RNA–Protein interactions for RNA: YPR054W

SMK1, Transcript of Middle sporulation-specific mitogen-activated protein kinase (MAPK), yeastyeast

Gene SMK1, Length 1,167 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SMK1YPR054W SIS2P36024 562 aa8.63□□□□□ -1.03
SMK1YPR054W TUM1Q08686 304 aaKnown RBP8.63□□□□□ -1.03
SMK1YPR054W CSC1Q06538 782 aa8.62□□□□□ -1.03
SMK1YPR054W RPC31P17890 251 aa8.6□□□□□ -1.03
SMK1YPR054W YFR016CP43597 1233 aaKnown RBP8.6□□□□□ -1.03
SMK1YPR054W YPR109WQ06104 294 aa8.6□□□□□ -1.03
SMK1YPR054W DNF2Q12675 1612 aa8.59□□□□□ -1.03
SMK1YPR054W MNN4P36044 1178 aa8.59□□□□□ -1.03
SMK1YPR054W EAF7P53911 425 aaKnown RBP8.59□□□□□ -1.03
SMK1YPR054W TFB4Q12004 338 aa8.58□□□□□ -1.04
SMK1YPR054W TY1B-JR2P47100 1755 aaKnown RBP8.58□□□□□ -1.04
SMK1YPR054W TY1B-ER2Q03619 1755 aa8.58□□□□□ -1.04
SMK1YPR054W TY1B-MR1Q04214 1755 aa8.58□□□□□ -1.04
SMK1YPR054W TY1B-MR2Q04670 1755 aaKnown RBP8.58□□□□□ -1.04
SMK1YPR054W TY1B-LR1Q12088 1755 aaKnown RBP8.58□□□□□ -1.04
SMK1YPR054W TY1B-NL1Q12112 1755 aa8.58□□□□□ -1.04
SMK1YPR054W TY1B-GR1Q12141 1755 aa8.58□□□□□ -1.04
SMK1YPR054W TY1B-BLQ12490 1755 aa8.58□□□□□ -1.04
SMK1YPR054W PSE1P32337 1089 aaKnown RBP8.57□□□□□ -1.04
SMK1YPR054W GYP1Q08484 637 aa8.57□□□□□ -1.04
SMK1YPR054W VTH1P40438 1549 aa8.57□□□□□ -1.04
SMK1YPR054W VTH2P40890 1549 aa8.57□□□□□ -1.04
SMK1YPR054W DPS1P04802 557 aaKnown RBP8.55□□□□□ -1.04
SMK1YPR054W GLC3P32775 704 aa8.55□□□□□ -1.04
SMK1YPR054W YBT1P32386 1661 aa8.54□□□□□ -1.04
SMK1YPR054W GCN2P15442 1659 aa8.53□□□□□ -1.04
SMK1YPR054W NUD1P32336 851 aa8.53□□□□□ -1.04
SMK1YPR054W PDR5P33302 1511 aaKnown RBP8.53□□□□□ -1.04
SMK1YPR054W STR2P47164 639 aa8.52□□□□□ -1.05
SMK1YPR054W NTE1Q04958 1679 aa8.52□□□□□ -1.05
SMK1YPR054W SNF7P39929 240 aaKnown RBP8.51□□□□□ -1.05
SMK1YPR054W ISM1P48526 1002 aa8.5□□□□□ -1.05
SMK1YPR054W YNR021WP53723 404 aaKnown RBP8.5□□□□□ -1.05
SMK1YPR054W BUD20Q08004 166 aaPredicted RBP8.49□□□□□ -1.05
SMK1YPR054W RPO21P04050 1733 aaKnown RBP8.49□□□□□ -1.05
SMK1YPR054W FUN12P39730 1002 aaKnown RBP8.48□□□□□ -1.05
SMK1YPR054W SNT2P53127 1403 aa8.47□□□□□ -1.05
SMK1YPR054W NPL4P33755 580 aa8.47□□□□□ -1.05
SMK1YPR054W TEA1P47988 759 aa8.47□□□□□ -1.05
SMK1YPR054W NOP7P53261 605 aaKnown RBP8.47□□□□□ -1.05
SMK1YPR054W ATF2P53296 535 aa8.47□□□□□ -1.05
SMK1YPR054W LEO1P38439 464 aa8.46□□□□□ -1.06
SMK1YPR054W YOR093CQ12275 1648 aa8.46□□□□□ -1.06
SMK1YPR054W YIR014WP40570 242 aa8.45□□□□□ -1.06
SMK1YPR054W CAT8P39113 1433 aa8.45□□□□□ -1.06
SMK1YPR054W GCD11P32481 527 aaKnown RBP8.44□□□□□ -1.06
SMK1YPR054W PRT1P06103 763 aaKnown RBP8.43□□□□□ -1.06
SMK1YPR054W ERF2Q06551 359 aa8.43□□□□□ -1.06
SMK1YPR054W RAS1P01119 309 aa8.42□□□□□ -1.06
SMK1YPR054W ROX1P25042 368 aa8.42□□□□□ -1.06
SMK1YPR054W NIS1P53939 407 aa8.42□□□□□ -1.06
SMK1YPR054W URN1Q06525 465 aaKnown RBP8.42□□□□□ -1.06
SMK1YPR054W GDB1Q06625 1536 aa8.42□□□□□ -1.06
SMK1YPR054W TY3B-IQ7LHG5 1498 aaKnown RBP8.41□□□□□ -1.06
SMK1YPR054W KEX2P13134 814 aa8.41□□□□□ -1.06
SMK1YPR054W SDH2P21801 266 aa8.41□□□□□ -1.06
SMK1YPR054W ORC1P54784 914 aaPredicted RBP8.41□□□□□ -1.06
SMK1YPR054W PDS5Q04264 1277 aa8.41□□□□□ -1.06
SMK1YPR054W TY1A-DR4O74302 440 aa8.4□□□□□ -1.06
SMK1YPR054W TY1A-HP0C2I4 478 aaKnown RBP8.4□□□□□ -1.06
SMK1YPR054W TY1A-AP0CX57 440 aa8.4□□□□□ -1.06
SMK1YPR054W TY1A-PR1P0CX58 440 aa8.4□□□□□ -1.06
SMK1YPR054W TY1A-ORP0CX59 440 aa8.4□□□□□ -1.06
SMK1YPR054W TY1A-PR2P0CX60 440 aa8.4□□□□□ -1.06
SMK1YPR054W TY1A-DR5P0CX65 440 aa8.4□□□□□ -1.06
SMK1YPR054W TY1A-ER2P0CX66 440 aa8.4□□□□□ -1.06
SMK1YPR054W TY1A-GR3P0CX67 440 aa8.4□□□□□ -1.06
SMK1YPR054W TY1A-LR1P0CX68 440 aa8.4□□□□□ -1.06
SMK1YPR054W TY1A-MR2P0CX69 440 aa8.4□□□□□ -1.06
SMK1YPR054W CLB5P30283 435 aa8.4□□□□□ -1.06
SMK1YPR054W FPR3P38911 411 aaKnown RBP8.4□□□□□ -1.06
SMK1YPR054W TY1A-JR2P47099 440 aa8.4□□□□□ -1.06
SMK1YPR054W TY1A-DR1Q03856 440 aa8.4□□□□□ -1.06
SMK1YPR054W SAS4Q04003 481 aa8.4□□□□□ -1.06
SMK1YPR054W TY1A-ML1Q04706 440 aaKnown RBP8.4□□□□□ -1.06
SMK1YPR054W CDC45Q08032 650 aa8.4□□□□□ -1.06
SMK1YPR054W TY1A-BRQ12217 440 aa8.4□□□□□ -1.06
SMK1YPR054W TY1A-NL2Q12470 440 aa8.4□□□□□ -1.06
SMK1YPR054W TY1A-GR2Q12485 440 aa8.4□□□□□ -1.06
SMK1YPR054W ARO1P08566 1588 aaKnown RBP8.39□□□□□ -1.07
SMK1YPR054W QCR6P00127 147 aa8.39□□□□□ -1.07
SMK1YPR054W RPP0P05317 312 aaKnown RBP8.39□□□□□ -1.07
SMK1YPR054W SEC2P17065 759 aa8.39□□□□□ -1.07
SMK1YPR054W SPO14P36126 1683 aa8.39□□□□□ -1.07
SMK1YPR054W RPN1P38764 993 aaKnown RBP8.38□□□□□ -1.07
SMK1YPR054W MET10P39692 1035 aa8.38□□□□□ -1.07
SMK1YPR054W VPS27P40343 622 aaKnown RBP8.37□□□□□ -1.07
SMK1YPR054W FPK1P53739 893 aa8.36□□□□□ -1.07
SMK1YPR054W AIM7Q12156 149 aa8.36□□□□□ -1.07
SMK1YPR054W RVB2Q12464 471 aaKnown RBP8.36□□□□□ -1.07
SMK1YPR054W KIN1P13185 1064 aa8.35□□□□□ -1.07
SMK1YPR054W SCJ1P25303 377 aa8.35□□□□□ -1.07
SMK1YPR054W SLN1P39928 1220 aaPredicted RBP8.35□□□□□ -1.07
SMK1YPR054W AMS1P22855 1083 aa8.34□□□□□ -1.07
SMK1YPR054W RRN7P40992 514 aa8.34□□□□□ -1.07
SMK1YPR054W PAF1P38351 445 aa8.33□□□□□ -1.08
SMK1YPR054W YMR196WQ04336 1088 aa8.33□□□□□ -1.08
SMK1YPR054W TYW1Q08960 810 aaKnown RBP8.33□□□□□ -1.08
SMK1YPR054W AIM44Q99299 758 aa8.33□□□□□ -1.08
SMK1YPR054W DOP1Q03921 1698 aa8.33□□□□□ -1.08
Retrieved 100 of 5,963 RNA–protein pairs in 36 ms