RNA–Protein interactions for RNA: YNL132W

KRE33, Transcript of Protein required for biogenesis of the small ribosomal subunit, yeast

Gene KRE33, Length 3,171 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
KRE33	YNL132W	TFG1	P41895	735 aa	Predicted RBP	2.99	□□□□□ -1.93
KRE33	YNL132W	ENT2	Q05785	613 aa		2.99	□□□□□ -1.93
KRE33	YNL132W	KAR1	P11927	433 aa		2.99	□□□□□ -1.93
KRE33	YNL132W	DAL5	P15365	543 aa		2.99	□□□□□ -1.93
KRE33	YNL132W	PKC1	P24583	1151 aa		2.99	□□□□□ -1.93
KRE33	YNL132W	OXP1	P28273	1286 aa		2.99	□□□□□ -1.93
KRE33	YNL132W	BLI1	P35727	113 aa		2.99	□□□□□ -1.93
KRE33	YNL132W	RPL34B	P40525	121 aa	Known RBP	2.99	□□□□□ -1.93
KRE33	YNL132W	IES1	P43579	692 aa		2.99	□□□□□ -1.93
KRE33	YNL132W	OYE2	Q03558	400 aa	Known RBP	2.99	□□□□□ -1.93
KRE33	YNL132W	SSB1	P11484	613 aa	Known RBP	2.98	□□□□□ -1.93
KRE33	YNL132W	REB1	P21538	810 aa		2.98	□□□□□ -1.93
KRE33	YNL132W	SSB2	P40150	613 aa	Known RBP	2.98	□□□□□ -1.93
KRE33	YNL132W	VPS27	P40343	622 aa	Known RBP	2.98	□□□□□ -1.93
KRE33	YNL132W	PLP2	Q12017	286 aa		2.98	□□□□□ -1.93
KRE33	YNL132W	TAF13	P11747	167 aa		2.98	□□□□□ -1.93
KRE33	YNL132W	ATF2	P53296	535 aa		2.98	□□□□□ -1.93
KRE33	YNL132W	VMA4	P22203	233 aa	Known RBP	2.98	□□□□□ -1.93
KRE33	YNL132W	MFT1	P33441	392 aa	Known RBP	2.98	□□□□□ -1.93
KRE33	YNL132W	BOI2	P39969	1040 aa		2.98	□□□□□ -1.93
KRE33	YNL132W	CST9	Q06032	482 aa		2.98	□□□□□ -1.93
KRE33	YNL132W	SEC20	P28791	383 aa		2.97	□□□□□ -1.93
KRE33	YNL132W	IES2	P40154	320 aa		2.97	□□□□□ -1.93
KRE33	YNL132W	ATG32	P40458	529 aa		2.97	□□□□□ -1.93
KRE33	YNL132W	ALD2	P47771	506 aa		2.97	□□□□□ -1.93
KRE33	YNL132W	PSK2	Q08217	1101 aa		2.97	□□□□□ -1.93
KRE33	YNL132W	YOL098C	Q12496	1037 aa		2.97	□□□□□ -1.93
KRE33	YNL132W	DIT2	P21595	489 aa		2.97	□□□□□ -1.93
KRE33	YNL132W	OPI1	P21957	404 aa		2.97	□□□□□ -1.93
KRE33	YNL132W	POL5	P39985	1022 aa	Known RBP	2.97	□□□□□ -1.93
KRE33	YNL132W	HOS4	P40480	1083 aa		2.97	□□□□□ -1.93
KRE33	YNL132W	COG4	Q06096	861 aa		2.97	□□□□□ -1.93
KRE33	YNL132W	SRP40	P32583	406 aa	Predicted RBP	2.96	□□□□□ -1.94
KRE33	YNL132W	GRX7	P38068	203 aa		2.96	□□□□□ -1.94
KRE33	YNL132W	IPL1	P38991	367 aa		2.96	□□□□□ -1.94
KRE33	YNL132W	DNM1	P54861	757 aa		2.96	□□□□□ -1.94
KRE33	YNL132W	ERP4	Q12450	207 aa		2.96	□□□□□ -1.94
KRE33	YNL132W	SEC7	P11075	2009 aa	Known RBP	2.96	□□□□□ -1.94
KRE33	YNL132W	NOP2	P40991	618 aa	Known RBP	2.96	□□□□□ -1.94
KRE33	YNL132W	JIP5	Q06214	492 aa	Predicted RBP	2.96	□□□□□ -1.94
KRE33	YNL132W	YGL081W	P53156	320 aa		2.96	□□□□□ -1.94
KRE33	YNL132W	AAD16	Q02895	342 aa		2.96	□□□□□ -1.94
KRE33	YNL132W	SSF2	Q12153	453 aa	Predicted RBP	2.96	□□□□□ -1.94
KRE33	YNL132W	MAK21	Q12176	1025 aa	Known RBP	2.96	□□□□□ -1.94
KRE33	YNL132W	ERG12	P07277	443 aa		2.95	□□□□□ -1.94
KRE33	YNL132W	YKL091C	P33324	310 aa	Known RBP	2.95	□□□□□ -1.94
KRE33	YNL132W	ISW2	Q08773	1120 aa		2.95	□□□□□ -1.94
KRE33	YNL132W	BIO2	P32451	375 aa		2.95	□□□□□ -1.94
KRE33	YNL132W	POB3	Q04636	552 aa	Known RBP	2.95	□□□□□ -1.94
KRE33	YNL132W	YMR074C	Q04773	145 aa		2.95	□□□□□ -1.94
KRE33	YNL132W	YPR204W	Q08995	1032 aa		2.95	□□□□□ -1.94
KRE33	YNL132W	HAA1	Q12753	694 aa	Known RBP	2.95	□□□□□ -1.94
KRE33	YNL132W	RPN12	P32496	274 aa		2.94	□□□□□ -1.94
KRE33	YNL132W	STM1	P39015	273 aa	Known RBP	2.94	□□□□□ -1.94
KRE33	YNL132W	ALG12	P53730	551 aa		2.94	□□□□□ -1.94
KRE33	YNL132W	ESF2	P53743	316 aa	Known RBP	2.94	□□□□□ -1.94
KRE33	YNL132W	SVF1	Q05515	481 aa		2.94	□□□□□ -1.94
KRE33	YNL132W	NSE3	Q05541	303 aa		2.94	□□□□□ -1.94
KRE33	YNL132W	NOB1	Q08444	459 aa	Known RBP	2.94	□□□□□ -1.94
KRE33	YNL132W	HSP82	P02829	709 aa	Known RBP	2.94	□□□□□ -1.94
KRE33	YNL132W	SPT21	P35209	758 aa		2.94	□□□□□ -1.94
KRE33	YNL132W	TY1B-NL2	Q99337	1749 aa	Known RBP	2.94	□□□□□ -1.94
KRE33	YNL132W	YBT1	P32386	1661 aa		2.94	□□□□□ -1.94
KRE33	YNL132W	TY4B-P	A0A0B7P3V8	1104 aa		2.94	□□□□□ -1.94
KRE33	YNL132W	MAK16	P10962	306 aa	Predicted RBP	2.94	□□□□□ -1.94
KRE33	YNL132W	RAM2	P29703	316 aa		2.94	□□□□□ -1.94
KRE33	YNL132W	TY4A-H	Q6Q5P6	413 aa		2.94	□□□□□ -1.94
KRE33	YNL132W	TRX2	P22803	104 aa	Known RBP	2.93	□□□□□ -1.94
KRE33	YNL132W	SSD1	P24276	1250 aa	Known RBP RIP-Chip data	2.93	□□□□□ -1.94	not detected
KRE33	YNL132W	SYH1	Q02875	849 aa	Known RBP	2.93	□□□□□ -1.94
KRE33	YNL132W	CEF1	Q03654	590 aa	Predicted RBP	2.93	□□□□□ -1.94
KRE33	YNL132W	PUS1	Q12211	544 aa	Known RBP	2.93	□□□□□ -1.94
KRE33	YNL132W	IML1	P47170	1584 aa		2.93	□□□□□ -1.94
KRE33	YNL132W	SEC6	P32844	805 aa		2.93	□□□□□ -1.94
KRE33	YNL132W	NKP1	Q12493	238 aa		2.93	□□□□□ -1.94
KRE33	YNL132W	YGR161W-C	Q3E744	92 aa		2.93	□□□□□ -1.94
KRE33	YNL132W	NUP188	P52593	1655 aa	Known RBP	2.93	□□□□□ -1.94
KRE33	YNL132W	CIT2	P08679	460 aa		2.92	□□□□□ -1.94
KRE33	YNL132W	TIF1	P10081	395 aa	Known RBP	2.92	□□□□□ -1.94
KRE33	YNL132W	PWP2	P25635	923 aa	Known RBP	2.92	□□□□□ -1.94
KRE33	YNL132W	TFC3	P34111	1160 aa		2.92	□□□□□ -1.94
KRE33	YNL132W	TTI1	P36097	1038 aa		2.92	□□□□□ -1.94
KRE33	YNL132W	MAL31	P38156	614 aa		2.92	□□□□□ -1.94
KRE33	YNL132W	POL32	P47110	350 aa		2.92	□□□□□ -1.94
KRE33	YNL132W	UBP3	Q01477	912 aa	Known RBP RIP-Chip data	2.92	□□□□□ -1.94	not detected
KRE33	YNL132W	MDM1	Q01846	1127 aa		2.92	□□□□□ -1.94
KRE33	YNL132W	YML083C	Q04526	418 aa		2.92	□□□□□ -1.94
KRE33	YNL132W	NUP42	P49686	430 aa	Known RBP	2.92	□□□□□ -1.94
KRE33	YNL132W	PRP43	P53131	767 aa	Known RBP	2.92	□□□□□ -1.94
KRE33	YNL132W	SNU66	Q12420	587 aa	Predicted RBP	2.92	□□□□□ -1.94
KRE33	YNL132W	VMA1	P17255	1071 aa	Known RBP	2.92	□□□□□ -1.94
KRE33	YNL132W	BUD31	P25337	157 aa	Predicted RBP	2.92	□□□□□ -1.94
KRE33	YNL132W	GRX4	P32642	244 aa		2.92	□□□□□ -1.94
KRE33	YNL132W	FUI1	P38196	639 aa		2.92	□□□□□ -1.94
KRE33	YNL132W	NMD3	P38861	518 aa	Known RBP	2.92	□□□□□ -1.94
KRE33	YNL132W	VAC8	P39968	578 aa		2.92	□□□□□ -1.94
KRE33	YNL132W	YLR326W	Q06170	240 aa	Known RBP	2.92	□□□□□ -1.94
KRE33	YNL132W	PPH3	P32345	308 aa		2.91	□□□□□ -1.94
KRE33	YNL132W	SWI3	P32591	825 aa		2.91	□□□□□ -1.94
KRE33	YNL132W	MET1	P36150	593 aa		2.91	□□□□□ -1.94

Retrieved 100 of 5,963 RNA–protein pairs in 9.3 ms