RNA–Protein interactions for RNA: YMR298W

LIP1, Transcript of Ceramide synthase subunit, yeastyeast

Gene LIP1, Length 453 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LIP1YMR298W BUB1P41695 1021 aaKnown RBP RIP-Chip data12.01□□□□□ -0.49not detected
LIP1YMR298W SAP155P43612 1002 aa12.01□□□□□ -0.49
LIP1YMR298W THI22Q06490 572 aa12.01□□□□□ -0.49
LIP1YMR298W MSB3P48566 633 aaPredicted RBP11.99□□□□□ -0.49
LIP1YMR298W FKS3Q04952 1785 aa11.98□□□□□ -0.49
LIP1YMR298W TPD3P31383 635 aa11.98□□□□□ -0.49
LIP1YMR298W YRF1-4O13559 1382 aa11.97□□□□□ -0.49
LIP1YMR298W AI2P03876 854 aa11.97□□□□□ -0.49
LIP1YMR298W DSD1P53095 428 aa11.97□□□□□ -0.49
LIP1YMR298W NAB6Q03735 1134 aaKnown RBP RIP-Chip data11.97□□□□□ -0.49not detected
LIP1YMR298W HEF3P53978 1044 aaKnown RBP11.96□□□□□ -0.49
LIP1YMR298W TCB1Q12466 1186 aa11.96□□□□□ -0.49
LIP1YMR298W URB1P34241 1764 aaKnown RBP11.96□□□□□ -0.49
LIP1YMR298W BBC1P47068 1157 aa11.95□□□□□ -0.5
LIP1YMR298W RTT109Q07794 436 aa11.94□□□□□ -0.5
LIP1YMR298W SIR4P11978 1358 aa11.93□□□□□ -0.5
LIP1YMR298W FUN12P39730 1002 aaKnown RBP11.93□□□□□ -0.5
LIP1YMR298W CTF4Q01454 927 aa11.93□□□□□ -0.5
LIP1YMR298W YNL050CP53952 270 aa11.92□□□□□ -0.5
LIP1YMR298W YLR271WQ06152 274 aa11.92□□□□□ -0.5
LIP1YMR298W NTH2P35172 780 aa11.91□□□□□ -0.5
LIP1YMR298W XKS1P42826 600 aa11.91□□□□□ -0.5
LIP1YMR298W RSF2P46974 1380 aa11.91□□□□□ -0.5
LIP1YMR298W BUD31P25337 157 aaPredicted RBP11.9□□□□□ -0.5
LIP1YMR298W HSP104P31539 908 aaKnown RBP11.9□□□□□ -0.5
LIP1YMR298W ENT1Q12518 454 aa11.9□□□□□ -0.5
LIP1YMR298W RAD2P07276 1031 aa11.89□□□□□ -0.51
LIP1YMR298W FPR3P38911 411 aaKnown RBP11.89□□□□□ -0.51
LIP1YMR298W MAM1P40065 302 aa11.89□□□□□ -0.51
LIP1YMR298W AOS1Q06624 347 aa11.89□□□□□ -0.51
LIP1YMR298W MAK21Q12176 1025 aaKnown RBP11.88□□□□□ -0.51
LIP1YMR298W RCR1P38212 213 aa11.87□□□□□ -0.51
LIP1YMR298W BUD27P43573 796 aaKnown RBP RIP-Chip data11.87□□□□□ -0.51not detected
LIP1YMR298W ZDS1P50111 915 aaKnown RBP11.87□□□□□ -0.51
LIP1YMR298W GYP7P48365 746 aa11.86□□□□□ -0.51
LIP1YMR298W YIL092WP40497 633 aa11.85□□□□□ -0.51
LIP1YMR298W ENV9Q08651 330 aa11.85□□□□□ -0.51
LIP1YMR298W YFR016CP43597 1233 aaKnown RBP11.84□□□□□ -0.51
LIP1YMR298W EDE1P34216 1381 aa11.83□□□□□ -0.52
LIP1YMR298W RRT14P40470 206 aa11.83□□□□□ -0.52
LIP1YMR298W SSP1P38871 571 aa11.82□□□□□ -0.52
LIP1YMR298W IES2P40154 320 aa11.82□□□□□ -0.52
LIP1YMR298W APP1P53933 587 aa11.82□□□□□ -0.52
LIP1YMR298W DAL5P15365 543 aa11.81□□□□□ -0.52
LIP1YMR298W UGA3P26370 528 aa11.81□□□□□ -0.52
LIP1YMR298W MEC3Q02574 474 aa11.81□□□□□ -0.52
LIP1YMR298W NSE3Q05541 303 aa11.8□□□□□ -0.52
LIP1YMR298W YRF1-3P0CX14 1859 aa11.79□□□□□ -0.52
LIP1YMR298W YRF1-7P0CX15 1859 aa11.79□□□□□ -0.52
LIP1YMR298W YRF1-6P53819 1859 aa11.79□□□□□ -0.52
LIP1YMR298W KCC4P25389 1037 aa11.79□□□□□ -0.52
LIP1YMR298W INP54Q08227 384 aaKnown RBP11.79□□□□□ -0.52
LIP1YMR298W NUP145P49687 1317 aa11.79□□□□□ -0.52
LIP1YMR298W BMS1Q08965 1183 aaKnown RBP11.78□□□□□ -0.52
LIP1YMR298W SRT1Q03175 343 aa11.77□□□□□ -0.53
LIP1YMR298W IMH1Q06704 911 aaKnown RBP11.77□□□□□ -0.53
LIP1YMR298W LYS2P07702 1392 aa11.77□□□□□ -0.53
LIP1YMR298W YKL133CP36066 463 aa11.76□□□□□ -0.53
LIP1YMR298W COQ4O13525 335 aa11.75□□□□□ -0.53
LIP1YMR298W YBR287WP38355 427 aa11.75□□□□□ -0.53
LIP1YMR298W POL32P47110 350 aa11.74□□□□□ -0.53
LIP1YMR298W ADE16P54113 591 aaKnown RBP11.74□□□□□ -0.53
LIP1YMR298W ROM2P51862 1356 aaKnown RBP11.74□□□□□ -0.53
LIP1YMR298W ARP8Q12386 881 aaKnown RBP RIP-Chip data11.72□□□□□ -0.53not detected
LIP1YMR298W OSM1P21375 501 aaKnown RBP11.71□□□□□ -0.53
LIP1YMR298W YPP1P46951 817 aa11.71□□□□□ -0.53
LIP1YMR298W ATG13Q06628 738 aa11.7□□□□□ -0.54
LIP1YMR298W YOL057WQ08225 711 aa11.7□□□□□ -0.54
LIP1YMR298W FRK1Q03002 865 aaPredicted RBP11.69□□□□□ -0.54
LIP1YMR298W PUF6Q04373 656 aaKnown RBP11.69□□□□□ -0.54
LIP1YMR298W TRP5P00931 707 aaKnown RBP11.68□□□□□ -0.54
LIP1YMR298W RAD4P14736 754 aa11.67□□□□□ -0.54
LIP1YMR298W RPC31P17890 251 aa11.67□□□□□ -0.54
LIP1YMR298W ALE1Q08548 619 aa11.67□□□□□ -0.54
LIP1YMR298W UBP9P39967 754 aa11.66□□□□□ -0.54
LIP1YMR298W YBP2P53169 641 aa11.66□□□□□ -0.54
LIP1YMR298W CSI1Q04368 295 aa11.66□□□□□ -0.54
LIP1YMR298W RPS19AP07280 144 aaKnown RBP11.65□□□□□ -0.54
LIP1YMR298W RPS19BP07281 144 aaPredicted RBP11.65□□□□□ -0.54
LIP1YMR298W DOT5P40553 215 aa11.64□□□□□ -0.55
LIP1YMR298W RMT2Q03305 412 aa11.64□□□□□ -0.55
LIP1YMR298W NOP8Q08287 484 aaPredicted RBP11.64□□□□□ -0.55
LIP1YMR298W YNG2P38806 282 aaKnown RBP11.63□□□□□ -0.55
LIP1YMR298W MRP7P12687 371 aa11.62□□□□□ -0.55
LIP1YMR298W FOX2Q02207 900 aaKnown RBP11.62□□□□□ -0.55
LIP1YMR298W YDR306CQ06640 478 aa11.62□□□□□ -0.55
LIP1YMR298W COBP00163 385 aa11.61□□□□□ -0.55
LIP1YMR298W DNM1P54861 757 aa11.61□□□□□ -0.55
LIP1YMR298W GRX1P25373 110 aaKnown RBP11.59□□□□□ -0.55
LIP1YMR298W RAD24P32641 659 aa11.59□□□□□ -0.55
LIP1YMR298W SPO1P53541 631 aa11.59□□□□□ -0.55
LIP1YMR298W ECM16Q04217 1267 aaKnown RBP11.59□□□□□ -0.55
LIP1YMR298W YOR238WQ08634 303 aa11.59□□□□□ -0.55
LIP1YMR298W NOP53Q12080 455 aaKnown RBP11.59□□□□□ -0.55
LIP1YMR298W YKR075CP36155 307 aa11.58□□□□□ -0.56
LIP1YMR298W CST6P40535 587 aa11.58□□□□□ -0.56
LIP1YMR298W ZDS2P54786 942 aa11.58□□□□□ -0.56
LIP1YMR298W LAM6Q08001 693 aa11.58□□□□□ -0.56
LIP1YMR298W SSP2Q08646 371 aa11.58□□□□□ -0.56
LIP1YMR298W MRM1P25270 412 aa11.57□□□□□ -0.56
Retrieved 100 of 5,963 RNA–protein pairs in 16.1 ms