RNA–Protein interactions for RNA: YNL088W

TOP2, Transcript of Topoisomerase II, yeast

Gene TOP2, Length 4,287 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TOP2	YNL088W	YJR142W	P47173	342 aa		2.97	□□□□□ -1.93
TOP2	YNL088W	NST1	P53935	1240 aa		2.97	□□□□□ -1.93
TOP2	YNL088W	SRP1	Q02821	542 aa	Known RBP	2.97	□□□□□ -1.93
TOP2	YNL088W	PHM6	Q05637	104 aa		2.97	□□□□□ -1.93
TOP2	YNL088W	YLR257W	Q06146	321 aa	Known RBP	2.97	□□□□□ -1.93
TOP2	YNL088W	MSC6	Q08818	692 aa	Known RBP	2.97	□□□□□ -1.93
TOP2	YNL088W	BRF1	P29056	596 aa		2.97	□□□□□ -1.93
TOP2	YNL088W	MEP1	P40260	492 aa		2.97	□□□□□ -1.93
TOP2	YNL088W	ITC1	P53125	1264 aa		2.97	□□□□□ -1.93
TOP2	YNL088W	TCB1	Q12466	1186 aa		2.97	□□□□□ -1.93
TOP2	YNL088W	RAD51	P25454	400 aa		2.97	□□□□□ -1.93
TOP2	YNL088W	SEC8	P32855	1065 aa		2.97	□□□□□ -1.93
TOP2	YNL088W	VHR2	P40041	505 aa		2.97	□□□□□ -1.93
TOP2	YNL088W	RSM7	P47150	247 aa		2.97	□□□□□ -1.93
TOP2	YNL088W	GPI8	P49018	411 aa		2.97	□□□□□ -1.93
TOP2	YNL088W	YLR326W	Q06170	240 aa	Known RBP	2.97	□□□□□ -1.93
TOP2	YNL088W	STE5	P32917	917 aa		2.96	□□□□□ -1.93
TOP2	YNL088W	TIM54	P47045	478 aa		2.96	□□□□□ -1.93
TOP2	YNL088W	MSH4	P40965	878 aa	Predicted RBP	2.96	□□□□□ -1.94
TOP2	YNL088W	BFA1	P47113	574 aa		2.96	□□□□□ -1.94
TOP2	YNL088W	PRP3	Q03338	469 aa	Predicted RBP	2.96	□□□□□ -1.94
TOP2	YNL088W	YSH1	Q06224	779 aa	Predicted RBP	2.96	□□□□□ -1.94
TOP2	YNL088W	SGT2	Q12118	346 aa	Known RBP	2.96	□□□□□ -1.94
TOP2	YNL088W	MSM1	P22438	575 aa		2.96	□□□□□ -1.94
TOP2	YNL088W	PUP1	P25043	261 aa		2.96	□□□□□ -1.94
TOP2	YNL088W	RPG1	P38249	964 aa	Known RBP	2.96	□□□□□ -1.94
TOP2	YNL088W	UBP12	P39538	1254 aa		2.96	□□□□□ -1.94
TOP2	YNL088W	DAK2	P43550	591 aa		2.96	□□□□□ -1.94
TOP2	YNL088W	ALD3	P54114	506 aa		2.96	□□□□□ -1.94
TOP2	YNL088W	KAR5	Q04746	504 aa		2.96	□□□□□ -1.94
TOP2	YNL088W	FOB1	O13329	566 aa		2.96	□□□□□ -1.94
TOP2	YNL088W	YAP1801	P38856	637 aa		2.96	□□□□□ -1.94
TOP2	YNL088W	CSN12	P47130	423 aa		2.96	□□□□□ -1.94
TOP2	YNL088W	INH1	P01097	85 aa		2.95	□□□□□ -1.94
TOP2	YNL088W	SIT4	P20604	311 aa		2.95	□□□□□ -1.94
TOP2	YNL088W	RPN4	Q03465	531 aa		2.95	□□□□□ -1.94
TOP2	YNL088W	ATG16	Q03818	150 aa		2.95	□□□□□ -1.94
TOP2	YNL088W	SXM1	Q04175	944 aa	Known RBP	2.95	□□□□□ -1.94
TOP2	YNL088W	MCM1	P11746	286 aa		2.95	□□□□□ -1.94
TOP2	YNL088W	SAS3	P34218	831 aa		2.95	□□□□□ -1.94
TOP2	YNL088W	THI12	P42883	340 aa		2.95	□□□□□ -1.94
TOP2	YNL088W	THI5	P43534	340 aa		2.95	□□□□□ -1.94
TOP2	YNL088W	THI11	P47183	340 aa		2.95	□□□□□ -1.94
TOP2	YNL088W	THI13	Q07748	340 aa		2.95	□□□□□ -1.94
TOP2	YNL088W	GRC3	Q07845	632 aa		2.95	□□□□□ -1.94
TOP2	YNL088W	DPS1	P04802	557 aa	Known RBP	2.95	□□□□□ -1.94
TOP2	YNL088W	MET6	P05694	767 aa	Known RBP	2.95	□□□□□ -1.94
TOP2	YNL088W	YDJ1	P25491	409 aa	Known RBP	2.95	□□□□□ -1.94
TOP2	YNL088W	JNM1	P36224	373 aa		2.95	□□□□□ -1.94
TOP2	YNL088W	ERP5	P38819	212 aa		2.95	□□□□□ -1.94
TOP2	YNL088W	VID27	P40157	782 aa		2.95	□□□□□ -1.94
TOP2	YNL088W	ATG1	P53104	897 aa		2.95	□□□□□ -1.94
TOP2	YNL088W	FOL1	P53848	824 aa		2.95	□□□□□ -1.94
TOP2	YNL088W	ALD6	P54115	500 aa	Known RBP	2.95	□□□□□ -1.94
TOP2	YNL088W	YPR172W	Q06608	200 aa		2.95	□□□□□ -1.94
TOP2	YNL088W	CDC53	Q12018	815 aa	Known RBP	2.95	□□□□□ -1.94
TOP2	YNL088W	CEX1	Q12453	761 aa		2.95	□□□□□ -1.94
TOP2	YNL088W	NOP58	Q12499	511 aa	Known RBP	2.95	□□□□□ -1.94
TOP2	YNL088W	PBP2	P38151	413 aa	Known RBP RIP-Chip data	2.94	□□□□□ -1.94	not detected
TOP2	YNL088W	SPO20	Q04359	397 aa		2.94	□□□□□ -1.94
TOP2	YNL088W	YOR131C	Q12486	218 aa		2.94	□□□□□ -1.94
TOP2	YNL088W	ABZ1	P37254	787 aa	Predicted RBP	2.94	□□□□□ -1.94
TOP2	YNL088W	VPS29	P38759	282 aa		2.94	□□□□□ -1.94
TOP2	YNL088W	REF2	P42073	533 aa	Predicted RBP	2.94	□□□□□ -1.94
TOP2	YNL088W	YGR021W	P53212	290 aa		2.94	□□□□□ -1.94
TOP2	YNL088W	STI1	P15705	589 aa	Known RBP RIP-Chip data	2.94	□□□□□ -1.94	RIP-Chip
TOP2	YNL088W	RAD27	P26793	382 aa		2.94	□□□□□ -1.94
TOP2	YNL088W	YBL036C	P38197	257 aa		2.94	□□□□□ -1.94
TOP2	YNL088W	YHL050C	P38721	697 aa		2.94	□□□□□ -1.94
TOP2	YNL088W	YHR219W	P38900	624 aa		2.94	□□□□□ -1.94
TOP2	YNL088W	YNL058C	P53947	316 aa		2.94	□□□□□ -1.94
TOP2	YNL088W	VTI1	Q04338	217 aa		2.94	□□□□□ -1.94
TOP2	YNL088W	UTP14	Q04500	899 aa	Known RBP	2.94	□□□□□ -1.94
TOP2	YNL088W	STB3	Q12427	513 aa		2.94	□□□□□ -1.94
TOP2	YNL088W	YEL077C	Q3E7X8	1277 aa		2.94	□□□□□ -1.94
TOP2	YNL088W	SAC3	P46674	1301 aa		2.94	□□□□□ -1.94
TOP2	YNL088W	MRF1	P30775	413 aa	Predicted RBP	2.93	□□□□□ -1.94
TOP2	YNL088W	SEC9	P40357	651 aa		2.93	□□□□□ -1.94
TOP2	YNL088W	BUD6	P41697	788 aa		2.93	□□□□□ -1.94
TOP2	YNL088W	PIL1	P53252	339 aa	Known RBP	2.93	□□□□□ -1.94
TOP2	YNL088W	IRC3	Q06683	689 aa		2.93	□□□□□ -1.94
TOP2	YNL088W	MPH3	P0CE00	602 aa		2.93	□□□□□ -1.94
TOP2	YNL088W	NPR3	P38742	1146 aa		2.93	□□□□□ -1.94
TOP2	YNL088W	DOT6	P40059	670 aa	Known RBP	2.93	□□□□□ -1.94
TOP2	YNL088W	BNI5	P53890	448 aa	Known RBP	2.93	□□□□□ -1.94
TOP2	YNL088W	SPS1	P08458	490 aa		2.93	□□□□□ -1.94
TOP2	YNL088W	PRI1	P10363	409 aa		2.93	□□□□□ -1.94
TOP2	YNL088W	MTC2	P34246	357 aa		2.93	□□□□□ -1.94
TOP2	YNL088W	RSC2	Q06488	889 aa		2.93	□□□□□ -1.94
TOP2	YNL088W	YOR378W	Q08902	515 aa		2.93	□□□□□ -1.94
TOP2	YNL088W	WRS1	Q12109	432 aa	Known RBP	2.93	□□□□□ -1.94
TOP2	YNL088W	MPH2	P0CD99	609 aa		2.93	□□□□□ -1.94
TOP2	YNL088W	MGE1	P38523	228 aa		2.93	□□□□□ -1.94
TOP2	YNL088W	HSE1	P38753	452 aa		2.93	□□□□□ -1.94
TOP2	YNL088W	DAS1	P47005	663 aa		2.93	□□□□□ -1.94
TOP2	YNL088W	CHD1	P32657	1468 aa		2.92	□□□□□ -1.94
TOP2	YNL088W	RAD4	P14736	754 aa		2.92	□□□□□ -1.94
TOP2	YNL088W	CRP1	P38845	465 aa	Known RBP	2.92	□□□□□ -1.94
TOP2	YNL088W	YJL049W	P47048	450 aa		2.92	□□□□□ -1.94
TOP2	YNL088W	PSD2	P53037	1138 aa	Known RBP	2.92	□□□□□ -1.94

Retrieved 100 of 5,963 RNA–protein pairs in 56.5 ms