RNA–Protein interactions for RNA: YMR154C

RIM13, Transcript of Calpain-like cysteine protease, yeast

Gene RIM13, Length 2,184 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RIM13	YMR154C	SSA4	P22202	642 aa	Known RBP	5.07	□□□□□ -1.6
RIM13	YMR154C	KTR7	P40504	517 aa		5.07	□□□□□ -1.6
RIM13	YMR154C	SSA1	P10591	642 aa	Known RBP	5.06	□□□□□ -1.6
RIM13	YMR154C	TEC1	P18412	486 aa		5.06	□□□□□ -1.6
RIM13	YMR154C	RRD1	P40454	393 aa	Known RBP	5.06	□□□□□ -1.6
RIM13	YMR154C	KXD1	P53158	218 aa		5.06	□□□□□ -1.6
RIM13	YMR154C	PEP12	P32854	288 aa		5.06	□□□□□ -1.6
RIM13	YMR154C	PUS5	Q06244	254 aa		5.06	□□□□□ -1.6
RIM13	YMR154C	CST6	P40535	587 aa		5.05	□□□□□ -1.6
RIM13	YMR154C	VAC17	P25591	423 aa		5.04	□□□□□ -1.6
RIM13	YMR154C	PAT1	P25644	796 aa	Known RBP	5.04	□□□□□ -1.6
RIM13	YMR154C	TGL4	P36165	910 aa		5.04	□□□□□ -1.6
RIM13	YMR154C	FRA1	Q07825	749 aa		5.04	□□□□□ -1.6
RIM13	YMR154C	GEF1	P37020	779 aa		5.04	□□□□□ -1.6
RIM13	YMR154C	BDP1	P46678	594 aa		5.04	□□□□□ -1.6
RIM13	YMR154C	APL6	P46682	809 aa		5.02	□□□□□ -1.61
RIM13	YMR154C	ECM23	Q02710	187 aa		5.02	□□□□□ -1.61
RIM13	YMR154C	FRK1	Q03002	865 aa	Predicted RBP	5.02	□□□□□ -1.61
RIM13	YMR154C	SAS4	Q04003	481 aa		5.02	□□□□□ -1.61
RIM13	YMR154C	TPD3	P31383	635 aa		5.02	□□□□□ -1.61
RIM13	YMR154C	STE20	Q03497	939 aa	Known RBP	5.02	□□□□□ -1.61
RIM13	YMR154C	GUT2	P32191	649 aa		5.01	□□□□□ -1.61
RIM13	YMR154C	HAL5	P38970	855 aa	Known RBP	5.01	□□□□□ -1.61
RIM13	YMR154C	SOH1	P38633	127 aa		5.01	□□□□□ -1.61
RIM13	YMR154C	YPP1	P46951	817 aa		5.01	□□□□□ -1.61
RIM13	YMR154C	ENV9	Q08651	330 aa		5.01	□□□□□ -1.61
RIM13	YMR154C	IXR1	P33417	597 aa		5	□□□□□ -1.61
RIM13	YMR154C	SIS2	P36024	562 aa		5	□□□□□ -1.61
RIM13	YMR154C	APP1	P53933	587 aa		4.99	□□□□□ -1.61
RIM13	YMR154C	BCK2	P33306	851 aa		4.99	□□□□□ -1.61
RIM13	YMR154C	CLA4	P48562	842 aa		4.98	□□□□□ -1.61
RIM13	YMR154C	NOP8	Q08287	484 aa	Predicted RBP	4.98	□□□□□ -1.61
RIM13	YMR154C	ISR1	Q06098	443 aa	Known RBP	4.97	□□□□□ -1.61
RIM13	YMR154C	KIP2	P28743	706 aa		4.97	□□□□□ -1.61
RIM13	YMR154C	UBX7	P38349	436 aa		4.97	□□□□□ -1.61
RIM13	YMR154C	TPS3	P38426	1054 aa	Known RBP	4.97	□□□□□ -1.61
RIM13	YMR154C	GAL2	P13181	574 aa		4.96	□□□□□ -1.62
RIM13	YMR154C	SLX8	P40072	274 aa		4.96	□□□□□ -1.62
RIM13	YMR154C	ACS2	P52910	683 aa	Known RBP	4.96	□□□□□ -1.62
RIM13	YMR154C	YML020W	Q03722	664 aa		4.96	□□□□□ -1.62
RIM13	YMR154C	MRF1	P30775	413 aa	Predicted RBP	4.95	□□□□□ -1.62
RIM13	YMR154C	RPL34A	P87262	121 aa	Predicted RBP	4.95	□□□□□ -1.62
RIM13	YMR154C	CBC2	Q08920	208 aa	Known RBP RIP-Chip data	4.95	□□□□□ -1.62	not detected
RIM13	YMR154C	RAS1	P01119	309 aa		4.94	□□□□□ -1.62
RIM13	YMR154C	MIP1	P15801	1254 aa		4.94	□□□□□ -1.62
RIM13	YMR154C	PDI1	P17967	522 aa	Known RBP	4.94	□□□□□ -1.62
RIM13	YMR154C	MRX12	P47084	519 aa		4.94	□□□□□ -1.62
RIM13	YMR154C	ROM1	P53046	1155 aa		4.94	□□□□□ -1.62
RIM13	YMR154C	ATG20	Q07528	640 aa		4.94	□□□□□ -1.62
RIM13	YMR154C	XDJ1	P39102	459 aa		4.92	□□□□□ -1.62
RIM13	YMR154C	EMW1	P42842	904 aa	Known RBP	4.92	□□□□□ -1.62
RIM13	YMR154C	SYH1	Q02875	849 aa	Known RBP	4.92	□□□□□ -1.62
RIM13	YMR154C	AIR1	P40507	360 aa	Known RBP	4.92	□□□□□ -1.62
RIM13	YMR154C	UTP13	Q05946	817 aa	Known RBP	4.92	□□□□□ -1.62
RIM13	YMR154C	HDA3	Q06623	655 aa		4.92	□□□□□ -1.62
RIM13	YMR154C	PHO87	P25360	923 aa		4.91	□□□□□ -1.62
RIM13	YMR154C	AMS1	P22855	1083 aa		4.91	□□□□□ -1.62
RIM13	YMR154C	YEL077C	Q3E7X8	1277 aa		4.91	□□□□□ -1.62
RIM13	YMR154C	AIM9	P40053	627 aa	Known RBP	4.9	□□□□□ -1.62
RIM13	YMR154C	CDC3	P32457	520 aa	Known RBP	4.89	□□□□□ -1.63
RIM13	YMR154C	MET32	Q12041	191 aa		4.89	□□□□□ -1.63
RIM13	YMR154C	TSC13	Q99190	310 aa		4.89	□□□□□ -1.63
RIM13	YMR154C	ATG3	P40344	310 aa		4.89	□□□□□ -1.63
RIM13	YMR154C	HAT1	Q12341	374 aa		4.89	□□□□□ -1.63
RIM13	YMR154C	ISU1	Q03020	165 aa		4.88	□□□□□ -1.63
RIM13	YMR154C	CWC15	Q03772	175 aa	Known RBP	4.88	□□□□□ -1.63
RIM13	YMR154C	HAP4	P14064	554 aa		4.87	□□□□□ -1.63
RIM13	YMR154C	FBP26	P32604	452 aa		4.87	□□□□□ -1.63
RIM13	YMR154C	MRT4	P33201	236 aa	Known RBP	4.87	□□□□□ -1.63
RIM13	YMR154C	MKS1	P34072	584 aa		4.87	□□□□□ -1.63
RIM13	YMR154C	YBL086C	P38177	466 aa		4.87	□□□□□ -1.63
RIM13	YMR154C	SUV3	P32580	737 aa		4.87	□□□□□ -1.63
RIM13	YMR154C	NTH2	P35172	780 aa		4.87	□□□□□ -1.63
RIM13	YMR154C	SSF1	P38789	453 aa	Predicted RBP	4.87	□□□□□ -1.63
RIM13	YMR154C	DFG5	Q05031	458 aa		4.87	□□□□□ -1.63
RIM13	YMR154C	HED1	Q03937	162 aa		4.86	□□□□□ -1.63
RIM13	YMR154C	SWI5	P08153	709 aa		4.85	□□□□□ -1.63
RIM13	YMR154C	BOL3	P39724	118 aa		4.85	□□□□□ -1.63
RIM13	YMR154C	SEN54	Q02825	467 aa	Predicted RBP	4.85	□□□□□ -1.63
RIM13	YMR154C	GAS4	Q08271	471 aa		4.85	□□□□□ -1.63
RIM13	YMR154C	RPS6A	P0CX37	236 aa	Known RBP	4.84	□□□□□ -1.63
RIM13	YMR154C	RPS6B	P0CX38	236 aa	Predicted RBP	4.84	□□□□□ -1.63
RIM13	YMR154C	UTR2	P32623	467 aa		4.84	□□□□□ -1.63
RIM13	YMR154C	STE6	P12866	1290 aa		4.84	□□□□□ -1.64
RIM13	YMR154C	PUN1	Q06991	263 aa		4.84	□□□□□ -1.64
RIM13	YMR154C	UTP7	P40055	554 aa	Known RBP	4.83	□□□□□ -1.64
RIM13	YMR154C	PUF6	Q04373	656 aa	Known RBP	4.83	□□□□□ -1.64
RIM13	YMR154C	PNP1	Q05788	311 aa		4.83	□□□□□ -1.64
RIM13	YMR154C	SPT2	P06843	333 aa	Predicted RBP	4.82	□□□□□ -1.64
RIM13	YMR154C	DAT1	P13483	248 aa	Known RBP	4.82	□□□□□ -1.64
RIM13	YMR154C	ERP5	P38819	212 aa		4.82	□□□□□ -1.64
RIM13	YMR154C	KAR5	Q04746	504 aa		4.82	□□□□□ -1.64
RIM13	YMR154C	YBL113C	Q7M4S9	792 aa		4.82	□□□□□ -1.64
RIM13	YMR154C	CYT1	P07143	309 aa		4.82	□□□□□ -1.64
RIM13	YMR154C	TRL1	P09880	827 aa	Known RBP	4.82	□□□□□ -1.64
RIM13	YMR154C	ALD4	P46367	519 aa	Known RBP	4.82	□□□□□ -1.64
RIM13	YMR154C	WTM2	Q12206	467 aa		4.82	□□□□□ -1.64
RIM13	YMR154C	DPS1	P04802	557 aa	Known RBP	4.81	□□□□□ -1.64
RIM13	YMR154C	VAN1	P23642	535 aa		4.8	□□□□□ -1.64
RIM13	YMR154C	YFL034W	P43564	1073 aa		4.8	□□□□□ -1.64

Retrieved 100 of 5,963 RNA–protein pairs in 11.2 ms