RNA–Protein interactions for RNA: YPR107C

YTH1, Transcript of Essential RNA-binding component of cleavage and polyadenylation factor, yeastyeast

Gene YTH1, Length 627 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YTH1YPR107C SPT23P35210 1082 aa10.39□□□□□ -0.75
YTH1YPR107C FIG4P42837 879 aa10.39□□□□□ -0.75
YTH1YPR107C ELP4Q02884 456 aaKnown RBP10.39□□□□□ -0.75
YTH1YPR107C UBX7P38349 436 aa10.38□□□□□ -0.75
YTH1YPR107C UTP13Q05946 817 aaKnown RBP10.38□□□□□ -0.75
YTH1YPR107C PTC2P39966 464 aaKnown RBP10.37□□□□□ -0.75
YTH1YPR107C PRT1P06103 763 aaKnown RBP10.36□□□□□ -0.75
YTH1YPR107C PDC1P06169 563 aaKnown RBP10.36□□□□□ -0.75
YTH1YPR107C HEM3P28789 327 aa10.36□□□□□ -0.75
YTH1YPR107C PHO87P25360 923 aa10.35□□□□□ -0.75
YTH1YPR107C FKH1P40466 484 aa10.35□□□□□ -0.75
YTH1YPR107C HAP4P14064 554 aa10.34□□□□□ -0.75
YTH1YPR107C STM1P39015 273 aaKnown RBP10.34□□□□□ -0.75
YTH1YPR107C PAC1P39946 494 aaKnown RBP10.34□□□□□ -0.75
YTH1YPR107C YPR084WQ06821 456 aa10.34□□□□□ -0.75
YTH1YPR107C SNU71P53207 620 aaKnown RBP10.33□□□□□ -0.76
YTH1YPR107C SEN54Q02825 467 aaPredicted RBP10.33□□□□□ -0.76
YTH1YPR107C PUF6Q04373 656 aaKnown RBP10.33□□□□□ -0.76
YTH1YPR107C YEL077CQ3E7X8 1277 aa10.33□□□□□ -0.76
YTH1YPR107C RRN7P40992 514 aa10.32□□□□□ -0.76
YTH1YPR107C NOP7P53261 605 aaKnown RBP10.32□□□□□ -0.76
YTH1YPR107C SOH1P38633 127 aa10.31□□□□□ -0.76
YTH1YPR107C HXT10P43581 546 aa10.31□□□□□ -0.76
YTH1YPR107C APL6P46682 809 aa10.31□□□□□ -0.76
YTH1YPR107C TPD3P31383 635 aa10.3□□□□□ -0.76
YTH1YPR107C SEC20P28791 383 aa10.29□□□□□ -0.76
YTH1YPR107C SPT16P32558 1035 aaKnown RBP10.29□□□□□ -0.76
YTH1YPR107C YML082WQ04533 649 aaKnown RBP10.29□□□□□ -0.76
YTH1YPR107C YDR344CQ05510 147 aa10.28□□□□□ -0.76
YTH1YPR107C YBL113CQ7M4S9 792 aa10.28□□□□□ -0.76
YTH1YPR107C VAC17P25591 423 aa10.27□□□□□ -0.77
YTH1YPR107C CWC15Q03772 175 aaKnown RBP10.27□□□□□ -0.77
YTH1YPR107C GAS4Q08271 471 aa10.27□□□□□ -0.77
YTH1YPR107C ASF1P32447 279 aa10.26□□□□□ -0.77
YTH1YPR107C KAR5Q04746 504 aa10.26□□□□□ -0.77
YTH1YPR107C TSC13Q99190 310 aa10.26□□□□□ -0.77
YTH1YPR107C RRD1P40454 393 aaKnown RBP10.25□□□□□ -0.77
YTH1YPR107C YFL034WP43564 1073 aa10.25□□□□□ -0.77
YTH1YPR107C YPR015CQ12531 247 aa10.25□□□□□ -0.77
YTH1YPR107C ACS2P52910 683 aaKnown RBP10.24□□□□□ -0.77
YTH1YPR107C AIM44Q99299 758 aa10.22□□□□□ -0.77
YTH1YPR107C PRE3P38624 215 aa10.21□□□□□ -0.77
YTH1YPR107C ERP5P38819 212 aa10.21□□□□□ -0.77
YTH1YPR107C ROM1P53046 1155 aa10.21□□□□□ -0.77
YTH1YPR107C SAS4Q04003 481 aa10.21□□□□□ -0.77
YTH1YPR107C SRS2P12954 1174 aa10.2□□□□□ -0.78
YTH1YPR107C AIR2Q12476 344 aaKnown RBP10.2□□□□□ -0.78
YTH1YPR107C VAN1P23642 535 aa10.19□□□□□ -0.78
YTH1YPR107C RRN6P32786 894 aa10.19□□□□□ -0.78
YTH1YPR107C PNP1Q05788 311 aa10.19□□□□□ -0.78
YTH1YPR107C PDI1P17967 522 aaKnown RBP10.18□□□□□ -0.78
YTH1YPR107C IXR1P33417 597 aa10.18□□□□□ -0.78
YTH1YPR107C TPS3P38426 1054 aaKnown RBP10.18□□□□□ -0.78
YTH1YPR107C ISR1Q06098 443 aaKnown RBP10.18□□□□□ -0.78
YTH1YPR107C MSC6Q08818 692 aaKnown RBP10.18□□□□□ -0.78
YTH1YPR107C TRS33Q99394 268 aa10.18□□□□□ -0.78
YTH1YPR107C PUN1Q06991 263 aa10.17□□□□□ -0.78
YTH1YPR107C MOD5P07884 428 aa10.16□□□□□ -0.78
YTH1YPR107C IPL1P38991 367 aa10.16□□□□□ -0.78
YTH1YPR107C GYP1Q08484 637 aa10.16□□□□□ -0.78
YTH1YPR107C CBC2Q08920 208 aaKnown RBP RIP-Chip data10.16□□□□□ -0.78not detected
YTH1YPR107C FUR4P05316 633 aaKnown RBP10.15□□□□□ -0.78
YTH1YPR107C AIM9P40053 627 aaKnown RBP10.15□□□□□ -0.78
YTH1YPR107C ATG1P53104 897 aa10.15□□□□□ -0.78
YTH1YPR107C BMT6Q12291 365 aa10.15□□□□□ -0.78
YTH1YPR107C TRL1P09880 827 aaKnown RBP10.14□□□□□ -0.79
YTH1YPR107C MIP1P15801 1254 aa10.14□□□□□ -0.79
YTH1YPR107C CHL1P22516 861 aaPredicted RBP10.14□□□□□ -0.79
YTH1YPR107C GRS1P38088 690 aaKnown RBP10.14□□□□□ -0.79
YTH1YPR107C ATG20Q07528 640 aa10.14□□□□□ -0.79
YTH1YPR107C KIP2P28743 706 aa10.13□□□□□ -0.79
YTH1YPR107C HAL5P38970 855 aaKnown RBP10.13□□□□□ -0.79
YTH1YPR107C MRF1P30775 413 aaPredicted RBP10.12□□□□□ -0.79
YTH1YPR107C HDA3Q06623 655 aa10.12□□□□□ -0.79
YTH1YPR107C PPX1P38698 397 aa10.11□□□□□ -0.79
YTH1YPR107C YHL050CP38721 697 aa10.11□□□□□ -0.79
YTH1YPR107C YHR219WP38900 624 aa10.11□□□□□ -0.79
YTH1YPR107C CWH41P53008 833 aa10.11□□□□□ -0.79
YTH1YPR107C SIS1P25294 352 aaKnown RBP10.1□□□□□ -0.79
YTH1YPR107C MDJ2P42834 146 aa10.1□□□□□ -0.79
YTH1YPR107C ITT1Q04638 464 aa10.1□□□□□ -0.79
YTH1YPR107C UBP1P25037 809 aa10.09□□□□□ -0.79
YTH1YPR107C PAM1P37304 830 aaKnown RBP10.09□□□□□ -0.79
YTH1YPR107C MET10P39692 1035 aa10.09□□□□□ -0.79
YTH1YPR107C BOL3P39724 118 aa10.09□□□□□ -0.79
YTH1YPR107C YJL171CP46992 396 aa10.09□□□□□ -0.79
YTH1YPR107C NTH2P35172 780 aa10.08□□□□□ -0.8
YTH1YPR107C ACF4P47129 309 aa10.08□□□□□ -0.8
YTH1YPR107C ALD4P46367 519 aaKnown RBP10.07□□□□□ -0.8
YTH1YPR107C GLO3P38682 493 aaKnown RBP10.06□□□□□ -0.8
YTH1YPR107C EMW1P42842 904 aaKnown RBP10.06□□□□□ -0.8
YTH1YPR107C SYH1Q02875 849 aaKnown RBP10.06□□□□□ -0.8
YTH1YPR107C CYT1P07143 309 aa10.05□□□□□ -0.8
YTH1YPR107C QDR1P40475 563 aa10.05□□□□□ -0.8
YTH1YPR107C RPP2BP02400 110 aaKnown RBP10.04□□□□□ -0.8
YTH1YPR107C RPS6AP0CX37 236 aaKnown RBP10.04□□□□□ -0.8
YTH1YPR107C RPS6BP0CX38 236 aaPredicted RBP10.04□□□□□ -0.8
YTH1YPR107C SPT2P06843 333 aaPredicted RBP10.03□□□□□ -0.8
YTH1YPR107C UTR2P32623 467 aa10.03□□□□□ -0.8
YTH1YPR107C THI12P42883 340 aa10.03□□□□□ -0.8
Retrieved 100 of 5,963 RNA–protein pairs in 14.6 ms