RNA–Protein interactions for RNA: ENST00000329231.8

ATPAF1-201, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2 BASIC

Gene ATPAF1, Length 1,241 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-201ENST00000329231 MRPL42Q9Y6G3 142 aaKnown RBP30.78■■■□□ 2.52
ATPAF1-201ENST00000329231 PRUNE2Q8WUY3 3088 aa30.77■■■□□ 2.52
ATPAF1-201ENST00000329231 LAD1O00515 517 aa30.77■■■□□ 2.52
ATPAF1-201ENST00000329231 TRANK1O15050 2925 aa30.77■■■□□ 2.52
ATPAF1-201ENST00000329231 MED24O75448 989 aa30.77■■■□□ 2.52
ATPAF1-201ENST00000329231 SRGAP2CP0DJJ0 459 aa30.77■■■□□ 2.52
ATPAF1-201ENST00000329231 RPA1P27694 616 aa30.77■■■□□ 2.52
ATPAF1-201ENST00000329231 GATMP50440 423 aa30.77■■■□□ 2.52
ATPAF1-201ENST00000329231 CUL4AQ13619 759 aa30.77■■■□□ 2.52
ATPAF1-201ENST00000329231 HAUS3Q68CZ6 603 aa30.77■■■□□ 2.52
ATPAF1-201ENST00000329231 FERMT3Q86UX7 667 aa30.77■■■□□ 2.52
ATPAF1-201ENST00000329231 MRPL38Q96DV4 380 aaKnown RBP30.77■■■□□ 2.52
ATPAF1-201ENST00000329231 NACC1Q96RE7 527 aa30.77■■■□□ 2.52
ATPAF1-201ENST00000329231 PLVAPQ9BX97 442 aa30.77■■■□□ 2.52
ATPAF1-201ENST00000329231 RAB34Q9BZG1 259 aa30.77■■■□□ 2.52
ATPAF1-201ENST00000329231 HOXA2O43364 376 aa30.76■■■□□ 2.51
ATPAF1-201ENST00000329231 MXD4Q14582 209 aaPredicted RBP30.76■■■□□ 2.51
ATPAF1-201ENST00000329231 FAM102BQ5T8I3 360 aa30.76■■■□□ 2.51
ATPAF1-201ENST00000329231 CATSPER4Q7RTX7 472 aa30.76■■■□□ 2.51
ATPAF1-201ENST00000329231 SRGAP1Q7Z6B7 1085 aa30.76■■■□□ 2.51
ATPAF1-201ENST00000329231 XPNPEP1Q9NQW7 623 aa30.76■■■□□ 2.51
ATPAF1-201ENST00000329231 RALGAPA2Q2PPJ7 1873 aa30.76■■■□□ 2.51
ATPAF1-201ENST00000329231 A0A0U1RQF3 1178 aa30.75■■■□□ 2.51
ATPAF1-201ENST00000329231 TBKBP1A7MCY6 615 aa30.75■■■□□ 2.51
ATPAF1-201ENST00000329231 MUTP22033 750 aa30.75■■■□□ 2.51
ATPAF1-201ENST00000329231 PDIA5Q14554 519 aa30.75■■■□□ 2.51
ATPAF1-201ENST00000329231 ECHDC2Q86YB7 292 aa30.75■■■□□ 2.51
ATPAF1-201ENST00000329231 ATXN2LQ8WWM7 1075 aaKnown RBP30.75■■■□□ 2.51
ATPAF1-201ENST00000329231 EIF4ENIF1Q9NRA8 985 aaKnown RBP30.75■■■□□ 2.51
ATPAF1-201ENST00000329231 LRWD1Q9UFC0 647 aa30.75■■■□□ 2.51
ATPAF1-201ENST00000329231 DBR1Q9UK59 544 aaKnown RBP30.75■■■□□ 2.51
ATPAF1-201ENST00000329231 STK24Q9Y6E0 443 aa30.75■■■□□ 2.51
ATPAF1-201ENST00000329231 A0A087WWV3 80 aa30.74■■■□□ 2.51
ATPAF1-201ENST00000329231 RNF149Q8NC42 400 aa30.74■■■□□ 2.51
ATPAF1-201ENST00000329231 PIN4Q9Y237 131 aaKnown RBP30.74■■■□□ 2.51
ATPAF1-201ENST00000329231 NLRC5Q86WI3 1866 aa30.74■■■□□ 2.51
ATPAF1-201ENST00000329231 ARID2Q68CP9 1835 aa30.73■■■□□ 2.51
ATPAF1-201ENST00000329231 FGFR1P11362 822 aa30.73■■■□□ 2.51
ATPAF1-201ENST00000329231 PRPHP41219 470 aa30.73■■■□□ 2.51
ATPAF1-201ENST00000329231 TFDP1Q14186 410 aa30.73■■■□□ 2.51
ATPAF1-201ENST00000329231 NAALADL2Q58DX5 795 aa30.73■■■□□ 2.51
ATPAF1-201ENST00000329231 TRAIPQ9BWF2 469 aa30.73■■■□□ 2.51
ATPAF1-201ENST00000329231 UNC80Q8N2C7 3258 aa30.72■■■□□ 2.51
ATPAF1-201ENST00000329231 EOMESO95936 686 aa30.72■■■□□ 2.51
ATPAF1-201ENST00000329231 CCT6AP40227 531 aaKnown RBP30.72■■■□□ 2.51
ATPAF1-201ENST00000329231 PHKA2P46019 1235 aa30.72■■■□□ 2.51
ATPAF1-201ENST00000329231 TWF2Q6IBS0 349 aaKnown RBP30.72■■■□□ 2.51
ATPAF1-201ENST00000329231 POTEGQ6S5H5 508 aa30.72■■■□□ 2.51
ATPAF1-201ENST00000329231 IGSF22Q8N9C0 903 aa30.72■■■□□ 2.51
ATPAF1-201ENST00000329231 P2RX5Q93086 422 aa30.72■■■□□ 2.51
ATPAF1-201ENST00000329231 TMEM117Q9H0C3 514 aa30.72■■■□□ 2.51
ATPAF1-201ENST00000329231 LMAN2LQ9H0V9 348 aa30.72■■■□□ 2.51
ATPAF1-201ENST00000329231 USO1O60763 962 aaKnown RBP30.71■■■□□ 2.51
ATPAF1-201ENST00000329231 SKIP12755 728 aa30.71■■■□□ 2.51
ATPAF1-201ENST00000329231 ARL2P36404 184 aa30.71■■■□□ 2.51
ATPAF1-201ENST00000329231 TIGD5Q53EQ6 642 aa30.71■■■□□ 2.51
ATPAF1-201ENST00000329231 SPOUT1Q5T280 376 aaKnown RBP30.71■■■□□ 2.51
ATPAF1-201ENST00000329231 DTHD1Q6ZMT9 781 aa30.71■■■□□ 2.51
ATPAF1-201ENST00000329231 ABI1Q8IZP0 508 aa30.71■■■□□ 2.51
ATPAF1-201ENST00000329231 RNF169Q8NCN4 708 aa30.71■■■□□ 2.51
ATPAF1-201ENST00000329231 AAASQ9NRG9 546 aa30.71■■■□□ 2.51
ATPAF1-201ENST00000329231 COG5Q9UP83 839 aa30.71■■■□□ 2.51
ATPAF1-201ENST00000329231 PDCP20941 246 aa30.7■■■□□ 2.51
ATPAF1-201ENST00000329231 MRPS5P82675 430 aaKnown RBP30.7■■■□□ 2.51
ATPAF1-201ENST00000329231 POU5F1BQ06416 359 aa30.7■■■□□ 2.51
ATPAF1-201ENST00000329231 PCBP1Q15365 356 aaKnown RBP eCLIP30.7■■■□□ 2.51
ATPAF1-201ENST00000329231 MCPH1Q8NEM0 835 aa30.7■■■□□ 2.51
ATPAF1-201ENST00000329231 MINDY3Q9H8M7 445 aa30.7■■■□□ 2.51
ATPAF1-201ENST00000329231 AGPAT5Q9NUQ2 364 aa30.7■■■□□ 2.51
ATPAF1-201ENST00000329231 PTENP60484 403 aa30.69■■■□□ 2.5
ATPAF1-201ENST00000329231 ZNF598Q86UK7 904 aaKnown RBP30.69■■■□□ 2.5
ATPAF1-201ENST00000329231 CASD1Q96PB1 797 aa30.69■■■□□ 2.5
ATPAF1-201ENST00000329231 RNF19AQ9NV58 838 aa30.69■■■□□ 2.5
ATPAF1-201ENST00000329231 TYW1Q9NV66 732 aaKnown RBP30.69■■■□□ 2.5
ATPAF1-201ENST00000329231 PLAGL2Q9UPG8 496 aa30.69■■■□□ 2.5
ATPAF1-201ENST00000329231 PCDHB12Q9Y5F1 795 aa30.69■■■□□ 2.5
ATPAF1-201ENST00000329231 ARHGEF35A5YM69 484 aa30.68■■■□□ 2.5
ATPAF1-201ENST00000329231 DLL1O00548 723 aa30.68■■■□□ 2.5
ATPAF1-201ENST00000329231 GRM6O15303 877 aa30.68■■■□□ 2.5
ATPAF1-201ENST00000329231 RAB27AP51159 221 aa30.68■■■□□ 2.5
ATPAF1-201ENST00000329231 ATP2C1P98194 919 aaPredicted RBP30.68■■■□□ 2.5
ATPAF1-201ENST00000329231 TJAP1Q5JTD0 557 aa30.68■■■□□ 2.5
ATPAF1-201ENST00000329231 ASAP3Q8TDY4 903 aa30.68■■■□□ 2.5
ATPAF1-201ENST00000329231 SNX29Q8TEQ0 813 aa30.68■■■□□ 2.5
ATPAF1-201ENST00000329231 HLA-CQ95604 372 aa30.68■■■□□ 2.5
ATPAF1-201ENST00000329231 POLR3FQ9H1D9 316 aaPredicted RBP30.68■■■□□ 2.5
ATPAF1-201ENST00000329231 ERLIN2O94905 339 aa30.67■■■□□ 2.5
ATPAF1-201ENST00000329231 GLRA2P23416 452 aa30.67■■■□□ 2.5
ATPAF1-201ENST00000329231 CAPSQ13938 189 aa30.67■■■□□ 2.5
ATPAF1-201ENST00000329231 AAK1Q2M2I8 961 aa30.67■■■□□ 2.5
ATPAF1-201ENST00000329231 KRT79Q5XKE5 535 aa30.67■■■□□ 2.5
ATPAF1-201ENST00000329231 PADI6Q6TGC4 694 aa30.67■■■□□ 2.5
ATPAF1-201ENST00000329231 BRAPQ7Z569 592 aa30.67■■■□□ 2.5
ATPAF1-201ENST00000329231 IFNLR1Q8IU57 520 aaPredicted RBP30.67■■■□□ 2.5
ATPAF1-201ENST00000329231 KLHL23Q8NBE8 558 aa30.67■■■□□ 2.5
ATPAF1-201ENST00000329231 ASB2Q96Q27 587 aa30.67■■■□□ 2.5
ATPAF1-201ENST00000329231 FAM105AQ9NUU6 356 aa30.67■■■□□ 2.5
ATPAF1-201ENST00000329231 A0A0C4DFX4 3053 aa30.67■■■□□ 2.5
ATPAF1-201ENST00000329231 FNDC1Q4ZHG4 1894 aaPredicted RBP30.66■■■□□ 2.5
ATPAF1-201ENST00000329231 ATF7P17544 494 aaPredicted RBP30.66■■■□□ 2.5
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms