RNA–Protein interactions for RNA: YLR268W

SEC22, Transcript of R-SNARE protein, yeastyeast

Gene SEC22, Length 645 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SEC22YLR268W YBL086CP38177 466 aa6.5□□□□□ -1.37
SEC22YLR268W YIR007WP40566 764 aa6.5□□□□□ -1.37
SEC22YLR268W YGR035CP53222 116 aa6.5□□□□□ -1.37
SEC22YLR268W YNR021WP53723 404 aaKnown RBP6.5□□□□□ -1.37
SEC22YLR268W ESS1P22696 170 aa6.49□□□□□ -1.37
SEC22YLR268W AAD14P42884 376 aa6.49□□□□□ -1.37
SEC22YLR268W RSC30P38781 883 aa6.48□□□□□ -1.37
SEC22YLR268W LSC2P53312 427 aa6.48□□□□□ -1.37
SEC22YLR268W MTC5Q03897 1148 aa6.47□□□□□ -1.37
SEC22YLR268W YJU3P28321 313 aa6.46□□□□□ -1.38
SEC22YLR268W UBP2Q01476 1272 aa6.46□□□□□ -1.38
SEC22YLR268W HPF1Q05164 967 aa6.46□□□□□ -1.38
SEC22YLR268W EMW1P42842 904 aaKnown RBP6.45□□□□□ -1.38
SEC22YLR268W YJR098CP47139 656 aa6.43□□□□□ -1.38
SEC22YLR268W GLC3P32775 704 aa6.42□□□□□ -1.38
SEC22YLR268W AIM7Q12156 149 aa6.41□□□□□ -1.38
SEC22YLR268W KTR1P27810 393 aaKnown RBP6.39□□□□□ -1.39
SEC22YLR268W APP1P53933 587 aa6.39□□□□□ -1.39
SEC22YLR268W PKH3Q03306 898 aaPredicted RBP6.39□□□□□ -1.39
SEC22YLR268W YPR204WQ08995 1032 aa6.39□□□□□ -1.39
SEC22YLR268W TCB1Q12466 1186 aa6.39□□□□□ -1.39
SEC22YLR268W DLD1P32891 587 aa6.37□□□□□ -1.39
SEC22YLR268W OSH7P38755 437 aa6.37□□□□□ -1.39
SEC22YLR268W FIG4P42837 879 aa6.37□□□□□ -1.39
SEC22YLR268W ROG3P43602 733 aa6.37□□□□□ -1.39
SEC22YLR268W TY1A-MR1Q04215 440 aa6.37□□□□□ -1.39
SEC22YLR268W DPH6Q12429 685 aa6.37□□□□□ -1.39
SEC22YLR268W ARG8P18544 423 aa6.36□□□□□ -1.39
SEC22YLR268W MKS1P34072 584 aa6.35□□□□□ -1.39
SEC22YLR268W ITT1Q04638 464 aa6.35□□□□□ -1.39
SEC22YLR268W CSN12P47130 423 aa6.34□□□□□ -1.39
SEC22YLR268W CCP1P00431 361 aa6.33□□□□□ -1.4
SEC22YLR268W TEC1P18412 486 aa6.32□□□□□ -1.4
SEC22YLR268W LYS5P50113 272 aa6.32□□□□□ -1.4
SEC22YLR268W DFG5Q05031 458 aa6.32□□□□□ -1.4
SEC22YLR268W FBP26P32604 452 aa6.31□□□□□ -1.4
SEC22YLR268W ICP55P40051 511 aa6.31□□□□□ -1.4
SEC22YLR268W YPR084WQ06821 456 aa6.31□□□□□ -1.4
SEC22YLR268W VTC4P47075 721 aa6.3□□□□□ -1.4
SEC22YLR268W BDS1Q08347 646 aa6.3□□□□□ -1.4
SEC22YLR268W RAD59Q12223 238 aa6.3□□□□□ -1.4
SEC22YLR268W STE6P12866 1290 aa6.29□□□□□ -1.4
SEC22YLR268W JJJ3P47138 172 aa6.29□□□□□ -1.4
SEC22YLR268W PUS1Q12211 544 aaKnown RBP6.28□□□□□ -1.4
SEC22YLR268W CDC19P00549 500 aaKnown RBP6.27□□□□□ -1.41
SEC22YLR268W PHM7Q12252 991 aa6.27□□□□□ -1.41
SEC22YLR268W NAM8Q00539 523 aaKnown RBP6.25□□□□□ -1.41
SEC22YLR268W MAK16P10962 306 aaPredicted RBP6.24□□□□□ -1.41
SEC22YLR268W GUT2P32191 649 aa6.24□□□□□ -1.41
SEC22YLR268W SSA2P10592 639 aaKnown RBP6.23□□□□□ -1.41
SEC22YLR268W NAF1P53919 492 aaKnown RBP6.23□□□□□ -1.41
SEC22YLR268W RPP2BP02400 110 aaKnown RBP6.22□□□□□ -1.41
SEC22YLR268W DAL1P32375 460 aa6.22□□□□□ -1.41
SEC22YLR268W ISU1Q03020 165 aa6.22□□□□□ -1.41
SEC22YLR268W ATG20Q07528 640 aa6.21□□□□□ -1.42
SEC22YLR268W LSB3P43603 459 aaKnown RBP6.2□□□□□ -1.42
SEC22YLR268W FRA1Q07825 749 aa6.2□□□□□ -1.42
SEC22YLR268W CUZ1P53899 274 aa6.18□□□□□ -1.42
SEC22YLR268W MDJ1P35191 511 aa6.17□□□□□ -1.42
SEC22YLR268W DLD3P39976 496 aaKnown RBP6.17□□□□□ -1.42
SEC22YLR268W NSG2P53898 299 aa6.17□□□□□ -1.42
SEC22YLR268W STE20Q03497 939 aaKnown RBP6.17□□□□□ -1.42
SEC22YLR268W AI1P03875 834 aa6.15□□□□□ -1.42
SEC22YLR268W CEM1P39525 442 aa6.15□□□□□ -1.42
SEC22YLR268W MRX12P47084 519 aa6.15□□□□□ -1.42
SEC22YLR268W UBP15P50101 1230 aa6.15□□□□□ -1.42
SEC22YLR268W YFL066CP43538 392 aa6.14□□□□□ -1.43
SEC22YLR268W MSN5P52918 1224 aa6.14□□□□□ -1.43
SEC22YLR268W KIN1P13185 1064 aa6.13□□□□□ -1.43
SEC22YLR268W CSE4P36012 229 aa6.12□□□□□ -1.43
SEC22YLR268W APL6P46682 809 aa6.12□□□□□ -1.43
SEC22YLR268W SPT2P06843 333 aaPredicted RBP6.11□□□□□ -1.43
SEC22YLR268W DIT1P21623 536 aa6.11□□□□□ -1.43
SEC22YLR268W SYT1Q06836 1226 aa6.11□□□□□ -1.43
SEC22YLR268W THI72Q08579 599 aa6.11□□□□□ -1.43
SEC22YLR268W YDR461C-AQ2V2P7 80 aa6.11□□□□□ -1.43
SEC22YLR268W SPT5P27692 1063 aaKnown RBP6.1□□□□□ -1.43
SEC22YLR268W SLA1P32790 1244 aa6.1□□□□□ -1.43
SEC22YLR268W YMR265CQ03508 461 aaKnown RBP6.1□□□□□ -1.43
SEC22YLR268W WTM2Q12206 467 aa6.1□□□□□ -1.43
SEC22YLR268W SSN3P39073 555 aa6.09□□□□□ -1.43
SEC22YLR268W CCT8P47079 568 aaKnown RBP6.09□□□□□ -1.43
SEC22YLR268W ADE12P80210 433 aaKnown RBP6.09□□□□□ -1.43
SEC22YLR268W UTR2P32623 467 aa6.07□□□□□ -1.44
SEC22YLR268W ISR1Q06098 443 aaKnown RBP6.07□□□□□ -1.44
SEC22YLR268W YPR053CQ6Q5F3 151 aa6.07□□□□□ -1.44
SEC22YLR268W AHP1P38013 176 aaKnown RBP6.06□□□□□ -1.44
SEC22YLR268W MCM16Q12262 181 aa6.06□□□□□ -1.44
SEC22YLR268W TY1A-DR3Q12441 440 aa6.06□□□□□ -1.44
SEC22YLR268W EMP47P43555 445 aa6.05□□□□□ -1.44
SEC22YLR268W KRE33P53914 1056 aaKnown RBP6.05□□□□□ -1.44
SEC22YLR268W DAT1P13483 248 aaKnown RBP6.04□□□□□ -1.44
SEC22YLR268W LEU3P08638 886 aa6.03□□□□□ -1.44
SEC22YLR268W TBS1P38114 1094 aa6.03□□□□□ -1.44
SEC22YLR268W SKN7P38889 622 aa6.03□□□□□ -1.44
SEC22YLR268W UTP13Q05946 817 aaKnown RBP6.03□□□□□ -1.44
SEC22YLR268W GUA1P38625 525 aaKnown RBP6.02□□□□□ -1.45
SEC22YLR268W ISF1P32488 338 aa6.01□□□□□ -1.45
SEC22YLR268W SUM1P46676 1062 aa6.01□□□□□ -1.45
SEC22YLR268W HPC2Q01448 625 aa6.01□□□□□ -1.45
Retrieved 100 of 5,963 RNA–protein pairs in 15.6 ms