RNA–Protein interactions for RNA: YMR293C

HER2, Transcript of Subunit of the trimeric GatFAB AmidoTransferase(AdT) complex, yeastyeast

Gene HER2, Length 1,395 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
HER2YMR293C FRA1Q07825 749 aa8.69□□□□□ -1.02
HER2YMR293C SSA1P10591 642 aaKnown RBP8.68□□□□□ -1.02
HER2YMR293C RRD1P40454 393 aaKnown RBP8.67□□□□□ -1.02
HER2YMR293C GUT2P32191 649 aa8.66□□□□□ -1.02
HER2YMR293C VRP1P37370 817 aa8.66□□□□□ -1.02
HER2YMR293C MRX12P47084 519 aa8.66□□□□□ -1.02
HER2YMR293C SDH2P21801 266 aa8.65□□□□□ -1.02
HER2YMR293C VAC17P25591 423 aa8.65□□□□□ -1.02
HER2YMR293C EMP47P43555 445 aa8.65□□□□□ -1.02
HER2YMR293C ISF1P32488 338 aa8.64□□□□□ -1.03
HER2YMR293C STE20Q03497 939 aaKnown RBP8.64□□□□□ -1.03
HER2YMR293C NOB1Q08444 459 aaKnown RBP8.64□□□□□ -1.03
HER2YMR293C GEF1P37020 779 aa8.63□□□□□ -1.03
HER2YMR293C APL6P46682 809 aa8.63□□□□□ -1.03
HER2YMR293C PUP1P25043 261 aa8.62□□□□□ -1.03
HER2YMR293C MRF1P30775 413 aaPredicted RBP8.62□□□□□ -1.03
HER2YMR293C TGL4P36165 910 aa8.61□□□□□ -1.03
HER2YMR293C UTP13Q05946 817 aaKnown RBP8.6□□□□□ -1.03
HER2YMR293C BCK2P33306 851 aa8.59□□□□□ -1.03
HER2YMR293C ATG3P40344 310 aa8.58□□□□□ -1.04
HER2YMR293C ENV9Q08651 330 aa8.57□□□□□ -1.04
HER2YMR293C YML083CQ04526 418 aa8.56□□□□□ -1.04
HER2YMR293C BDP1P46678 594 aa8.55□□□□□ -1.04
HER2YMR293C CST6P40535 587 aa8.54□□□□□ -1.04
HER2YMR293C XDJ1P39102 459 aa8.53□□□□□ -1.04
HER2YMR293C GAL2P13181 574 aa8.52□□□□□ -1.05
HER2YMR293C SOH1P38633 127 aa8.52□□□□□ -1.05
HER2YMR293C IXR1P33417 597 aa8.51□□□□□ -1.05
HER2YMR293C KTR7P40504 517 aa8.51□□□□□ -1.05
HER2YMR293C PUS5Q06244 254 aa8.51□□□□□ -1.05
HER2YMR293C ITT1Q04638 464 aa8.5□□□□□ -1.05
HER2YMR293C YEL077CQ3E7X8 1277 aa8.5□□□□□ -1.05
HER2YMR293C SYH1Q02875 849 aaKnown RBP8.49□□□□□ -1.05
HER2YMR293C KIP2P28743 706 aa8.48□□□□□ -1.05
HER2YMR293C EMW1P42842 904 aaKnown RBP8.48□□□□□ -1.05
HER2YMR293C ECM23Q02710 187 aa8.48□□□□□ -1.05
HER2YMR293C FRK1Q03002 865 aaPredicted RBP8.48□□□□□ -1.05
HER2YMR293C PHO87P25360 923 aa8.48□□□□□ -1.05
HER2YMR293C HAL5P38970 855 aaKnown RBP8.48□□□□□ -1.05
HER2YMR293C RPL34AP87262 121 aaPredicted RBP8.48□□□□□ -1.05
HER2YMR293C SLX8P40072 274 aa8.46□□□□□ -1.06
HER2YMR293C AMS1P22855 1083 aa8.45□□□□□ -1.06
HER2YMR293C CDC3P32457 520 aaKnown RBP8.45□□□□□ -1.06
HER2YMR293C ISR1Q06098 443 aaKnown RBP8.45□□□□□ -1.06
HER2YMR293C ATG20Q07528 640 aa8.45□□□□□ -1.06
HER2YMR293C HAP4P14064 554 aa8.44□□□□□ -1.06
HER2YMR293C MRT4P33201 236 aaKnown RBP8.44□□□□□ -1.06
HER2YMR293C ACS2P52910 683 aaKnown RBP8.44□□□□□ -1.06
HER2YMR293C YML020WQ03722 664 aa8.44□□□□□ -1.06
HER2YMR293C NOP8Q08287 484 aaPredicted RBP8.44□□□□□ -1.06
HER2YMR293C TSC13Q99190 310 aa8.44□□□□□ -1.06
HER2YMR293C UBX7P38349 436 aa8.42□□□□□ -1.06
HER2YMR293C HED1Q03937 162 aa8.42□□□□□ -1.06
HER2YMR293C ROM1P53046 1155 aa8.41□□□□□ -1.06
HER2YMR293C APP1P53933 587 aa8.41□□□□□ -1.06
HER2YMR293C CBC2Q08920 208 aaKnown RBP RIP-Chip data8.41□□□□□ -1.06not detected
HER2YMR293C HDA3Q06623 655 aa8.4□□□□□ -1.06
HER2YMR293C GAS4Q08271 471 aa8.4□□□□□ -1.06
HER2YMR293C SPT2P06843 333 aaPredicted RBP8.39□□□□□ -1.07
HER2YMR293C YFL034WP43564 1073 aa8.39□□□□□ -1.07
HER2YMR293C MIP1P15801 1254 aa8.38□□□□□ -1.07
HER2YMR293C PDI1P17967 522 aaKnown RBP8.38□□□□□ -1.07
HER2YMR293C FBP26P32604 452 aa8.38□□□□□ -1.07
HER2YMR293C ISU1Q03020 165 aa8.38□□□□□ -1.07
HER2YMR293C CWC15Q03772 175 aaKnown RBP8.38□□□□□ -1.07
HER2YMR293C PUF6Q04373 656 aaKnown RBP8.38□□□□□ -1.07
HER2YMR293C MKS1P34072 584 aa8.37□□□□□ -1.07
HER2YMR293C YBL086CP38177 466 aa8.37□□□□□ -1.07
HER2YMR293C RAS1P01119 309 aa8.36□□□□□ -1.07
HER2YMR293C AIM9P40053 627 aaKnown RBP8.36□□□□□ -1.07
HER2YMR293C STE6P12866 1290 aa8.35□□□□□ -1.07
HER2YMR293C TPS3P38426 1054 aaKnown RBP8.35□□□□□ -1.07
HER2YMR293C CLA4P48562 842 aa8.35□□□□□ -1.07
HER2YMR293C UTR2P32623 467 aa8.33□□□□□ -1.08
HER2YMR293C NTH2P35172 780 aa8.33□□□□□ -1.08
HER2YMR293C SSF1P38789 453 aaPredicted RBP8.33□□□□□ -1.08
HER2YMR293C MET32Q12041 191 aa8.33□□□□□ -1.08
HER2YMR293C UBP1P25037 809 aa8.32□□□□□ -1.08
HER2YMR293C RTT106P40161 455 aa8.32□□□□□ -1.08
HER2YMR293C RPS6AP0CX37 236 aaKnown RBP8.31□□□□□ -1.08
HER2YMR293C RPS6BP0CX38 236 aaPredicted RBP8.31□□□□□ -1.08
HER2YMR293C VAN1P23642 535 aa8.31□□□□□ -1.08
HER2YMR293C DFG5Q05031 458 aa8.31□□□□□ -1.08
HER2YMR293C HAT1Q12341 374 aa8.31□□□□□ -1.08
HER2YMR293C SWI5P08153 709 aa8.3□□□□□ -1.08
HER2YMR293C SRS2P12954 1174 aa8.29□□□□□ -1.08
HER2YMR293C WTM2Q12206 467 aa8.29□□□□□ -1.08
HER2YMR293C CDC4P07834 779 aa8.28□□□□□ -1.08
HER2YMR293C TRS33Q99394 268 aa8.28□□□□□ -1.08
HER2YMR293C CYT1P07143 309 aa8.27□□□□□ -1.09
HER2YMR293C SUV3P32580 737 aa8.27□□□□□ -1.09
HER2YMR293C PNP1Q05788 311 aa8.27□□□□□ -1.09
HER2YMR293C BDS1Q08347 646 aa8.27□□□□□ -1.09
HER2YMR293C RPP2BP02400 110 aaKnown RBP8.26□□□□□ -1.09
HER2YMR293C DAT1P13483 248 aaKnown RBP8.26□□□□□ -1.09
HER2YMR293C NGR1P32831 672 aaKnown RBP8.26□□□□□ -1.09
HER2YMR293C TBS1P38114 1094 aa8.26□□□□□ -1.09
HER2YMR293C PUN1Q06991 263 aa8.26□□□□□ -1.09
HER2YMR293C AIR1P40507 360 aaKnown RBP8.25□□□□□ -1.09
HER2YMR293C AFT1P22149 690 aa8.24□□□□□ -1.09
Retrieved 100 of 5,963 RNA–protein pairs in 46.9 ms