RNA–Protein interactions for RNA: YML085C

TUB1, Transcript of Alpha-tubulin, yeastyeast

Gene TUB1, Length 1,344 nt, Biotype protein coding, Subcellular localisation Cellular bud, Endoplasmic reticulum, Peroxisome .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TUB1YML085C ALD2P47771 506 aa9.01□□□□□ -0.97
TUB1YML085C ADE16P54113 591 aaKnown RBP9.01□□□□□ -0.97
TUB1YML085C FRK1Q03002 865 aaPredicted RBP9.01□□□□□ -0.97
TUB1YML085C GRX1P25373 110 aaKnown RBP9□□□□□ -0.97
TUB1YML085C YKR075CP36155 307 aa9□□□□□ -0.97
TUB1YML085C UGA2P38067 497 aa9□□□□□ -0.97
TUB1YML085C NST1P53935 1240 aa9□□□□□ -0.97
TUB1YML085C INP54Q08227 384 aaKnown RBP9□□□□□ -0.97
TUB1YML085C KCC4P25389 1037 aa8.99□□□□□ -0.97
TUB1YML085C UGA3P26370 528 aa8.99□□□□□ -0.97
TUB1YML085C MSB4Q12317 492 aa8.99□□□□□ -0.97
TUB1YML085C OSM1P21375 501 aaKnown RBP8.98□□□□□ -0.97
TUB1YML085C YBP2P53169 641 aa8.98□□□□□ -0.97
TUB1YML085C MDG1P53885 366 aa8.98□□□□□ -0.97
TUB1YML085C YNL050CP53952 270 aa8.98□□□□□ -0.97
TUB1YML085C PRD1P25375 712 aa8.97□□□□□ -0.97
TUB1YML085C NTH2P35172 780 aa8.97□□□□□ -0.97
TUB1YML085C MAM1P40065 302 aa8.97□□□□□ -0.97
TUB1YML085C NSE3Q05541 303 aa8.97□□□□□ -0.97
TUB1YML085C NUP145P49687 1317 aa8.96□□□□□ -0.97
TUB1YML085C BDF1P35817 686 aa8.96□□□□□ -0.98
TUB1YML085C NPR2P39923 615 aa8.96□□□□□ -0.98
TUB1YML085C RAD4P14736 754 aa8.95□□□□□ -0.98
TUB1YML085C RRP46P53256 223 aaPredicted RBP8.95□□□□□ -0.98
TUB1YML085C ZDS1P50111 915 aaKnown RBP8.94□□□□□ -0.98
TUB1YML085C RMT2Q03305 412 aa8.94□□□□□ -0.98
TUB1YML085C HAA1Q12753 694 aaKnown RBP8.94□□□□□ -0.98
TUB1YML085C LYS2P07702 1392 aa8.93□□□□□ -0.98
TUB1YML085C RIM15P43565 1770 aa8.93□□□□□ -0.98
TUB1YML085C YBL086CP38177 466 aa8.93□□□□□ -0.98
TUB1YML085C YDL144CQ07589 356 aa8.93□□□□□ -0.98
TUB1YML085C VPS27P40343 622 aaKnown RBP8.92□□□□□ -0.98
TUB1YML085C YRB30P53107 440 aaPredicted RBP8.92□□□□□ -0.98
TUB1YML085C ALD3P54114 506 aa8.92□□□□□ -0.98
TUB1YML085C BUG1Q12191 341 aa8.92□□□□□ -0.98
TUB1YML085C SSA2P10592 639 aaKnown RBP8.91□□□□□ -0.98
TUB1YML085C UTP22P53254 1237 aaPredicted RBP8.91□□□□□ -0.98
TUB1YML085C CDC45Q08032 650 aa8.9□□□□□ -0.98
TUB1YML085C TSR3Q12094 313 aaKnown RBP8.9□□□□□ -0.98
TUB1YML085C MPP10P47083 593 aaKnown RBP8.89□□□□□ -0.99
TUB1YML085C GYP7P48365 746 aa8.89□□□□□ -0.99
TUB1YML085C LYS4P49367 693 aaPredicted RBP8.89□□□□□ -0.99
TUB1YML085C SSP2Q08646 371 aa8.89□□□□□ -0.99
TUB1YML085C GRE2Q12068 342 aaKnown RBP8.88□□□□□ -0.99
TUB1YML085C NOP53Q12080 455 aaKnown RBP8.87□□□□□ -0.99
TUB1YML085C THI22Q06490 572 aa8.86□□□□□ -0.99
TUB1YML085C PHM7Q12252 991 aa8.86□□□□□ -0.99
TUB1YML085C ALE1Q08548 619 aa8.84□□□□□ -0.99
TUB1YML085C BMS1Q08965 1183 aaKnown RBP8.84□□□□□ -0.99
TUB1YML085C MAK21Q12176 1025 aaKnown RBP8.84□□□□□ -0.99
TUB1YML085C TPD3P31383 635 aa8.83□□□□□ -1
TUB1YML085C RRT14P40470 206 aa8.83□□□□□ -1
TUB1YML085C CTH1P47976 325 aa8.83□□□□□ -1
TUB1YML085C SAP155P43612 1002 aa8.82□□□□□ -1
TUB1YML085C RTT109Q07794 436 aa8.82□□□□□ -1
TUB1YML085C NSR1P27476 414 aaKnown RBP RIP-Chip data8.81□□□□□ -1 RIP-Chip
TUB1YML085C HEF3P53978 1044 aaKnown RBP8.81□□□□□ -1
TUB1YML085C HPC2Q01448 625 aa8.81□□□□□ -1
TUB1YML085C DIB1Q06819 143 aaPredicted RBP8.81□□□□□ -1
TUB1YML085C TUM1Q08686 304 aaKnown RBP8.81□□□□□ -1
TUB1YML085C TEA1P47988 759 aa8.8□□□□□ -1
TUB1YML085C DNM1P54861 757 aa8.8□□□□□ -1
TUB1YML085C YOL057WQ08225 711 aa8.8□□□□□ -1
TUB1YML085C COQ4O13525 335 aa8.8□□□□□ -1
TUB1YML085C RAT1Q02792 1006 aaKnown RBP8.8□□□□□ -1
TUB1YML085C NYV1Q12255 253 aa8.8□□□□□ -1
TUB1YML085C SER1P33330 395 aaKnown RBP8.79□□□□□ -1
TUB1YML085C TOS1P38288 455 aa8.79□□□□□ -1
TUB1YML085C BUD27P43573 796 aaKnown RBP RIP-Chip data8.79□□□□□ -1not detected
TUB1YML085C LPD1P09624 499 aaKnown RBP8.78□□□□□ -1
TUB1YML085C SUI2P20459 304 aaKnown RBP8.78□□□□□ -1
TUB1YML085C SRT1Q03175 343 aa8.77□□□□□ -1.01
TUB1YML085C CST6P40535 587 aa8.76□□□□□ -1.01
TUB1YML085C NAB6Q03735 1134 aaKnown RBP RIP-Chip data8.76□□□□□ -1.01not detected
TUB1YML085C NOP8Q08287 484 aaPredicted RBP8.76□□□□□ -1.01
TUB1YML085C SUP35P05453 685 aaKnown RBP8.75□□□□□ -1.01
TUB1YML085C PRS1P32895 427 aaKnown RBP8.75□□□□□ -1.01
TUB1YML085C YBR287WP38355 427 aa8.75□□□□□ -1.01
TUB1YML085C YLR271WQ06152 274 aa8.75□□□□□ -1.01
TUB1YML085C DIP2Q12220 943 aaPredicted RBP8.75□□□□□ -1.01
TUB1YML085C RVB2Q12464 471 aaKnown RBP8.75□□□□□ -1.01
TUB1YML085C SSK22P25390 1331 aaPredicted RBP8.74□□□□□ -1.01
TUB1YML085C RAD2P07276 1031 aa8.74□□□□□ -1.01
TUB1YML085C YKL222CP35995 705 aa8.74□□□□□ -1.01
TUB1YML085C YGL082WP53155 381 aa8.74□□□□□ -1.01
TUB1YML085C UTP10P42945 1769 aaKnown RBP8.74□□□□□ -1.01
TUB1YML085C RPS9BP05755 195 aaKnown RBP8.73□□□□□ -1.01
TUB1YML085C MRP7P12687 371 aa8.73□□□□□ -1.01
TUB1YML085C YJR008WP47085 338 aa8.73□□□□□ -1.01
TUB1YML085C VPS64Q03944 604 aa8.73□□□□□ -1.01
TUB1YML085C HAT1Q12341 374 aa8.73□□□□□ -1.01
TUB1YML085C YPP1P46951 817 aa8.72□□□□□ -1.01
TUB1YML085C PKH1Q03407 766 aa8.72□□□□□ -1.01
TUB1YML085C YDR306CQ06640 478 aa8.72□□□□□ -1.01
TUB1YML085C CTT1P06115 562 aa8.71□□□□□ -1.02
TUB1YML085C PFF1P38244 976 aa8.71□□□□□ -1.02
TUB1YML085C MSN5P52918 1224 aa8.71□□□□□ -1.02
TUB1YML085C IRC3Q06683 689 aa8.71□□□□□ -1.02
TUB1YML085C YPR204WQ08995 1032 aa8.71□□□□□ -1.02
TUB1YML085C ARG8P18544 423 aa8.7□□□□□ -1.02
Retrieved 100 of 5,963 RNA–protein pairs in 15.6 ms