RNA–Protein interactions for RNA: YOR055W

YOR055W, Transcript of Dubious open reading frame, yeast

Gene YOR055W, Length 435 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YOR055W	YOR055W	YRF1-3	P0CX14	1859 aa		3.1	□□□□□ -1.91
YOR055W	YOR055W	YRF1-7	P0CX15	1859 aa		3.1	□□□□□ -1.91
YOR055W	YOR055W	YRF1-6	P53819	1859 aa		3.1	□□□□□ -1.91
YOR055W	YOR055W	NTH2	P35172	780 aa		3.1	□□□□□ -1.91
YOR055W	YOR055W	AKL1	P38080	1108 aa	Known RBP	3.1	□□□□□ -1.91
YOR055W	YOR055W	POL32	P47110	350 aa		3.1	□□□□□ -1.91
YOR055W	YOR055W	DSD1	P53095	428 aa		3.1	□□□□□ -1.91
YOR055W	YOR055W	YBL029C-A	Q3E756	94 aa		3.1	□□□□□ -1.91
YOR055W	YOR055W	YRF1-4	O13559	1382 aa		3.1	□□□□□ -1.91
YOR055W	YOR055W	OPY1	P38271	328 aa		3.09	□□□□□ -1.91
YOR055W	YOR055W	RRT14	P40470	206 aa		3.09	□□□□□ -1.91
YOR055W	YOR055W	FKS3	Q04952	1785 aa		3.09	□□□□□ -1.91
YOR055W	YOR055W	YRF1-2	P40105	1681 aa		3.08	□□□□□ -1.92
YOR055W	YOR055W	PRP5	P21372	849 aa	Predicted RBP	3.08	□□□□□ -1.92
YOR055W	YOR055W	IME2	P32581	645 aa		3.08	□□□□□ -1.92
YOR055W	YOR055W	BUD27	P43573	796 aa	Known RBP RIP-Chip data	3.08	□□□□□ -1.92	not detected
YOR055W	YOR055W	GYP7	P48365	746 aa		3.08	□□□□□ -1.92
YOR055W	YOR055W	ZDS1	P50111	915 aa	Known RBP	3.08	□□□□□ -1.92
YOR055W	YOR055W	YNL050C	P53952	270 aa		3.08	□□□□□ -1.92
YOR055W	YOR055W	PUF6	Q04373	656 aa	Known RBP	3.08	□□□□□ -1.92
YOR055W	YOR055W	SLM3	Q12093	417 aa		3.08	□□□□□ -1.92
YOR055W	YOR055W	SIR4	P11978	1358 aa		3.08	□□□□□ -1.92
YOR055W	YOR055W	TRP5	P00931	707 aa	Known RBP	3.07	□□□□□ -1.92
YOR055W	YOR055W	HSP104	P31539	908 aa	Known RBP	3.07	□□□□□ -1.92
YOR055W	YOR055W	YBR287W	P38355	427 aa		3.07	□□□□□ -1.92
YOR055W	YOR055W	ILV3	P39522	585 aa	Known RBP	3.07	□□□□□ -1.92
YOR055W	YOR055W	YFR016C	P43597	1233 aa	Known RBP	3.07	□□□□□ -1.92
YOR055W	YOR055W	SRT1	Q03175	343 aa		3.07	□□□□□ -1.92
YOR055W	YOR055W	COQ4	O13525	335 aa		3.06	□□□□□ -1.92
YOR055W	YOR055W	PRP45	P28004	379 aa	Predicted RBP	3.06	□□□□□ -1.92
YOR055W	YOR055W	BCH2	P36122	765 aa		3.06	□□□□□ -1.92
YOR055W	YOR055W	PTP3	P40048	928 aa		3.06	□□□□□ -1.92
YOR055W	YOR055W	MAM1	P40065	302 aa		3.06	□□□□□ -1.92
YOR055W	YOR055W	YIR014W	P40570	242 aa		3.06	□□□□□ -1.92
YOR055W	YOR055W	MSB3	P48566	633 aa	Predicted RBP	3.06	□□□□□ -1.92
YOR055W	YOR055W	BMS1	Q08965	1183 aa	Known RBP	3.06	□□□□□ -1.92
YOR055W	YOR055W	MAK21	Q12176	1025 aa	Known RBP	3.06	□□□□□ -1.92
YOR055W	YOR055W	RCR1	P38212	213 aa		3.05	□□□□□ -1.92
YOR055W	YOR055W	XKS1	P42826	600 aa		3.05	□□□□□ -1.92
YOR055W	YOR055W	YPP1	P46951	817 aa		3.05	□□□□□ -1.92
YOR055W	YOR055W	CSI1	Q04368	295 aa		3.05	□□□□□ -1.92
YOR055W	YOR055W	AOS1	Q06624	347 aa		3.05	□□□□□ -1.92
YOR055W	YOR055W	YNG2	P38806	282 aa	Known RBP	3.04	□□□□□ -1.92
YOR055W	YOR055W	YGR122W	P53272	402 aa		3.04	□□□□□ -1.92
YOR055W	YOR055W	CTF4	Q01454	927 aa		3.04	□□□□□ -1.92
YOR055W	YOR055W	TCB1	Q12466	1186 aa		3.04	□□□□□ -1.92
YOR055W	YOR055W	DUR1,2	P32528	1835 aa	Known RBP	3.04	□□□□□ -1.92
YOR055W	YOR055W	NUP145	P49687	1317 aa		3.03	□□□□□ -1.92
YOR055W	YOR055W	RPS19A	P07280	144 aa	Known RBP	3.03	□□□□□ -1.92
YOR055W	YOR055W	RPS19B	P07281	144 aa	Predicted RBP	3.03	□□□□□ -1.92
YOR055W	YOR055W	RAD4	P14736	754 aa		3.03	□□□□□ -1.92
YOR055W	YOR055W	RAD24	P32641	659 aa		3.03	□□□□□ -1.92
YOR055W	YOR055W	ZDS2	P54786	942 aa		3.03	□□□□□ -1.92
YOR055W	YOR055W	NKP2	Q06162	153 aa		3.03	□□□□□ -1.92
YOR055W	YOR055W	YOL057W	Q08225	711 aa		3.03	□□□□□ -1.92
YOR055W	YOR055W	INP54	Q08227	384 aa	Known RBP	3.03	□□□□□ -1.92
YOR055W	YOR055W	EDE1	P34216	1381 aa		3.02	□□□□□ -1.93
YOR055W	YOR055W	PCT1	P13259	424 aa		3.02	□□□□□ -1.93
YOR055W	YOR055W	OSM1	P21375	501 aa	Known RBP	3.02	□□□□□ -1.93
YOR055W	YOR055W	KCC4	P25389	1037 aa		3.02	□□□□□ -1.93
YOR055W	YOR055W	UGA3	P26370	528 aa		3.02	□□□□□ -1.93
YOR055W	YOR055W	SWC3	P31376	625 aa		3.02	□□□□□ -1.93
YOR055W	YOR055W	SPO1	P53541	631 aa		3.02	□□□□□ -1.93
YOR055W	YOR055W	NSE3	Q05541	303 aa		3.02	□□□□□ -1.93
YOR055W	YOR055W	YDR306C	Q06640	478 aa		3.02	□□□□□ -1.93
YOR055W	YOR055W	ENT1	Q12518	454 aa		3.02	□□□□□ -1.93
YOR055W	YOR055W	MRP7	P12687	371 aa		3.01	□□□□□ -1.93
YOR055W	YOR055W	CLC1	P17891	233 aa		3.01	□□□□□ -1.93
YOR055W	YOR055W	GCD7	P32502	381 aa	Predicted RBP	3.01	□□□□□ -1.93
YOR055W	YOR055W	MIF2	P35201	549 aa		3.01	□□□□□ -1.93
YOR055W	YOR055W	RFC1	P38630	861 aa	Known RBP	3.01	□□□□□ -1.93
YOR055W	YOR055W	DJP1	P40564	432 aa		3.01	□□□□□ -1.93
YOR055W	YOR055W	ADE16	P54113	591 aa	Known RBP	3.01	□□□□□ -1.93
YOR055W	YOR055W	NOP8	Q08287	484 aa	Predicted RBP	3.01	□□□□□ -1.93
YOR055W	YOR055W	ALE1	Q08548	619 aa		3.01	□□□□□ -1.93
YOR055W	YOR055W	RLF2	Q12495	606 aa		3.01	□□□□□ -1.93
YOR055W	YOR055W	DLD1	P32891	587 aa		3	□□□□□ -1.93
YOR055W	YOR055W	BRN1	P38170	754 aa		3	□□□□□ -1.93
YOR055W	YOR055W	NMD2	P38798	1089 aa	Known RBP	3	□□□□□ -1.93
YOR055W	YOR055W	BOI2	P39969	1040 aa		3	□□□□□ -1.93
YOR055W	YOR055W	IES2	P40154	320 aa		3	□□□□□ -1.93
YOR055W	YOR055W	EAF7	P53911	425 aa	Known RBP	3	□□□□□ -1.93
YOR055W	YOR055W	APP1	P53933	587 aa		3	□□□□□ -1.93
YOR055W	YOR055W	GCR2	Q01722	534 aa		3	□□□□□ -1.93
YOR055W	YOR055W	ECM16	Q04217	1267 aa	Known RBP	3	□□□□□ -1.93
YOR055W	YOR055W	ENV9	Q08651	330 aa		3	□□□□□ -1.93
YOR055W	YOR055W	TUM1	Q08686	304 aa	Known RBP	3	□□□□□ -1.93
YOR055W	YOR055W	RIM15	P43565	1770 aa		3	□□□□□ -1.93
YOR055W	YOR055W	LYS2	P07702	1392 aa		3	□□□□□ -1.93
YOR055W	YOR055W	RSF2	P46974	1380 aa		3	□□□□□ -1.93
YOR055W	YOR055W	RAD50	P12753	1312 aa		2.99	□□□□□ -1.93
YOR055W	YOR055W	CDC16	P09798	840 aa		2.99	□□□□□ -1.93
YOR055W	YOR055W	YKL133C	P36066	463 aa		2.99	□□□□□ -1.93
YOR055W	YOR055W	HXT13	P39924	564 aa		2.99	□□□□□ -1.93
YOR055W	YOR055W	SNF7	P39929	240 aa	Known RBP	2.99	□□□□□ -1.93
YOR055W	YOR055W	VNX1	P42839	908 aa		2.99	□□□□□ -1.93
YOR055W	YOR055W	HXT10	P43581	546 aa		2.99	□□□□□ -1.93
YOR055W	YOR055W	YJR008W	P47085	338 aa		2.99	□□□□□ -1.93
YOR055W	YOR055W	HXT17	P53631	564 aa		2.99	□□□□□ -1.93
YOR055W	YOR055W	SWI1	P09547	1314 aa		2.98	□□□□□ -1.93

Retrieved 100 of 5,963 RNA–protein pairs in 160.9 ms