RNA–Protein interactions for RNA: snR87

snR87, Transcript of C/D box small nucleolar RNA (snoRNA), yeastyeast

Gene snR87, Length 109 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR87snR87 THI80P35202 319 aa-0.54□□□□□ -2.5
snR87snR87 ATH1P48016 1211 aa-0.54□□□□□ -2.5
snR87snR87 SYT1Q06836 1226 aa-0.54□□□□□ -2.5
snR87snR87 RAD53P22216 821 aa-0.55□□□□□ -2.5
snR87snR87 MRM1P25270 412 aa-0.55□□□□□ -2.5
snR87snR87 CUE2P36075 443 aaKnown RBP-0.55□□□□□ -2.5
snR87snR87 SLI15P38283 698 aa-0.55□□□□□ -2.5
snR87snR87 PTP3P40048 928 aa-0.55□□□□□ -2.5
snR87snR87 YJR098CP47139 656 aa-0.55□□□□□ -2.5
snR87snR87 GLO1P50107 326 aa-0.55□□□□□ -2.5
snR87snR87 MRPS35P53292 345 aa-0.55□□□□□ -2.5
snR87snR87 NAM8Q00539 523 aaKnown RBP-0.55□□□□□ -2.5
snR87snR87 HFD1Q04458 532 aa-0.55□□□□□ -2.5
snR87snR87 HOF1Q05080 669 aa-0.55□□□□□ -2.5
snR87snR87 NAB2P32505 525 aaKnown RBP RIP-Chip data-0.56□□□□□ -2.5not detected
snR87snR87 LRG1P35688 1017 aa-0.56□□□□□ -2.5
snR87snR87 STR2P47164 639 aa-0.56□□□□□ -2.5
snR87snR87 ARG82P07250 355 aa-0.57□□□□□ -2.5
snR87snR87 COQ2P32378 372 aa-0.57□□□□□ -2.5
snR87snR87 SOL3P38858 249 aa-0.57□□□□□ -2.5
snR87snR87 NAF1P53919 492 aaKnown RBP-0.57□□□□□ -2.5
snR87snR87 PUS5Q06244 254 aa-0.57□□□□□ -2.5
snR87snR87 FRA1Q07825 749 aa-0.57□□□□□ -2.5
snR87snR87 RAD59Q12223 238 aa-0.57□□□□□ -2.5
snR87snR87 GPM1P00950 247 aaKnown RBP-0.58□□□□□ -2.5
snR87snR87 RRN7P40992 514 aa-0.58□□□□□ -2.5
snR87snR87 ISM1P48526 1002 aa-0.58□□□□□ -2.5
snR87snR87 PSD2P53037 1138 aaKnown RBP-0.58□□□□□ -2.5
snR87snR87 YDR461C-AQ2V2P7 80 aa-0.58□□□□□ -2.5
snR87snR87 TPS3P38426 1054 aaKnown RBP-0.59□□□□□ -2.5
snR87snR87 YIL055CP40523 627 aaKnown RBP-0.59□□□□□ -2.5
snR87snR87 MUK1Q02866 612 aa-0.59□□□□□ -2.5
snR87snR87 CDA2Q06703 312 aa-0.59□□□□□ -2.5
snR87snR87 YLR122CQ12312 125 aa-0.59□□□□□ -2.5
snR87snR87 CDC19P00549 500 aaKnown RBP-0.6□□□□□ -2.51
snR87snR87 PRP6P19735 899 aaPredicted RBP-0.6□□□□□ -2.51
snR87snR87 GCD11P32481 527 aaKnown RBP-0.6□□□□□ -2.51
snR87snR87 DLD1P32891 587 aa-0.6□□□□□ -2.51
snR87snR87 NPL4P33755 580 aa-0.6□□□□□ -2.51
snR87snR87 POL12P38121 705 aaPredicted RBP-0.6□□□□□ -2.51
snR87snR87 AAD14P42884 376 aa-0.6□□□□□ -2.51
snR87snR87 RSM7P47150 247 aa-0.6□□□□□ -2.51
snR87snR87 SLI1P53304 468 aa-0.6□□□□□ -2.51
snR87snR87 PUS9Q12069 462 aa-0.6□□□□□ -2.51
snR87snR87 MCM16Q12262 181 aa-0.6□□□□□ -2.51
snR87snR87 DFG16Q99234 619 aa-0.6□□□□□ -2.51
snR87snR87 CYC7P00045 113 aa-0.61□□□□□ -2.51
snR87snR87 MOD5P07884 428 aa-0.61□□□□□ -2.51
snR87snR87 DIT1P21623 536 aa-0.61□□□□□ -2.51
snR87snR87 RTG3P38165 486 aa-0.61□□□□□ -2.51
snR87snR87 BUD9P53226 547 aa-0.61□□□□□ -2.51
snR87snR87 APJ1P53940 528 aa-0.61□□□□□ -2.51
snR87snR87 YMR265CQ03508 461 aaKnown RBP-0.61□□□□□ -2.51
snR87snR87 AI3P03877 415 aa-0.62□□□□□ -2.51
snR87snR87 CHS2P14180 963 aa-0.62□□□□□ -2.51
snR87snR87 SEC2P17065 759 aa-0.62□□□□□ -2.51
snR87snR87 TSA1P34760 196 aaKnown RBP-0.62□□□□□ -2.51
snR87snR87 YER158CP40095 573 aa-0.62□□□□□ -2.51
snR87snR87 YNR065CP53751 1116 aa-0.62□□□□□ -2.51
snR87snR87 KRE33P53914 1056 aaKnown RBP-0.62□□□□□ -2.51
snR87snR87 CTF4Q01454 927 aa-0.62□□□□□ -2.51
snR87snR87 SYH1Q02875 849 aaKnown RBP-0.62□□□□□ -2.51
snR87snR87 CDC73Q06697 393 aa-0.62□□□□□ -2.51
snR87snR87 NDJ1Q12366 352 aa-0.62□□□□□ -2.51
snR87snR87 TY1A-DR4O74302 440 aa-0.63□□□□□ -2.51
snR87snR87 TY1A-AP0CX57 440 aa-0.63□□□□□ -2.51
snR87snR87 TY1A-PR1P0CX58 440 aa-0.63□□□□□ -2.51
snR87snR87 TY1A-ORP0CX59 440 aa-0.63□□□□□ -2.51
snR87snR87 TY1A-PR2P0CX60 440 aa-0.63□□□□□ -2.51
snR87snR87 TY1A-DR5P0CX65 440 aa-0.63□□□□□ -2.51
snR87snR87 TY1A-ER2P0CX66 440 aa-0.63□□□□□ -2.51
snR87snR87 TY1A-GR3P0CX67 440 aa-0.63□□□□□ -2.51
snR87snR87 TY1A-LR1P0CX68 440 aa-0.63□□□□□ -2.51
snR87snR87 TY1A-MR2P0CX69 440 aa-0.63□□□□□ -2.51
snR87snR87 SAC7P17121 654 aa-0.63□□□□□ -2.51
snR87snR87 PDI1P17967 522 aaKnown RBP-0.63□□□□□ -2.51
snR87snR87 MEP2P41948 499 aa-0.63□□□□□ -2.51
snR87snR87 TY1A-JR2P47099 440 aa-0.63□□□□□ -2.51
snR87snR87 BPL1P48445 690 aaPredicted RBP-0.63□□□□□ -2.51
snR87snR87 MSH6Q03834 1242 aa-0.63□□□□□ -2.51
snR87snR87 TY1A-DR1Q03856 440 aa-0.63□□□□□ -2.51
snR87snR87 TDA9Q04545 1251 aa-0.63□□□□□ -2.51
snR87snR87 TY1A-ML1Q04706 440 aaKnown RBP-0.63□□□□□ -2.51
snR87snR87 TY1A-BRQ12217 440 aa-0.63□□□□□ -2.51
snR87snR87 TY1A-NL2Q12470 440 aa-0.63□□□□□ -2.51
snR87snR87 TY1A-GR2Q12485 440 aa-0.63□□□□□ -2.51
snR87snR87 MDM10P18409 493 aa-0.64□□□□□ -2.51
snR87snR87 KNS1P32350 737 aaPredicted RBP-0.64□□□□□ -2.51
snR87snR87 SHM2P37291 469 aaKnown RBP-0.64□□□□□ -2.51
snR87snR87 SPO74P45819 413 aa-0.64□□□□□ -2.51
snR87snR87 GAP1P19145 602 aaPredicted RBP-0.65□□□□□ -2.51
snR87snR87 NUD1P32336 851 aa-0.65□□□□□ -2.51
snR87snR87 YHL008CP38750 627 aa-0.65□□□□□ -2.51
snR87snR87 RSP5P39940 809 aaKnown RBP-0.65□□□□□ -2.51
snR87snR87 MSE1P48525 536 aa-0.65□□□□□ -2.51
snR87snR87 TRM2P33753 639 aa-0.66□□□□□ -2.52
snR87snR87 CCT4P39078 528 aaKnown RBP-0.66□□□□□ -2.52
snR87snR87 RPP1BP10622 106 aaKnown RBP-0.67□□□□□ -2.52
snR87snR87 PDC5P16467 563 aaKnown RBP-0.67□□□□□ -2.52
snR87snR87 MRT4P33201 236 aaKnown RBP-0.67□□□□□ -2.52
Retrieved 100 of 5,963 RNA–protein pairs in 35.9 ms