RNA–Protein interactions for RNA: YLR227W-B

YLR227W-B, Transcript of Retrotransposon TYA Gag and TYB Pol genes, yeastyeast

Gene YLR227W-B, Length 5,268 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YLR227W-BYLR227W-B TPS3P38426 1054 aaKnown RBP4.46□□□□□ -1.7
YLR227W-BYLR227W-B YJR107WP47145 328 aa4.46□□□□□ -1.7
YLR227W-BYLR227W-B LIF1P53150 421 aa4.46□□□□□ -1.7
YLR227W-BYLR227W-B YLR419WQ06698 1435 aaKnown RBP4.46□□□□□ -1.7
YLR227W-BYLR227W-B SEC20P28791 383 aa4.46□□□□□ -1.7
YLR227W-BYLR227W-B RBA50Q04418 439 aa4.46□□□□□ -1.7
YLR227W-BYLR227W-B SPT5P27692 1063 aaKnown RBP4.45□□□□□ -1.7
YLR227W-BYLR227W-B LPD1P09624 499 aaKnown RBP4.45□□□□□ -1.7
YLR227W-BYLR227W-B YFR016CP43597 1233 aaKnown RBP4.45□□□□□ -1.7
YLR227W-BYLR227W-B YBL036CP38197 257 aa4.44□□□□□ -1.7
YLR227W-BYLR227W-B MMF1P40185 145 aaKnown RBP4.44□□□□□ -1.7
YLR227W-BYLR227W-B ESF1Q06344 628 aaKnown RBP4.44□□□□□ -1.7
YLR227W-BYLR227W-B RRG1Q12167 365 aaPredicted RBP4.44□□□□□ -1.7
YLR227W-BYLR227W-B NOP8Q08287 484 aaPredicted RBP4.44□□□□□ -1.7
YLR227W-BYLR227W-B SHC1P39000 512 aa4.44□□□□□ -1.7
YLR227W-BYLR227W-B RSF2P46974 1380 aa4.44□□□□□ -1.7
YLR227W-BYLR227W-B TYS1P36421 394 aaKnown RBP4.44□□□□□ -1.7
YLR227W-BYLR227W-B PEA2P40091 420 aa4.44□□□□□ -1.7
YLR227W-BYLR227W-B PDR15Q04182 1529 aaKnown RBP4.44□□□□□ -1.7
YLR227W-BYLR227W-B TPD3P31383 635 aa4.44□□□□□ -1.7
YLR227W-BYLR227W-B BUD2P33314 1104 aa4.44□□□□□ -1.7
YLR227W-BYLR227W-B TRM44Q02648 567 aaKnown RBP4.43□□□□□ -1.7
YLR227W-BYLR227W-B MAL31P38156 614 aa4.43□□□□□ -1.7
YLR227W-BYLR227W-B SPO71Q03868 1245 aa4.43□□□□□ -1.7
YLR227W-BYLR227W-B AHC1Q12433 566 aa4.43□□□□□ -1.7
YLR227W-BYLR227W-B YBR238CP38330 731 aaKnown RBP4.43□□□□□ -1.7
YLR227W-BYLR227W-B YOR131CQ12486 218 aa4.43□□□□□ -1.7
YLR227W-BYLR227W-B KAR2P16474 682 aaKnown RBP4.42□□□□□ -1.7
YLR227W-BYLR227W-B PFF1P38244 976 aa4.42□□□□□ -1.7
YLR227W-BYLR227W-B XKS1P42826 600 aa4.42□□□□□ -1.7
YLR227W-BYLR227W-B CAT8P39113 1433 aa4.42□□□□□ -1.7
YLR227W-BYLR227W-B PDR5P33302 1511 aaKnown RBP4.42□□□□□ -1.7
YLR227W-BYLR227W-B GUA1P38625 525 aaKnown RBP4.42□□□□□ -1.7
YLR227W-BYLR227W-B FUS1P11710 512 aa4.42□□□□□ -1.7
YLR227W-BYLR227W-B ESL2P36168 1195 aa4.42□□□□□ -1.7
YLR227W-BYLR227W-B GIN4Q12263 1142 aa4.42□□□□□ -1.7
YLR227W-BYLR227W-B RSC8P43609 557 aaKnown RBP4.41□□□□□ -1.7
YLR227W-BYLR227W-B RMD1Q03441 430 aa4.41□□□□□ -1.7
YLR227W-BYLR227W-B YLR225CQ05948 407 aaKnown RBP4.41□□□□□ -1.7
YLR227W-BYLR227W-B ENV11P53246 860 aa4.41□□□□□ -1.7
YLR227W-BYLR227W-B FRK1Q03002 865 aaPredicted RBP4.41□□□□□ -1.7
YLR227W-BYLR227W-B MLP2P40457 1679 aa4.41□□□□□ -1.7
YLR227W-BYLR227W-B SRS2P12954 1174 aa4.41□□□□□ -1.7
YLR227W-BYLR227W-B RAD4P14736 754 aa4.41□□□□□ -1.7
YLR227W-BYLR227W-B APE3P37302 537 aaKnown RBP4.41□□□□□ -1.7
YLR227W-BYLR227W-B ART5P53244 586 aaKnown RBP4.4□□□□□ -1.7
YLR227W-BYLR227W-B BDF2Q07442 638 aa4.4□□□□□ -1.7
YLR227W-BYLR227W-B COBP00163 385 aa4.4□□□□□ -1.7
YLR227W-BYLR227W-B HEH2Q03281 663 aa4.4□□□□□ -1.7
YLR227W-BYLR227W-B SKY1Q03656 742 aa4.4□□□□□ -1.71
YLR227W-BYLR227W-B RDH54P38086 958 aa4.4□□□□□ -1.71
YLR227W-BYLR227W-B CIT3P43635 486 aa4.4□□□□□ -1.71
YLR227W-BYLR227W-B CTH1P47976 325 aa4.4□□□□□ -1.71
YLR227W-BYLR227W-B TY1B-NL2Q99337 1749 aaKnown RBP4.39□□□□□ -1.71
YLR227W-BYLR227W-B KRS1P15180 591 aaKnown RBP4.39□□□□□ -1.71
YLR227W-BYLR227W-B CSM2P40465 213 aa4.39□□□□□ -1.71
YLR227W-BYLR227W-B PIB2P53191 635 aa4.39□□□□□ -1.71
YLR227W-BYLR227W-B RMT2Q03305 412 aa4.39□□□□□ -1.71
YLR227W-BYLR227W-B ATG20Q07528 640 aa4.39□□□□□ -1.71
YLR227W-BYLR227W-B PAP2P53632 584 aaKnown RBP4.39□□□□□ -1.71
YLR227W-BYLR227W-B AOS1Q06624 347 aa4.39□□□□□ -1.71
YLR227W-BYLR227W-B HEM1P09950 548 aaPredicted RBP4.39□□□□□ -1.71
YLR227W-BYLR227W-B GDB1Q06625 1536 aa4.39□□□□□ -1.71
YLR227W-BYLR227W-B ACE2P21192 770 aa4.39□□□□□ -1.71
YLR227W-BYLR227W-B PAM1P37304 830 aaKnown RBP4.38□□□□□ -1.71
YLR227W-BYLR227W-B EAF6P47128 113 aa4.38□□□□□ -1.71
YLR227W-BYLR227W-B YVH1Q02256 364 aaKnown RBP4.38□□□□□ -1.71
YLR227W-BYLR227W-B DAL5P15365 543 aa4.38□□□□□ -1.71
YLR227W-BYLR227W-B FPR3P38911 411 aaKnown RBP4.38□□□□□ -1.71
YLR227W-BYLR227W-B MNL2Q12205 849 aa4.38□□□□□ -1.71
YLR227W-BYLR227W-B COQ8P27697 501 aa4.38□□□□□ -1.71
YLR227W-BYLR227W-B CSR2Q12734 1121 aa4.38□□□□□ -1.71
YLR227W-BYLR227W-B DOP1Q03921 1698 aa4.38□□□□□ -1.71
YLR227W-BYLR227W-B SYN8P31377 255 aa4.37□□□□□ -1.71
YLR227W-BYLR227W-B RAD54P32863 898 aa4.37□□□□□ -1.71
YLR227W-BYLR227W-B VPS29P38759 282 aa4.37□□□□□ -1.71
YLR227W-BYLR227W-B RPN8Q08723 338 aaKnown RBP4.37□□□□□ -1.71
YLR227W-BYLR227W-B RSM26P47141 266 aa4.37□□□□□ -1.71
YLR227W-BYLR227W-B VPS62P53285 467 aa4.37□□□□□ -1.71
YLR227W-BYLR227W-B ALT2P52892 507 aa4.37□□□□□ -1.71
YLR227W-BYLR227W-B YRF1-4O13559 1382 aa4.37□□□□□ -1.71
YLR227W-BYLR227W-B MTR4P47047 1073 aaKnown RBP4.37□□□□□ -1.71
YLR227W-BYLR227W-B TYW1Q08960 810 aaKnown RBP4.37□□□□□ -1.71
YLR227W-BYLR227W-B BUD27P43573 796 aaKnown RBP RIP-Chip data4.37□□□□□ -1.71not detected
YLR227W-BYLR227W-B MCM3P24279 971 aaKnown RBP4.36□□□□□ -1.71
YLR227W-BYLR227W-B YIL089WP40500 205 aa4.36□□□□□ -1.71
YLR227W-BYLR227W-B CTI6Q08923 506 aa4.36□□□□□ -1.71
YLR227W-BYLR227W-B LYS4P49367 693 aaPredicted RBP4.36□□□□□ -1.71
YLR227W-BYLR227W-B APL2P36000 726 aaPredicted RBP4.36□□□□□ -1.71
YLR227W-BYLR227W-B ISW2Q08773 1120 aa4.36□□□□□ -1.71
YLR227W-BYLR227W-B YSP2Q06681 1438 aa4.35□□□□□ -1.71
YLR227W-BYLR227W-B CLA4P48562 842 aa4.35□□□□□ -1.71
YLR227W-BYLR227W-B OSH2Q12451 1283 aa4.35□□□□□ -1.71
YLR227W-BYLR227W-B TOM71P38825 639 aaKnown RBP4.35□□□□□ -1.71
YLR227W-BYLR227W-B FIR1P40020 876 aa4.35□□□□□ -1.71
YLR227W-BYLR227W-B IMP4P53941 290 aaKnown RBP4.35□□□□□ -1.71
YLR227W-BYLR227W-B SSP2Q08646 371 aa4.35□□□□□ -1.71
YLR227W-BYLR227W-B KEX1P09620 729 aa4.35□□□□□ -1.71
YLR227W-BYLR227W-B PDI1P17967 522 aaKnown RBP4.35□□□□□ -1.71
YLR227W-BYLR227W-B EMP47P43555 445 aa4.35□□□□□ -1.71
Retrieved 100 of 5,963 RNA–protein pairs in 17 ms