ENST00000441350 SMIM35A0A1B0GVV1 85 aa23.24■■□□□ 1.31
VPS13B-204ENST00000441350 K7ENM7 598 aa23.24■■□□□ 1.31
VPS13B-204ENST00000441350 ASAP2O43150 1006 aa23.24■■□□□ 1.31
VPS13B-204ENST00000441350 TREHO43280 583 aa23.24■■□□□ 1.31
VPS13B-204ENST00000441350 KIF20AO95235 890 aa23.24■■□□□ 1.31
VPS13B-204ENST00000441350 SGPL1O95470 568 aa23.24■■□□□ 1.31
VPS13B-204ENST00000441350 GTF2BQ00403 316 aa23.24■■□□□ 1.31
VPS13B-204ENST00000441350 PAK1Q13153 545 aa23.24■■□□□ 1.31
VPS13B-204ENST00000441350 ITGA7Q13683 1181 aa23.24■■□□□ 1.31
VPS13B-204ENST00000441350 CAPSQ13938 189 aa23.24■■□□□ 1.31
VPS13B-204ENST00000441350 GSE1Q14687 1217 aa23.24■■□□□ 1.31
VPS13B-204ENST00000441350 STXBP4Q6ZWJ1 553 aa23.24■■□□□ 1.31
VPS13B-204ENST00000441350 DHX40Q8IX18 779 aaKnown RBP23.24■■□□□ 1.31
VPS13B-204ENST00000441350 NELFBQ8WX92 580 aa23.24■■□□□ 1.31
VPS13B-204ENST00000441350 ARHGAP28Q9P2N2 729 aa23.24■■□□□ 1.31
VPS13B-204ENST00000441350 RWDD2AQ9UIY3 292 aa23.24■■□□□ 1.31
VPS13B-204ENST00000441350 CTNND2Q9UQB3 1225 aa23.24■■□□□ 1.31
VPS13B-204ENST00000441350 UBE4BO95155 1302 aa23.24■■□□□ 1.31
VPS13B-204ENST00000441350 ADGRA3Q8IWK6 1321 aa23.24■■□□□ 1.31
VPS13B-204ENST00000441350 PRPF6O94906 941 aaKnown RBP23.23■■□□□ 1.31
VPS13B-204ENST00000441350 PTPN11Q06124 597 aaPredicted RBP23.23■■□□□ 1.31
VPS13B-204ENST00000441350 CENPPQ6IPU0 288 aa23.23■■□□□ 1.31
VPS13B-204ENST00000441350 GDF6Q6KF10 455 aaPredicted RBP23.23■■□□□ 1.31
VPS13B-204ENST00000441350 KSR1Q8IVT5 923 aa23.23■■□□□ 1.31
VPS13B-204ENST00000441350 RNF214Q8ND24 703 aa23.23■■□□□ 1.31
VPS13B-204ENST00000441350 U2AF1L4Q8WU68 220 aaKnown RBP23.23■■□□□ 1.31
VPS13B-204ENST00000441350 VTI1AQ96AJ9 217 aa23.23■■□□□ 1.31
VPS13B-204ENST00000441350 KIFC3Q9BVG8 833 aa23.23■■□□□ 1.31
VPS13B-204ENST00000441350 SEMA6BQ9H3T3 888 aa23.23■■□□□ 1.31
VPS13B-204ENST00000441350 BRCA2P51587 3418 aa23.23■■□□□ 1.31
VPS13B-204ENST00000441350 FSD2A1L4K1 749 aa23.22■■□□□ 1.31
VPS13B-204ENST00000441350 CYP2C9P11712 490 aa23.22■■□□□ 1.31
VPS13B-204ENST00000441350 SCP2P22307 547 aa23.22■■□□□ 1.31
VPS13B-204ENST00000441350 CCNE1P24864 410 aa23.22■■□□□ 1.31
VPS13B-204ENST00000441350 RUFY4Q6ZNE9 571 aa23.22■■□□□ 1.31
VPS13B-204ENST00000441350 RHPN2Q8IUC4 686 aa23.22■■□□□ 1.31
VPS13B-204ENST00000441350 SLC43A3Q8NBI5 491 aa23.22■■□□□ 1.31
VPS13B-204ENST00000441350 ENOX1Q8TC92 643 aaKnown RBP23.22■■□□□ 1.31
VPS13B-204ENST00000441350 P2RX5Q93086 422 aa23.22■■□□□ 1.31
VPS13B-204ENST00000441350 MAP7D2Q96T17 732 aa23.22■■□□□ 1.31
VPS13B-204ENST00000441350 KCTD10Q9H3F6 313 aa23.22■■□□□ 1.31
VPS13B-204ENST00000441350 LRRIQ4A6NIV6 560 aa23.22■■□□□ 1.31
VPS13B-204ENST00000441350 H0YCG3 227 aa23.22■■□□□ 1.31
VPS13B-204ENST00000441350 IKBKBO14920 756 aa23.22■■□□□ 1.31
VPS13B-204ENST00000441350 PMS1P54277 932 aaKnown RBP23.22■■□□□ 1.31
VPS13B-204ENST00000441350 KCNA1Q09470 495 aa23.22■■□□□ 1.31
VPS13B-204ENST00000441350 NCAPHQ15003 741 aa23.22■■□□□ 1.31
VPS13B-204ENST00000441350 FAM47CQ5HY64 1035 aa23.22■■□□□ 1.31
VPS13B-204ENST00000441350 LUZP1Q86V48 1076 aa23.22■■□□□ 1.31
VPS13B-204ENST00000441350 AOPEPQ8N6M6 819 aa23.22■■□□□ 1.31
VPS13B-204ENST00000441350 HVCN1Q96D96 273 aa23.22■■□□□ 1.31
VPS13B-204ENST00000441350 DENND3A2RUS2 1198 aa23.21■■□□□ 1.31
VPS13B-204ENST00000441350 MNX1P50219 401 aaPredicted RBP23.21■■□□□ 1.31
VPS13B-204ENST00000441350 STX17P56962 302 aa23.21■■□□□ 1.31
VPS13B-204ENST00000441350 POU5F1BQ06416 359 aa23.21■■□□□ 1.31
VPS13B-204ENST00000441350 TFDP1Q14186 410 aa23.21■■□□□ 1.31
VPS13B-204ENST00000441350 KNOP1Q1ED39 458 aaKnown RBP23.21■■□□□ 1.31
VPS13B-204ENST00000441350 ZCWPW2Q504Y3 356 aa23.21■■□□□ 1.31
VPS13B-204ENST00000441350 L1TD1Q5T7N2 865 aaKnown RBP23.21■■□□□ 1.31
VPS13B-204ENST00000441350 CDCA2Q69YH5 1023 aaPredicted RBP23.21■■□□□ 1.31
VPS13B-204ENST00000441350 TTI2Q6NXR4 508 aa23.21■■□□□ 1.31
VPS13B-204ENST00000441350 FOXR2Q6PJQ5 311 aa23.21■■□□□ 1.31
VPS13B-204ENST00000441350 NELFCDQ8IXH7 590 aa23.21■■□□□ 1.31
VPS13B-204ENST00000441350 RNF149Q8NC42 400 aa23.21■■□□□ 1.31
VPS13B-204ENST00000441350 DEPTORQ8TB45 409 aa23.21■■□□□ 1.31
VPS13B-204ENST00000441350 CTAGE1Q96RT6 745 aa23.21■■□□□ 1.31
VPS13B-204ENST00000441350 STARD7Q9NQZ5 370 aa23.21■■□□□ 1.31
VPS13B-204ENST00000441350 AKT3Q9Y243 479 aa23.21■■□□□ 1.31
VPS13B-204ENST00000441350 VTNP04004 478 aa23.2■■□□□ 1.3
VPS13B-204ENST00000441350 SRGAP2CP0DJJ0 459 aa23.2■■□□□ 1.3
VPS13B-204ENST00000441350 ABCD1P33897 745 aa23.2■■□□□ 1.3
VPS13B-204ENST00000441350 MYL5Q02045 173 aa23.2■■□□□ 1.3
VPS13B-204ENST00000441350 TAF2Q6P1X5 1199 aa23.2■■□□□ 1.3
VPS13B-204ENST00000441350 TAS1R3Q7RTX0 852 aa23.2■■□□□ 1.3
VPS13B-204ENST00000441350 FAM49AQ9H0Q0 323 aaPredicted RBP23.2■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms