RNA–Protein interactions for RNA: ENST00000404548.5

HDAC11-205, Transcript of histone deacetylase 11, humanhuman

TSL 4 BASIC

Gene HDAC11, Length 577 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC11-205ENST00000404548 TOB2Q14106 344 aaPredicted RBP21.83■■□□□ 1.09
HDAC11-205ENST00000404548 SYCE2Q6PIF2 218 aa21.83■■□□□ 1.09
HDAC11-205ENST00000404548 MIER3Q7Z3K6 550 aa21.83■■□□□ 1.09
HDAC11-205ENST00000404548 ALYREFQ86V81 257 aaKnown RBP21.83■■□□□ 1.09
HDAC11-205ENST00000404548 ZNF410Q86VK4 478 aa21.83■■□□□ 1.09
HDAC11-205ENST00000404548 ETNPPLQ8TBG4 499 aa21.83■■□□□ 1.09
HDAC11-205ENST00000404548 ZNF274Q96GC6 653 aaPredicted RBP21.83■■□□□ 1.09
HDAC11-205ENST00000404548 HIDE1A8MVS5 230 aa21.82■■□□□ 1.08
HDAC11-205ENST00000404548 STBD1O95210 358 aa21.82■■□□□ 1.08
HDAC11-205ENST00000404548 SKIP12755 728 aa21.82■■□□□ 1.08
HDAC11-205ENST00000404548 SFPQP23246 707 aaKnown RBP eCLIP21.82■■□□□ 1.08
HDAC11-205ENST00000404548 TECP42680 631 aa21.82■■□□□ 1.08
HDAC11-205ENST00000404548 DNM2P50570 870 aa21.82■■□□□ 1.08
HDAC11-205ENST00000404548 SSRP1Q08945 709 aaKnown RBP21.82■■□□□ 1.08
HDAC11-205ENST00000404548 SIGLEC14Q08ET2 396 aa21.82■■□□□ 1.08
HDAC11-205ENST00000404548 SMC1AQ14683 1233 aaKnown RBP21.82■■□□□ 1.08
HDAC11-205ENST00000404548 TMC7Q7Z402 723 aa21.82■■□□□ 1.08
HDAC11-205ENST00000404548 BLIDQ8IZY5 108 aa21.82■■□□□ 1.08
HDAC11-205ENST00000404548 MRPL43Q8N983 215 aaKnown RBP21.82■■□□□ 1.08
HDAC11-205ENST00000404548 CASP10Q92851 521 aa21.82■■□□□ 1.08
HDAC11-205ENST00000404548 RPGRIP1Q96KN7 1286 aa21.82■■□□□ 1.08
HDAC11-205ENST00000404548 INO80BQ9C086 356 aaPredicted RBP21.82■■□□□ 1.08
HDAC11-205ENST00000404548 SEPT9Q9UHD8 586 aaPredicted RBP21.82■■□□□ 1.08
HDAC11-205ENST00000404548 USP34Q70CQ2 3546 aa21.81■■□□□ 1.08
HDAC11-205ENST00000404548 PBX3P40426 434 aa21.81■■□□□ 1.08
HDAC11-205ENST00000404548 MRE11P49959 708 aa21.81■■□□□ 1.08
HDAC11-205ENST00000404548 DRP2Q13474 957 aa21.81■■□□□ 1.08
HDAC11-205ENST00000404548 NPY5RQ15761 445 aa21.81■■□□□ 1.08
HDAC11-205ENST00000404548 TPRNQ4KMQ1 711 aa21.81■■□□□ 1.08
HDAC11-205ENST00000404548 HELQQ8TDG4 1101 aa21.81■■□□□ 1.08
HDAC11-205ENST00000404548 PBXIP1Q96AQ6 731 aa21.81■■□□□ 1.08
HDAC11-205ENST00000404548 JPH2Q9BR39 696 aaPredicted RBP21.81■■□□□ 1.08
HDAC11-205ENST00000404548 TM6SF1Q9BZW5 370 aa21.81■■□□□ 1.08
HDAC11-205ENST00000404548 C2orf71A6NGG8 1288 aa21.8■■□□□ 1.08
HDAC11-205ENST00000404548 CPLX1O14810 134 aa21.8■■□□□ 1.08
HDAC11-205ENST00000404548 MAFO75444 373 aaPredicted RBP21.8■■□□□ 1.08
HDAC11-205ENST00000404548 TDP2O95551 362 aa21.8■■□□□ 1.08
HDAC11-205ENST00000404548 PHKA2P46019 1235 aa21.8■■□□□ 1.08
HDAC11-205ENST00000404548 ALDH7A1P49419 539 aaKnown RBP21.8■■□□□ 1.08
HDAC11-205ENST00000404548 ITIH3Q06033 890 aa21.8■■□□□ 1.08
HDAC11-205ENST00000404548 BMS1Q14692 1282 aaKnown RBP21.8■■□□□ 1.08
HDAC11-205ENST00000404548 PTPN21Q16825 1174 aa21.8■■□□□ 1.08
HDAC11-205ENST00000404548 MTERF2Q49AM1 385 aa21.8■■□□□ 1.08
HDAC11-205ENST00000404548 CPLX2Q6PUV4 134 aaKnown RBP21.8■■□□□ 1.08
HDAC11-205ENST00000404548 RNF169Q8NCN4 708 aa21.8■■□□□ 1.08
HDAC11-205ENST00000404548 ZNF668Q96K58 619 aaPredicted RBP21.8■■□□□ 1.08
HDAC11-205ENST00000404548 NECTIN4Q96NY8 510 aa21.8■■□□□ 1.08
HDAC11-205ENST00000404548 PPME1Q9Y570 386 aa21.8■■□□□ 1.08
HDAC11-205ENST00000404548 CYP46A1Q9Y6A2 500 aa21.8■■□□□ 1.08
HDAC11-205ENST00000404548 CACNA1HO95180 2353 aa21.8■■□□□ 1.08
HDAC11-205ENST00000404548 FGFR4P22455 802 aa21.79■■□□□ 1.08
HDAC11-205ENST00000404548 RAB27AP51159 221 aa21.79■■□□□ 1.08
HDAC11-205ENST00000404548 BCAR1P56945 870 aa21.79■■□□□ 1.08
HDAC11-205ENST00000404548 NONOQ15233 471 aaKnown RBP eCLIP21.79■■□□□ 1.08
HDAC11-205ENST00000404548 KRT25Q7Z3Z0 450 aa21.79■■□□□ 1.08
HDAC11-205ENST00000404548 SUGP1Q8IWZ8 645 aaKnown RBP21.79■■□□□ 1.08
HDAC11-205ENST00000404548 FBXL6Q8N531 539 aa21.79■■□□□ 1.08
HDAC11-205ENST00000404548 GJA10Q969M2 543 aa21.79■■□□□ 1.08
HDAC11-205ENST00000404548 TMEM169Q96HH4 297 aa21.79■■□□□ 1.08
HDAC11-205ENST00000404548 NR2E1Q9Y466 385 aa21.79■■□□□ 1.08
HDAC11-205ENST00000404548 HCFC2Q9Y5Z7 792 aa21.79■■□□□ 1.08
HDAC11-205ENST00000404548 IRAK3Q9Y616 596 aa21.79■■□□□ 1.08
HDAC11-205ENST00000404548 A0A087WZ62 844 aa21.78■■□□□ 1.08
HDAC11-205ENST00000404548 ZNF623O75123 536 aa21.78■■□□□ 1.08
HDAC11-205ENST00000404548 POLGP54098 1239 aaPredicted RBP21.78■■□□□ 1.08
HDAC11-205ENST00000404548 PTPN5P54829 565 aa21.78■■□□□ 1.08
HDAC11-205ENST00000404548 PSMC5P62195 406 aa21.78■■□□□ 1.08
HDAC11-205ENST00000404548 PPP2R5CQ13362 524 aa21.78■■□□□ 1.08
HDAC11-205ENST00000404548 GIT2Q14161 759 aa21.78■■□□□ 1.08
HDAC11-205ENST00000404548 LLGL2Q6P1M3 1020 aa21.78■■□□□ 1.08
HDAC11-205ENST00000404548 EXOC8Q8IYI6 725 aa21.78■■□□□ 1.08
HDAC11-205ENST00000404548 ASIC4Q96FT7 647 aa21.78■■□□□ 1.08
HDAC11-205ENST00000404548 FDXACB1Q9BRP7 624 aaPredicted RBP21.78■■□□□ 1.08
HDAC11-205ENST00000404548 ADAM7Q9H2U9 754 aa21.78■■□□□ 1.08
HDAC11-205ENST00000404548 SUCLA2Q9P2R7 463 aaPredicted RBP21.78■■□□□ 1.08
HDAC11-205ENST00000404548 STK39Q9UEW8 545 aa21.78■■□□□ 1.08
HDAC11-205ENST00000404548 DDX25Q9UHL0 483 aaKnown RBP21.78■■□□□ 1.08
HDAC11-205ENST00000404548 DKC1O60832 514 aaKnown RBP eCLIP21.77■■□□□ 1.08
HDAC11-205ENST00000404548 CES5AQ6NT32 575 aa21.77■■□□□ 1.08
HDAC11-205ENST00000404548 GLB1LQ6UWU2 654 aa21.77■■□□□ 1.08
HDAC11-205ENST00000404548 ANO5Q75V66 913 aa21.77■■□□□ 1.08
HDAC11-205ENST00000404548 FAM20AQ96MK3 541 aa21.77■■□□□ 1.08
HDAC11-205ENST00000404548 ZBP1Q9H171 429 aa21.77■■□□□ 1.08
HDAC11-205ENST00000404548 KCNMB3Q9NPA1 279 aa21.77■■□□□ 1.08
HDAC11-205ENST00000404548 PIN4Q9Y237 131 aaKnown RBP21.77■■□□□ 1.08
HDAC11-205ENST00000404548 TMEM150BA6NC51 233 aa21.76■■□□□ 1.07
HDAC11-205ENST00000404548 CLASP2O75122 1294 aaKnown RBP21.76■■□□□ 1.07
HDAC11-205ENST00000404548 CSDE1O75534 798 aaKnown RBP21.76■■□□□ 1.07
HDAC11-205ENST00000404548 GCFC2P16383 781 aaKnown RBP21.76■■□□□ 1.07
HDAC11-205ENST00000404548 TWF2Q6IBS0 349 aaKnown RBP21.76■■□□□ 1.07
HDAC11-205ENST00000404548 PPP4R3AQ6IN85 833 aa21.76■■□□□ 1.07
HDAC11-205ENST00000404548 PRSS33Q8NF86 280 aa21.76■■□□□ 1.07
HDAC11-205ENST00000404548 FAM105AQ9NUU6 356 aa21.76■■□□□ 1.07
HDAC11-205ENST00000404548 DZANK1Q9NVP4 752 aa21.76■■□□□ 1.07
HDAC11-205ENST00000404548 DDX11L8A8MPP1 907 aa21.75■■□□□ 1.07
HDAC11-205ENST00000404548 QARSP47897 775 aaKnown RBP21.75■■□□□ 1.07
HDAC11-205ENST00000404548 DDX53Q86TM3 631 aaKnown RBP21.75■■□□□ 1.07
HDAC11-205ENST00000404548 RHPN2Q8IUC4 686 aa21.75■■□□□ 1.07
HDAC11-205ENST00000404548 SLC7A3Q8WY07 619 aa21.75■■□□□ 1.07
HDAC11-205ENST00000404548 CYP26B1Q9NR63 512 aa21.75■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms