RNA–Protein interactions for RNA: YLR388W

RPS29A, Transcript of Protein component of the small (40S) ribosomal subunit, yeast

Gene RPS29A, Length 171 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RPS29A	YLR388W	IES1	P43579	692 aa		3.02	□□□□□ -1.93
RPS29A	YLR388W	CSN12	P47130	423 aa		3.02	□□□□□ -1.93
RPS29A	YLR388W	POB3	Q04636	552 aa	Known RBP	3.02	□□□□□ -1.93
RPS29A	YLR388W	NSE3	Q05541	303 aa		3.02	□□□□□ -1.93
RPS29A	YLR388W	RRP15	Q06511	250 aa	Predicted RBP	3.02	□□□□□ -1.93
RPS29A	YLR388W	NOP53	Q12080	455 aa	Known RBP	3.02	□□□□□ -1.93
RPS29A	YLR388W	OPI1	P21957	404 aa		3.01	□□□□□ -1.93
RPS29A	YLR388W	TRX2	P22803	104 aa	Known RBP	3.01	□□□□□ -1.93
RPS29A	YLR388W	SSD1	P24276	1250 aa	Known RBP RIP-Chip data	3.01	□□□□□ -1.93	not detected
RPS29A	YLR388W	SEC6	P32844	805 aa		3.01	□□□□□ -1.93
RPS29A	YLR388W	SEC8	P32855	1065 aa		3.01	□□□□□ -1.93
RPS29A	YLR388W	IOC3	P43596	787 aa		3.01	□□□□□ -1.93
RPS29A	YLR388W	UBP3	Q01477	912 aa	Known RBP RIP-Chip data	3.01	□□□□□ -1.93	not detected
RPS29A	YLR388W	TLG1	Q03322	224 aa		3.01	□□□□□ -1.93
RPS29A	YLR388W	SRC1	Q03707	834 aa		3.01	□□□□□ -1.93
RPS29A	YLR388W	PML39	Q03760	334 aa		3.01	□□□□□ -1.93
RPS29A	YLR388W	MSC6	Q08818	692 aa	Known RBP	3.01	□□□□□ -1.93
RPS29A	YLR388W	PSH1	Q12161	406 aa		3.01	□□□□□ -1.93
RPS29A	YLR388W	ERP4	Q12450	207 aa		3.01	□□□□□ -1.93
RPS29A	YLR388W	CAB3	P36076	571 aa		3	□□□□□ -1.93
RPS29A	YLR388W	FUI1	P38196	639 aa		3	□□□□□ -1.93
RPS29A	YLR388W	YBL036C	P38197	257 aa		3	□□□□□ -1.93
RPS29A	YLR388W	ERP5	P38819	212 aa		3	□□□□□ -1.93
RPS29A	YLR388W	THI12	P42883	340 aa		3	□□□□□ -1.93
RPS29A	YLR388W	THI5	P43534	340 aa		3	□□□□□ -1.93
RPS29A	YLR388W	THI11	P47183	340 aa		3	□□□□□ -1.93
RPS29A	YLR388W	THI13	Q07748	340 aa		3	□□□□□ -1.93
RPS29A	YLR388W	PSK2	Q08217	1101 aa		3	□□□□□ -1.93
RPS29A	YLR388W	YGR161W-C	Q3E744	92 aa		3	□□□□□ -1.93
RPS29A	YLR388W	THS1	P04801	734 aa	Known RBP	2.99	□□□□□ -1.93
RPS29A	YLR388W	PWP2	P25635	923 aa	Known RBP	2.99	□□□□□ -1.93
RPS29A	YLR388W	RPN12	P32496	274 aa		2.99	□□□□□ -1.93
RPS29A	YLR388W	YHL050C	P38721	697 aa		2.99	□□□□□ -1.93
RPS29A	YLR388W	YHR219W	P38900	624 aa		2.99	□□□□□ -1.93
RPS29A	YLR388W	HOS4	P40480	1083 aa		2.99	□□□□□ -1.93
RPS29A	YLR388W	YJR142W	P47173	342 aa		2.99	□□□□□ -1.93
RPS29A	YLR388W	ARH1	P48360	493 aa		2.99	□□□□□ -1.93
RPS29A	YLR388W	ESF2	P53743	316 aa	Known RBP	2.99	□□□□□ -1.93
RPS29A	YLR388W	YNL108C	P53929	270 aa		2.99	□□□□□ -1.93
RPS29A	YLR388W	ALD3	P54114	506 aa		2.99	□□□□□ -1.93
RPS29A	YLR388W	CEF1	Q03654	590 aa	Predicted RBP	2.99	□□□□□ -1.93
RPS29A	YLR388W	STB3	Q12427	513 aa		2.99	□□□□□ -1.93
RPS29A	YLR388W	NKP1	Q12493	238 aa		2.99	□□□□□ -1.93
RPS29A	YLR388W	YEL077C	Q3E7X8	1277 aa		2.99	□□□□□ -1.93
RPS29A	YLR388W	MAK11	P20484	414 aa	Known RBP	2.98	□□□□□ -1.93
RPS29A	YLR388W	NFU1	P32860	256 aa		2.98	□□□□□ -1.93
RPS29A	YLR388W	MAL31	P38156	614 aa		2.98	□□□□□ -1.93
RPS29A	YLR388W	MNN1	P39106	762 aa		2.98	□□□□□ -1.93
RPS29A	YLR388W	YEN1	P40028	759 aa		2.98	□□□□□ -1.93
RPS29A	YLR388W	ALD6	P54115	500 aa	Known RBP	2.98	□□□□□ -1.93
RPS29A	YLR388W	SVL3	Q03088	825 aa	Known RBP	2.98	□□□□□ -1.93
RPS29A	YLR388W	WHI5	Q12416	295 aa		2.98	□□□□□ -1.93
RPS29A	YLR388W	SNU66	Q12420	587 aa	Predicted RBP	2.98	□□□□□ -1.93
RPS29A	YLR388W	TY4B-P	A0A0B7P3V8	1104 aa		2.97	□□□□□ -1.93
RPS29A	YLR388W	COX6	P00427	148 aa		2.97	□□□□□ -1.93
RPS29A	YLR388W	KTR1	P27810	393 aa	Known RBP	2.97	□□□□□ -1.93
RPS29A	YLR388W	DEF1	P35732	738 aa	Known RBP	2.97	□□□□□ -1.93
RPS29A	YLR388W	VPS24	P36095	224 aa	Known RBP	2.97	□□□□□ -1.93
RPS29A	YLR388W	MET1	P36150	593 aa		2.97	□□□□□ -1.93
RPS29A	YLR388W	UBP14	P38237	781 aa	Known RBP	2.97	□□□□□ -1.93
RPS29A	YLR388W	RTT106	P40161	455 aa		2.97	□□□□□ -1.93
RPS29A	YLR388W	MDM1	Q01846	1127 aa		2.97	□□□□□ -1.93
RPS29A	YLR388W	MTC5	Q03897	1148 aa		2.97	□□□□□ -1.93
RPS29A	YLR388W	CDC53	Q12018	815 aa	Known RBP	2.97	□□□□□ -1.93
RPS29A	YLR388W	TY4A-H	Q6Q5P6	413 aa		2.97	□□□□□ -1.93
RPS29A	YLR388W	MET6	P05694	767 aa	Known RBP	2.96	□□□□□ -1.94
RPS29A	YLR388W	COQ8	P27697	501 aa		2.96	□□□□□ -1.94
RPS29A	YLR388W	SPT23	P35210	1082 aa		2.96	□□□□□ -1.94
RPS29A	YLR388W	TGL4	P36165	910 aa		2.96	□□□□□ -1.94
RPS29A	YLR388W	GRS1	P38088	690 aa	Known RBP	2.96	□□□□□ -1.94
RPS29A	YLR388W	GLO3	P38682	493 aa	Known RBP	2.96	□□□□□ -1.94
RPS29A	YLR388W	NMD3	P38861	518 aa	Known RBP	2.96	□□□□□ -1.94
RPS29A	YLR388W	UBP12	P39538	1254 aa		2.96	□□□□□ -1.94
RPS29A	YLR388W	BDP1	P46678	594 aa		2.96	□□□□□ -1.94
RPS29A	YLR388W	YGL081W	P53156	320 aa		2.96	□□□□□ -1.94
RPS29A	YLR388W	RPN4	Q03465	531 aa		2.96	□□□□□ -1.94
RPS29A	YLR388W	YLR326W	Q06170	240 aa	Known RBP	2.96	□□□□□ -1.94
RPS29A	YLR388W	TYW1	Q08960	810 aa	Known RBP	2.96	□□□□□ -1.94
RPS29A	YLR388W	ENO1	P00924	437 aa	Known RBP	2.95	□□□□□ -1.94
RPS29A	YLR388W	STI1	P15705	589 aa	Known RBP RIP-Chip data	2.95	□□□□□ -1.94	not detected
RPS29A	YLR388W	YDJ1	P25491	409 aa	Known RBP	2.95	□□□□□ -1.94
RPS29A	YLR388W	SWI3	P32591	825 aa		2.95	□□□□□ -1.94
RPS29A	YLR388W	TFC3	P34111	1160 aa		2.95	□□□□□ -1.94
RPS29A	YLR388W	PBP2	P38151	413 aa	Known RBP RIP-Chip data	2.95	□□□□□ -1.94	not detected
RPS29A	YLR388W	MGE1	P38523	228 aa		2.95	□□□□□ -1.94
RPS29A	YLR388W	PPX1	P38698	397 aa		2.95	□□□□□ -1.94
RPS29A	YLR388W	MSH4	P40965	878 aa	Predicted RBP	2.95	□□□□□ -1.94
RPS29A	YLR388W	BUD6	P41697	788 aa		2.95	□□□□□ -1.94
RPS29A	YLR388W	ITC1	P53125	1264 aa		2.95	□□□□□ -1.94
RPS29A	YLR388W	FOL1	P53848	824 aa		2.95	□□□□□ -1.94
RPS29A	YLR388W	SYH1	Q02875	849 aa	Known RBP	2.95	□□□□□ -1.94
RPS29A	YLR388W	WRS1	Q12109	432 aa	Known RBP	2.95	□□□□□ -1.94
RPS29A	YLR388W	MNL2	Q12205	849 aa		2.95	□□□□□ -1.94
RPS29A	YLR388W	YOR131C	Q12486	218 aa		2.95	□□□□□ -1.94
RPS29A	YLR388W	TY1B-A	O13527	1196 aa	Known RBP	2.94	□□□□□ -1.94
RPS29A	YLR388W	TRL1	P09880	827 aa	Known RBP	2.94	□□□□□ -1.94
RPS29A	YLR388W	RAD27	P26793	382 aa		2.94	□□□□□ -1.94
RPS29A	YLR388W	DPB3	P27344	201 aa		2.94	□□□□□ -1.94
RPS29A	YLR388W	MUM2	P38236	366 aa		2.94	□□□□□ -1.94
RPS29A	YLR388W	ENP1	P38333	483 aa	Known RBP	2.94	□□□□□ -1.94

Retrieved 100 of 5,963 RNA–protein pairs in 31.2 ms