RNA–Protein interactions for RNA: YOR036W

PEP12, Transcript of Target membrane receptor (t-SNARE), yeastyeast

Gene PEP12, Length 867 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PEP12YOR036W HPF1Q05164 967 aa6.25□□□□□ -1.41
PEP12YOR036W YJU3P28321 313 aa6.23□□□□□ -1.41
PEP12YOR036W GLN1P32288 370 aaKnown RBP6.23□□□□□ -1.41
PEP12YOR036W YBL086CP38177 466 aa6.23□□□□□ -1.41
PEP12YOR036W AAD14P42884 376 aa6.23□□□□□ -1.41
PEP12YOR036W MTC5Q03897 1148 aa6.23□□□□□ -1.41
PEP12YOR036W ITT1Q04638 464 aa6.23□□□□□ -1.41
PEP12YOR036W ARG82P07250 355 aa6.2□□□□□ -1.42
PEP12YOR036W RSC30P38781 883 aa6.2□□□□□ -1.42
PEP12YOR036W LSC2P53312 427 aa6.2□□□□□ -1.42
PEP12YOR036W APP1P53933 587 aa6.2□□□□□ -1.42
PEP12YOR036W DLD1P32891 587 aa6.19□□□□□ -1.42
PEP12YOR036W YJR098CP47139 656 aa6.19□□□□□ -1.42
PEP12YOR036W ATF2P53296 535 aa6.19□□□□□ -1.42
PEP12YOR036W UBP2Q01476 1272 aa6.17□□□□□ -1.42
PEP12YOR036W KTR1P27810 393 aaKnown RBP6.16□□□□□ -1.42
PEP12YOR036W EMW1P42842 904 aaKnown RBP6.16□□□□□ -1.42
PEP12YOR036W TCB1Q12466 1186 aa6.16□□□□□ -1.42
PEP12YOR036W GLC3P32775 704 aa6.15□□□□□ -1.42
PEP12YOR036W ROG3P43602 733 aa6.14□□□□□ -1.43
PEP12YOR036W TY1A-MR1Q04215 440 aa6.13□□□□□ -1.43
PEP12YOR036W CCP1P00431 361 aa6.12□□□□□ -1.43
PEP12YOR036W OSH7P38755 437 aa6.12□□□□□ -1.43
PEP12YOR036W YNR021WP53723 404 aaKnown RBP6.12□□□□□ -1.43
PEP12YOR036W PKH3Q03306 898 aaPredicted RBP6.12□□□□□ -1.43
PEP12YOR036W FIG4P42837 879 aa6.11□□□□□ -1.43
PEP12YOR036W ARG8P18544 423 aa6.09□□□□□ -1.43
PEP12YOR036W DFG5Q05031 458 aa6.09□□□□□ -1.43
PEP12YOR036W YPR204WQ08995 1032 aa6.09□□□□□ -1.43
PEP12YOR036W MKS1P34072 584 aa6.08□□□□□ -1.44
PEP12YOR036W DPH6Q12429 685 aa6.07□□□□□ -1.44
PEP12YOR036W ICP55P40051 511 aa6.06□□□□□ -1.44
PEP12YOR036W CDC19P00549 500 aaKnown RBP6.04□□□□□ -1.44
PEP12YOR036W NAM8Q00539 523 aaKnown RBP6.04□□□□□ -1.44
PEP12YOR036W YPR084WQ06821 456 aa6.04□□□□□ -1.44
PEP12YOR036W LYS5P50113 272 aa6.03□□□□□ -1.44
PEP12YOR036W FBP26P32604 452 aa6.02□□□□□ -1.45
PEP12YOR036W MDJ1P35191 511 aa6.02□□□□□ -1.45
PEP12YOR036W CSN12P47130 423 aa6.02□□□□□ -1.45
PEP12YOR036W JJJ3P47138 172 aa6.02□□□□□ -1.45
PEP12YOR036W BDS1Q08347 646 aa6.02□□□□□ -1.45
PEP12YOR036W AIM7Q12156 149 aa6.02□□□□□ -1.45
PEP12YOR036W PUS1Q12211 544 aaKnown RBP6.02□□□□□ -1.45
PEP12YOR036W RAD59Q12223 238 aa6.02□□□□□ -1.45
PEP12YOR036W STE6P12866 1290 aa6.01□□□□□ -1.45
PEP12YOR036W TEC1P18412 486 aa6.01□□□□□ -1.45
PEP12YOR036W LSB3P43603 459 aaKnown RBP6.01□□□□□ -1.45
PEP12YOR036W PHM7Q12252 991 aa5.99□□□□□ -1.45
PEP12YOR036W VTC4P47075 721 aa5.96□□□□□ -1.46
PEP12YOR036W CUZ1P53899 274 aa5.95□□□□□ -1.46
PEP12YOR036W YFL066CP43538 392 aa5.94□□□□□ -1.46
PEP12YOR036W NSG2P53898 299 aa5.94□□□□□ -1.46
PEP12YOR036W ISU1Q03020 165 aa5.94□□□□□ -1.46
PEP12YOR036W MAK16P10962 306 aaPredicted RBP5.93□□□□□ -1.46
PEP12YOR036W GUT2P32191 649 aa5.92□□□□□ -1.46
PEP12YOR036W DAL1P32375 460 aa5.92□□□□□ -1.46
PEP12YOR036W ATG20Q07528 640 aa5.92□□□□□ -1.46
PEP12YOR036W THI72Q08579 599 aa5.91□□□□□ -1.46
PEP12YOR036W AI1P03875 834 aa5.89□□□□□ -1.47
PEP12YOR036W FRA1Q07825 749 aa5.89□□□□□ -1.47
PEP12YOR036W CEM1P39525 442 aa5.88□□□□□ -1.47
PEP12YOR036W DLD3P39976 496 aaKnown RBP5.87□□□□□ -1.47
PEP12YOR036W NAF1P53919 492 aaKnown RBP5.87□□□□□ -1.47
PEP12YOR036W SLA1P32790 1244 aa5.86□□□□□ -1.47
PEP12YOR036W CCT8P47079 568 aaKnown RBP5.86□□□□□ -1.47
PEP12YOR036W STE20Q03497 939 aaKnown RBP5.86□□□□□ -1.47
PEP12YOR036W TY1A-DR3Q12441 440 aa5.86□□□□□ -1.47
PEP12YOR036W SSN3P39073 555 aa5.85□□□□□ -1.47
PEP12YOR036W SYT1Q06836 1226 aa5.85□□□□□ -1.47
PEP12YOR036W SSA2P10592 639 aaKnown RBP5.84□□□□□ -1.47
PEP12YOR036W DIT1P21623 536 aa5.84□□□□□ -1.47
PEP12YOR036W UBP15P50101 1230 aa5.84□□□□□ -1.47
PEP12YOR036W WTM2Q12206 467 aa5.84□□□□□ -1.47
PEP12YOR036W MSN5P52918 1224 aa5.83□□□□□ -1.48
PEP12YOR036W YMR265CQ03508 461 aaKnown RBP5.83□□□□□ -1.48
PEP12YOR036W RPP2BP02400 110 aaKnown RBP5.82□□□□□ -1.48
PEP12YOR036W SBE2P42223 864 aaKnown RBP5.81□□□□□ -1.48
PEP12YOR036W APL6P46682 809 aa5.81□□□□□ -1.48
PEP12YOR036W ADE12P80210 433 aaKnown RBP5.81□□□□□ -1.48
PEP12YOR036W ISR1Q06098 443 aaKnown RBP5.81□□□□□ -1.48
PEP12YOR036W YPR053CQ6Q5F3 151 aa5.81□□□□□ -1.48
PEP12YOR036W SPT2P06843 333 aaPredicted RBP5.8□□□□□ -1.48
PEP12YOR036W KIN1P13185 1064 aa5.8□□□□□ -1.48
PEP12YOR036W ISF1P32488 338 aa5.8□□□□□ -1.48
PEP12YOR036W NRD1P53617 575 aaKnown RBP RIP-Chip data5.8□□□□□ -1.48not detected
PEP12YOR036W KRE33P53914 1056 aaKnown RBP5.8□□□□□ -1.48
PEP12YOR036W EMP47P43555 445 aa5.79□□□□□ -1.48
PEP12YOR036W TDA6Q06466 467 aa5.79□□□□□ -1.48
PEP12YOR036W YDR461C-AQ2V2P7 80 aa5.79□□□□□ -1.48
PEP12YOR036W UTR2P32623 467 aa5.78□□□□□ -1.48
PEP12YOR036W HAL5P38970 855 aaKnown RBP5.78□□□□□ -1.48
PEP12YOR036W MCM16Q12262 181 aa5.78□□□□□ -1.48
PEP12YOR036W DAT1P13483 248 aaKnown RBP5.77□□□□□ -1.49
PEP12YOR036W SKN7P38889 622 aa5.77□□□□□ -1.49
PEP12YOR036W AHP1P38013 176 aaKnown RBP5.76□□□□□ -1.49
PEP12YOR036W UTP7P40055 554 aaKnown RBP5.76□□□□□ -1.49
PEP12YOR036W MRX12P47084 519 aa5.76□□□□□ -1.49
PEP12YOR036W CSE4P36012 229 aa5.75□□□□□ -1.49
PEP12YOR036W GUA1P38625 525 aaKnown RBP5.74□□□□□ -1.49
PEP12YOR036W YMR187CQ03236 431 aa5.74□□□□□ -1.49
Retrieved 100 of 5,963 RNA–protein pairs in 32.8 ms