RNA–Protein interactions for RNA: ENST00000414419.6

RFFL-204, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 4

Gene RFFL, Length 559 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-204ENST00000414419 C5orf67F2Z3F1 127 aa12.48□□□□□ -0.41
RFFL-204ENST00000414419 LAD1O00515 517 aa12.48□□□□□ -0.41
RFFL-204ENST00000414419 DLL1O00548 723 aa12.48□□□□□ -0.41
RFFL-204ENST00000414419 FAM189BP81408 668 aa12.48□□□□□ -0.41
RFFL-204ENST00000414419 LAMTOR4Q0VGL1 99 aa12.48□□□□□ -0.41
RFFL-204ENST00000414419 PTGDRQ13258 359 aa12.48□□□□□ -0.41
RFFL-204ENST00000414419 TFDP1Q14186 410 aa12.48□□□□□ -0.41
RFFL-204ENST00000414419 NBR1Q14596 966 aa12.48□□□□□ -0.41
RFFL-204ENST00000414419 FAM102BQ5T8I3 360 aa12.48□□□□□ -0.41
RFFL-204ENST00000414419 TWF2Q6IBS0 349 aaKnown RBP12.48□□□□□ -0.41
RFFL-204ENST00000414419 SRGAP1Q7Z6B7 1085 aa12.48□□□□□ -0.41
RFFL-204ENST00000414419 CATSPER3Q86XQ3 398 aa12.48□□□□□ -0.41
RFFL-204ENST00000414419 RNF169Q8NCN4 708 aa12.48□□□□□ -0.41
RFFL-204ENST00000414419 PIGOQ8TEQ8 1089 aa12.48□□□□□ -0.41
RFFL-204ENST00000414419 ATXN2LQ8WWM7 1075 aaKnown RBP12.48□□□□□ -0.41
RFFL-204ENST00000414419 CLP1Q92989 425 aaKnown RBP12.48□□□□□ -0.41
RFFL-204ENST00000414419 MRPL38Q96DV4 380 aaKnown RBP12.48□□□□□ -0.41
RFFL-204ENST00000414419 POLR3CQ9BUI4 534 aaPredicted RBP12.48□□□□□ -0.41
RFFL-204ENST00000414419 PLVAPQ9BX97 442 aa12.48□□□□□ -0.41
RFFL-204ENST00000414419 PRDM6Q9NQX0 595 aa12.48□□□□□ -0.41
RFFL-204ENST00000414419 AAASQ9NRG9 546 aa12.48□□□□□ -0.41
RFFL-204ENST00000414419 LRWD1Q9UFC0 647 aa12.48□□□□□ -0.41
RFFL-204ENST00000414419 PIN4Q9Y237 131 aaKnown RBP12.48□□□□□ -0.41
RFFL-204ENST00000414419 PCDHB6Q9Y5E3 794 aa12.48□□□□□ -0.41
RFFL-204ENST00000414419 STK24Q9Y6E0 443 aa12.48□□□□□ -0.41
RFFL-204ENST00000414419 MRPL42Q9Y6G3 142 aaKnown RBP12.48□□□□□ -0.41
RFFL-204ENST00000414419 UNC80Q8N2C7 3258 aa12.48□□□□□ -0.41
RFFL-204ENST00000414419 A0A0C4DFX4 3053 aa12.48□□□□□ -0.41
RFFL-204ENST00000414419 A0A087WWV3 80 aa12.47□□□□□ -0.41
RFFL-204ENST00000414419 A0A0U1RQF3 1178 aa12.47□□□□□ -0.41
RFFL-204ENST00000414419 MED24O75448 989 aa12.47□□□□□ -0.41
RFFL-204ENST00000414419 EOMESO95936 686 aa12.47□□□□□ -0.41
RFFL-204ENST00000414419 SPATA31C1P0DKV0 1188 aa12.47□□□□□ -0.41
RFFL-204ENST00000414419 SKIP12755 728 aa12.47□□□□□ -0.41
RFFL-204ENST00000414419 MUTP22033 750 aa12.47□□□□□ -0.41
RFFL-204ENST00000414419 RPA1P27694 616 aa12.47□□□□□ -0.41
RFFL-204ENST00000414419 CCT6AP40227 531 aaKnown RBP12.47□□□□□ -0.41
RFFL-204ENST00000414419 PHKA2P46019 1235 aa12.47□□□□□ -0.41
RFFL-204ENST00000414419 RARRES1P49788 294 aa12.47□□□□□ -0.41
RFFL-204ENST00000414419 GATMP50440 423 aa12.47□□□□□ -0.41
RFFL-204ENST00000414419 TOB1P50616 345 aaPredicted RBP12.47□□□□□ -0.41
RFFL-204ENST00000414419 FXR2P51116 673 aaKnown RBP eCLIP12.47□□□□□ -0.41
RFFL-204ENST00000414419 MRPS5P82675 430 aaKnown RBP12.47□□□□□ -0.41
RFFL-204ENST00000414419 NCBP1Q09161 790 aaKnown RBP12.47□□□□□ -0.41
RFFL-204ENST00000414419 PDIA5Q14554 519 aa12.47□□□□□ -0.41
RFFL-204ENST00000414419 AAK1Q2M2I8 961 aa12.47□□□□□ -0.41
RFFL-204ENST00000414419 TIGD5Q53EQ6 642 aa12.47□□□□□ -0.41
RFFL-204ENST00000414419 NAALADL2Q58DX5 795 aa12.47□□□□□ -0.41
RFFL-204ENST00000414419 DTHD1Q6ZMT9 781 aa12.47□□□□□ -0.41
RFFL-204ENST00000414419 FERMT3Q86UX7 667 aa12.47□□□□□ -0.41
RFFL-204ENST00000414419 ECHDC2Q86YB7 292 aa12.47□□□□□ -0.41
RFFL-204ENST00000414419 RNF149Q8NC42 400 aa12.47□□□□□ -0.41
RFFL-204ENST00000414419 SYMPKQ92797 1274 aaKnown RBP12.47□□□□□ -0.41
RFFL-204ENST00000414419 IFT122Q9HBG6 1241 aa12.47□□□□□ -0.41
RFFL-204ENST00000414419 COG5Q9UP83 839 aa12.47□□□□□ -0.41
RFFL-204ENST00000414419 PCDHB12Q9Y5F1 795 aa12.47□□□□□ -0.41
RFFL-204ENST00000414419 USO1O60763 962 aaKnown RBP12.46□□□□□ -0.41
RFFL-204ENST00000414419 ERLIN2O94905 339 aa12.46□□□□□ -0.41
RFFL-204ENST00000414419 FGFR1P11362 822 aa12.46□□□□□ -0.41
RFFL-204ENST00000414419 PDCP20941 246 aa12.46□□□□□ -0.41
RFFL-204ENST00000414419 TJAP1Q5JTD0 557 aa12.46□□□□□ -0.41
RFFL-204ENST00000414419 KRT79Q5XKE5 535 aa12.46□□□□□ -0.41
RFFL-204ENST00000414419 C4orf32Q8N8J7 132 aa12.46□□□□□ -0.41
RFFL-204ENST00000414419 MCPH1Q8NEM0 835 aa12.46□□□□□ -0.41
RFFL-204ENST00000414419 P2RX5Q93086 422 aa12.46□□□□□ -0.41
RFFL-204ENST00000414419 HLA-CQ95604 372 aa12.46□□□□□ -0.41
RFFL-204ENST00000414419 TMEM117Q9H0C3 514 aa12.46□□□□□ -0.41
RFFL-204ENST00000414419 LMAN2LQ9H0V9 348 aa12.46□□□□□ -0.41
RFFL-204ENST00000414419 XPNPEP1Q9NQW7 623 aa12.46□□□□□ -0.41
RFFL-204ENST00000414419 DBR1Q9UK59 544 aaKnown RBP12.46□□□□□ -0.41
RFFL-204ENST00000414419 TCF20Q9UGU0 1960 aaKnown RBP12.46□□□□□ -0.41
RFFL-204ENST00000414419 BRWD1Q9NSI6 2320 aa12.45□□□□□ -0.42
RFFL-204ENST00000414419 ARHGEF35A5YM69 484 aa12.45□□□□□ -0.42
RFFL-204ENST00000414419 INO80B-WBP1J3KQ70 363 aa12.45□□□□□ -0.42
RFFL-204ENST00000414419 PRPHP41219 470 aa12.45□□□□□ -0.42
RFFL-204ENST00000414419 RAB27AP51159 221 aa12.45□□□□□ -0.42
RFFL-204ENST00000414419 CUL4AQ13619 759 aa12.45□□□□□ -0.42
RFFL-204ENST00000414419 PCBP1Q15365 356 aaKnown RBP eCLIP12.45□□□□□ -0.42
RFFL-204ENST00000414419 POTEGQ6S5H5 508 aa12.45□□□□□ -0.42
RFFL-204ENST00000414419 MAEAQ7L5Y9 396 aa12.45□□□□□ -0.42
RFFL-204ENST00000414419 SNX29Q8TEQ0 813 aa12.45□□□□□ -0.42
RFFL-204ENST00000414419 NSUN3Q9H649 340 aaKnown RBP12.45□□□□□ -0.42
RFFL-204ENST00000414419 ALG13Q9NP73 1137 aaKnown RBP12.45□□□□□ -0.42
RFFL-204ENST00000414419 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.45□□□□□ -0.42
RFFL-204ENST00000414419 AGPAT5Q9NUQ2 364 aa12.45□□□□□ -0.42
RFFL-204ENST00000414419 TYW1Q9NV66 732 aaKnown RBP12.45□□□□□ -0.42
RFFL-204ENST00000414419 PLAGL2Q9UPG8 496 aa12.45□□□□□ -0.42
RFFL-204ENST00000414419 REV3LO60673 3130 aa12.44□□□□□ -0.42
RFFL-204ENST00000414419 PLXNA4Q9HCM2 1894 aa12.44□□□□□ -0.42
RFFL-204ENST00000414419 VPS37CA5D8V6 355 aaPredicted RBP12.44□□□□□ -0.42
RFFL-204ENST00000414419 GRM6O15303 877 aa12.44□□□□□ -0.42
RFFL-204ENST00000414419 CSPG5O95196 566 aa12.44□□□□□ -0.42
RFFL-204ENST00000414419 LINC00271P0C7V0 271 aa12.44□□□□□ -0.42
RFFL-204ENST00000414419 LAG3P18627 525 aa12.44□□□□□ -0.42
RFFL-204ENST00000414419 ARL2P36404 184 aa12.44□□□□□ -0.42
RFFL-204ENST00000414419 PTENP60484 403 aa12.44□□□□□ -0.42
RFFL-204ENST00000414419 POU5F1BQ06416 359 aa12.44□□□□□ -0.42
RFFL-204ENST00000414419 CSPP1Q1MSJ5 1256 aa12.44□□□□□ -0.42
RFFL-204ENST00000414419 PADI6Q6TGC4 694 aa12.44□□□□□ -0.42
RFFL-204ENST00000414419 THNSL1Q8IYQ7 743 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms