RNA–Protein interactions for RNA: YOL138C

RTC1, Transcript of Subunit of the SEA (Seh1-associated) complex, yeast

Gene RTC1, Length 4,026 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RTC1	YOL138C	YBL086C	P38177	466 aa		5.77	□□□□□ -1.49
RTC1	YOL138C	COB	P00163	385 aa		5.76	□□□□□ -1.49
RTC1	YOL138C	NPR2	P39923	615 aa		5.76	□□□□□ -1.49
RTC1	YOL138C	MAM1	P40065	302 aa		5.76	□□□□□ -1.49
RTC1	YOL138C	KCC4	P25389	1037 aa		5.75	□□□□□ -1.49
RTC1	YOL138C	INP54	Q08227	384 aa	Known RBP	5.75	□□□□□ -1.49
RTC1	YOL138C	GAS4	Q08271	471 aa		5.75	□□□□□ -1.49
RTC1	YOL138C	NUP145	P49687	1317 aa		5.75	□□□□□ -1.49
RTC1	YOL138C	DIB1	Q06819	143 aa	Predicted RBP	5.75	□□□□□ -1.49
RTC1	YOL138C	YNL050C	P53952	270 aa		5.74	□□□□□ -1.49
RTC1	YOL138C	NSE3	Q05541	303 aa		5.74	□□□□□ -1.49
RTC1	YOL138C	SSK22	P25390	1331 aa	Predicted RBP	5.73	□□□□□ -1.49
RTC1	YOL138C	AKL1	P38080	1108 aa	Known RBP	5.73	□□□□□ -1.49
RTC1	YOL138C	ADE16	P54113	591 aa	Known RBP	5.73	□□□□□ -1.49
RTC1	YOL138C	ORC1	P54784	914 aa	Predicted RBP	5.73	□□□□□ -1.49
RTC1	YOL138C	OSM1	P21375	501 aa	Known RBP	5.73	□□□□□ -1.49
RTC1	YOL138C	NST1	P53935	1240 aa		5.73	□□□□□ -1.49
RTC1	YOL138C	RRT14	P40470	206 aa		5.72	□□□□□ -1.49
RTC1	YOL138C	RMT2	Q03305	412 aa		5.72	□□□□□ -1.49
RTC1	YOL138C	HIM1	Q06674	414 aa		5.72	□□□□□ -1.49
RTC1	YOL138C	PHM7	Q12252	991 aa		5.72	□□□□□ -1.49
RTC1	YOL138C	YRB30	P53107	440 aa	Predicted RBP	5.72	□□□□□ -1.49
RTC1	YOL138C	SSP2	Q08646	371 aa		5.72	□□□□□ -1.49
RTC1	YOL138C	SAP155	P43612	1002 aa		5.71	□□□□□ -1.49
RTC1	YOL138C	YBP2	P53169	641 aa		5.71	□□□□□ -1.49
RTC1	YOL138C	FRK1	Q03002	865 aa	Predicted RBP	5.71	□□□□□ -1.5
RTC1	YOL138C	NTH2	P35172	780 aa		5.7	□□□□□ -1.5
RTC1	YOL138C	PAP2	P53632	584 aa	Known RBP	5.7	□□□□□ -1.5
RTC1	YOL138C	GRE2	Q12068	342 aa	Known RBP	5.7	□□□□□ -1.5
RTC1	YOL138C	RPG1	P38249	964 aa	Known RBP	5.69	□□□□□ -1.5
RTC1	YOL138C	CTH1	P47976	325 aa		5.69	□□□□□ -1.5
RTC1	YOL138C	TOS1	P38288	455 aa		5.69	□□□□□ -1.5
RTC1	YOL138C	HSP104	P31539	908 aa	Known RBP	5.68	□□□□□ -1.5
RTC1	YOL138C	SSA1	P10591	642 aa	Known RBP	5.68	□□□□□ -1.5
RTC1	YOL138C	RAT1	Q02792	1006 aa	Known RBP	5.67	□□□□□ -1.5
RTC1	YOL138C	NOP53	Q12080	455 aa	Known RBP	5.67	□□□□□ -1.5
RTC1	YOL138C	CTT1	P06115	562 aa		5.67	□□□□□ -1.5
RTC1	YOL138C	YKL222C	P35995	705 aa		5.67	□□□□□ -1.5
RTC1	YOL138C	RTR1	P40084	226 aa	Predicted RBP	5.66	□□□□□ -1.5
RTC1	YOL138C	LYS4	P49367	693 aa	Predicted RBP	5.66	□□□□□ -1.5
RTC1	YOL138C	ZDS1	P50111	915 aa	Known RBP	5.66	□□□□□ -1.5
RTC1	YOL138C	PRD1	P25375	712 aa		5.65	□□□□□ -1.5
RTC1	YOL138C	PFF1	P38244	976 aa		5.65	□□□□□ -1.5
RTC1	YOL138C	TRK1	P12685	1235 aa		5.65	□□□□□ -1.51
RTC1	YOL138C	YJR008W	P47085	338 aa		5.65	□□□□□ -1.51
RTC1	YOL138C	HGH1	P48362	394 aa	Known RBP	5.64	□□□□□ -1.51
RTC1	YOL138C	BUB1	P41695	1021 aa	Known RBP RIP-Chip data	5.64	□□□□□ -1.51	not detected
RTC1	YOL138C	GYP7	P48365	746 aa		5.64	□□□□□ -1.51
RTC1	YOL138C	UBX2	Q04228	584 aa		5.64	□□□□□ -1.51
RTC1	YOL138C	NYV1	Q12255	253 aa		5.64	□□□□□ -1.51
RTC1	YOL138C	CDC45	Q08032	650 aa		5.64	□□□□□ -1.51
RTC1	YOL138C	ERT1	P38140	529 aa		5.63	□□□□□ -1.51
RTC1	YOL138C	VPS27	P40343	622 aa	Known RBP	5.62	□□□□□ -1.51
RTC1	YOL138C	DNM1	P54861	757 aa		5.62	□□□□□ -1.51
RTC1	YOL138C	YLR271W	Q06152	274 aa		5.62	□□□□□ -1.51
RTC1	YOL138C	YOL057W	Q08225	711 aa		5.62	□□□□□ -1.51
RTC1	YOL138C	GRX6	Q12438	231 aa		5.62	□□□□□ -1.51
RTC1	YOL138C	BUD27	P43573	796 aa	Known RBP RIP-Chip data	5.61	□□□□□ -1.51	not detected
RTC1	YOL138C	PSD2	P53037	1138 aa	Known RBP	5.61	□□□□□ -1.51
RTC1	YOL138C	HPC2	Q01448	625 aa		5.61	□□□□□ -1.51
RTC1	YOL138C	MAK21	Q12176	1025 aa	Known RBP	5.61	□□□□□ -1.51
RTC1	YOL138C	SUP35	P05453	685 aa	Known RBP	5.61	□□□□□ -1.51
RTC1	YOL138C	DAL5	P15365	543 aa		5.61	□□□□□ -1.51
RTC1	YOL138C	ERO1	Q03103	563 aa		5.61	□□□□□ -1.51
RTC1	YOL138C	RRP46	P53256	223 aa	Predicted RBP	5.61	□□□□□ -1.51
RTC1	YOL138C	LPD1	P09624	499 aa	Known RBP	5.6	□□□□□ -1.51
RTC1	YOL138C	HKR1	P41809	1802 aa		5.6	□□□□□ -1.51
RTC1	YOL138C	SIT4	P20604	311 aa		5.6	□□□□□ -1.51
RTC1	YOL138C	SAC3	P46674	1301 aa		5.6	□□□□□ -1.51
RTC1	YOL138C	HAT1	Q12341	374 aa		5.6	□□□□□ -1.51
RTC1	YOL138C	MSN5	P52918	1224 aa		5.59	□□□□□ -1.51
RTC1	YOL138C	YER156C	P40093	338 aa	Known RBP	5.59	□□□□□ -1.51
RTC1	YOL138C	CST6	P40535	587 aa		5.59	□□□□□ -1.51
RTC1	YOL138C	TEA1	P47988	759 aa		5.59	□□□□□ -1.51
RTC1	YOL138C	FIG2	P25653	1609 aa		5.58	□□□□□ -1.52
RTC1	YOL138C	SET1	P38827	1080 aa	Known RBP	5.58	□□□□□ -1.52
RTC1	YOL138C	PSF3	Q12146	194 aa		5.58	□□□□□ -1.52
RTC1	YOL138C	MTC5	Q03897	1148 aa		5.58	□□□□□ -1.52
RTC1	YOL138C	FPK1	P53739	893 aa		5.57	□□□□□ -1.52
RTC1	YOL138C	SYF1	Q04048	859 aa	Predicted RBP	5.57	□□□□□ -1.52
RTC1	YOL138C	YDL144C	Q07589	356 aa		5.57	□□□□□ -1.52
RTC1	YOL138C	HEF3	P53978	1044 aa	Known RBP	5.57	□□□□□ -1.52
RTC1	YOL138C	YDR306C	Q06640	478 aa		5.57	□□□□□ -1.52
RTC1	YOL138C	ALE1	Q08548	619 aa		5.57	□□□□□ -1.52
RTC1	YOL138C	YPP1	P46951	817 aa		5.57	□□□□□ -1.52
RTC1	YOL138C	THI22	Q06490	572 aa		5.57	□□□□□ -1.52
RTC1	YOL138C	IRC3	Q06683	689 aa		5.56	□□□□□ -1.52
RTC1	YOL138C	BDF2	Q07442	638 aa		5.56	□□□□□ -1.52
RTC1	YOL138C	BMS1	Q08965	1183 aa	Known RBP	5.56	□□□□□ -1.52
RTC1	YOL138C	COQ4	O13525	335 aa		5.55	□□□□□ -1.52
RTC1	YOL138C	SHC1	P39000	512 aa		5.55	□□□□□ -1.52
RTC1	YOL138C	TUM1	Q08686	304 aa	Known RBP	5.55	□□□□□ -1.52
RTC1	YOL138C	NAB6	Q03735	1134 aa	Known RBP RIP-Chip data	5.54	□□□□□ -1.52	not detected
RTC1	YOL138C	NUG1	P40010	520 aa	Known RBP	5.53	□□□□□ -1.52
RTC1	YOL138C	MRP7	P12687	371 aa		5.53	□□□□□ -1.52
RTC1	YOL138C	TIF4632	P39936	914 aa	Known RBP	5.53	□□□□□ -1.52
RTC1	YOL138C	ARG8	P18544	423 aa		5.53	□□□□□ -1.52
RTC1	YOL138C	SER1	P33330	395 aa	Known RBP	5.53	□□□□□ -1.52
RTC1	YOL138C	MPP10	P47083	593 aa	Known RBP	5.53	□□□□□ -1.52
RTC1	YOL138C	PEX21	P50091	288 aa		5.52	□□□□□ -1.53

Retrieved 100 of 5,963 RNA–protein pairs in 9.6 ms