RNA–Protein interactions for RNA: YLR018C

POM34, Transcript of Subunit of the transmembrane ring of the nuclear pore complex (NPC), yeastyeast

Gene POM34, Length 900 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
POM34YLR018C YRF1-3P0CX14 1859 aa12.54□□□□□ -0.4
POM34YLR018C YRF1-7P0CX15 1859 aa12.54□□□□□ -0.4
POM34YLR018C YRF1-6P53819 1859 aa12.54□□□□□ -0.4
POM34YLR018C OSM1P21375 501 aaKnown RBP12.53□□□□□ -0.4
POM34YLR018C ZDS1P50111 915 aaKnown RBP12.53□□□□□ -0.4
POM34YLR018C ATG13Q06628 738 aa12.53□□□□□ -0.4
POM34YLR018C NUP145P49687 1317 aa12.53□□□□□ -0.4
POM34YLR018C FUN12P39730 1002 aaKnown RBP12.52□□□□□ -0.41
POM34YLR018C RRT14P40470 206 aa12.51□□□□□ -0.41
POM34YLR018C YMR074CQ04773 145 aa12.51□□□□□ -0.41
POM34YLR018C RPN11P43588 306 aaKnown RBP12.5□□□□□ -0.41
POM34YLR018C KCC4P25389 1037 aa12.49□□□□□ -0.41
POM34YLR018C YBR287WP38355 427 aa12.49□□□□□ -0.41
POM34YLR018C MAM1P40065 302 aa12.49□□□□□ -0.41
POM34YLR018C GYP7P48365 746 aa12.48□□□□□ -0.41
POM34YLR018C LAM6Q08001 693 aa12.47□□□□□ -0.41
POM34YLR018C YKR075CP36155 307 aa12.46□□□□□ -0.41
POM34YLR018C YRB30P53107 440 aaPredicted RBP12.46□□□□□ -0.41
POM34YLR018C YBP2P53169 641 aa12.46□□□□□ -0.41
POM34YLR018C NSE3Q05541 303 aa12.46□□□□□ -0.41
POM34YLR018C BMS1Q08965 1183 aaKnown RBP12.46□□□□□ -0.41
POM34YLR018C UGA3P26370 528 aa12.45□□□□□ -0.42
POM34YLR018C ALE1Q08548 619 aa12.45□□□□□ -0.42
POM34YLR018C COQ4O13525 335 aa12.44□□□□□ -0.42
POM34YLR018C YJL181WP46987 611 aa12.44□□□□□ -0.42
POM34YLR018C NAB6Q03735 1134 aaKnown RBP RIP-Chip data12.43□□□□□ -0.42not detected
POM34YLR018C PRP40P33203 583 aaKnown RBP12.42□□□□□ -0.42
POM34YLR018C SRT1Q03175 343 aa12.41□□□□□ -0.42
POM34YLR018C NPR2P39923 615 aa12.4□□□□□ -0.42
POM34YLR018C DAL5P15365 543 aa12.39□□□□□ -0.43
POM34YLR018C BUD31P25337 157 aaPredicted RBP12.39□□□□□ -0.43
POM34YLR018C RMT2Q03305 412 aa12.39□□□□□ -0.43
POM34YLR018C TUM1Q08686 304 aaKnown RBP12.39□□□□□ -0.43
POM34YLR018C RAD4P14736 754 aa12.38□□□□□ -0.43
POM34YLR018C UBP1P25037 809 aa12.38□□□□□ -0.43
POM34YLR018C GRX1P25373 110 aaKnown RBP12.38□□□□□ -0.43
POM34YLR018C MAK21Q12176 1025 aaKnown RBP12.38□□□□□ -0.43
POM34YLR018C RAD2P07276 1031 aa12.37□□□□□ -0.43
POM34YLR018C EDE1P34216 1381 aa12.37□□□□□ -0.43
POM34YLR018C YIL092WP40497 633 aa12.36□□□□□ -0.43
POM34YLR018C YOL057WQ08225 711 aa12.35□□□□□ -0.43
POM34YLR018C NOP53Q12080 455 aaKnown RBP12.35□□□□□ -0.43
POM34YLR018C LYS4P49367 693 aaPredicted RBP12.34□□□□□ -0.43
POM34YLR018C ZDS2P54786 942 aa12.34□□□□□ -0.43
POM34YLR018C MSB4Q12317 492 aa12.34□□□□□ -0.43
POM34YLR018C LYS2P07702 1392 aa12.33□□□□□ -0.44
POM34YLR018C TFA1P36100 482 aa12.3□□□□□ -0.44
POM34YLR018C BUD27P43573 796 aaKnown RBP RIP-Chip data12.3□□□□□ -0.44not detected
POM34YLR018C YFR016CP43597 1233 aaKnown RBP12.3□□□□□ -0.44
POM34YLR018C GRE2Q12068 342 aaKnown RBP12.3□□□□□ -0.44
POM34YLR018C YPP1P46951 817 aa12.29□□□□□ -0.44
POM34YLR018C VPS64Q03944 604 aa12.29□□□□□ -0.44
POM34YLR018C SSP2Q08646 371 aa12.29□□□□□ -0.44
POM34YLR018C MRP7P12687 371 aa12.27□□□□□ -0.45
POM34YLR018C APL2P36000 726 aaPredicted RBP12.27□□□□□ -0.45
POM34YLR018C FPR3P38911 411 aaKnown RBP12.27□□□□□ -0.45
POM34YLR018C YGR122WP53272 402 aa12.27□□□□□ -0.45
POM34YLR018C CSI1Q04368 295 aa12.27□□□□□ -0.45
POM34YLR018C NOP8Q08287 484 aaPredicted RBP12.27□□□□□ -0.45
POM34YLR018C PRI1P10363 409 aa12.26□□□□□ -0.45
POM34YLR018C TEA1P47988 759 aa12.26□□□□□ -0.45
POM34YLR018C PHM7Q12252 991 aa12.26□□□□□ -0.45
POM34YLR018C TRP5P00931 707 aaKnown RBP12.25□□□□□ -0.45
POM34YLR018C RAD24P32641 659 aa12.25□□□□□ -0.45
POM34YLR018C DNM1P54861 757 aa12.25□□□□□ -0.45
POM34YLR018C YDR306CQ06640 478 aa12.25□□□□□ -0.45
POM34YLR018C RIM15P43565 1770 aa12.25□□□□□ -0.45
POM34YLR018C SER1P33330 395 aaKnown RBP12.24□□□□□ -0.45
POM34YLR018C POL32P47110 350 aa12.24□□□□□ -0.45
POM34YLR018C MDG1P53885 366 aa12.24□□□□□ -0.45
POM34YLR018C PUF6Q04373 656 aaKnown RBP12.24□□□□□ -0.45
POM34YLR018C CST6P40535 587 aa12.23□□□□□ -0.45
POM34YLR018C YGL082WP53155 381 aa12.23□□□□□ -0.45
POM34YLR018C SWC3P31376 625 aa12.22□□□□□ -0.45
POM34YLR018C NUP133P36161 1157 aa12.22□□□□□ -0.45
POM34YLR018C CTH1P47976 325 aa12.22□□□□□ -0.45
POM34YLR018C YPR204WQ08995 1032 aa12.22□□□□□ -0.45
POM34YLR018C BUG1Q12191 341 aa12.22□□□□□ -0.45
POM34YLR018C NYV1Q12255 253 aa12.22□□□□□ -0.45
POM34YLR018C ARG8P18544 423 aa12.21□□□□□ -0.45
POM34YLR018C YBL086CP38177 466 aa12.21□□□□□ -0.45
POM34YLR018C SWI1P09547 1314 aa12.2□□□□□ -0.46
POM34YLR018C DCD1P06773 312 aa12.2□□□□□ -0.46
POM34YLR018C RPS19AP07280 144 aaKnown RBP12.2□□□□□ -0.46
POM34YLR018C RPS19BP07281 144 aaPredicted RBP12.2□□□□□ -0.46
POM34YLR018C ALD2P47771 506 aa12.2□□□□□ -0.46
POM34YLR018C YNG2P38806 282 aaKnown RBP12.19□□□□□ -0.46
POM34YLR018C BDF1P35817 686 aa12.18□□□□□ -0.46
POM34YLR018C RPG1P38249 964 aaKnown RBP12.18□□□□□ -0.46
POM34YLR018C NOP2P40991 618 aaKnown RBP12.18□□□□□ -0.46
POM34YLR018C PKH1Q03407 766 aa12.18□□□□□ -0.46
POM34YLR018C YJR008WP47085 338 aa12.17□□□□□ -0.46
POM34YLR018C SSA2P10592 639 aaKnown RBP12.16□□□□□ -0.46
POM34YLR018C ILV3P39522 585 aaKnown RBP12.16□□□□□ -0.46
POM34YLR018C BOI2P39969 1040 aa12.16□□□□□ -0.46
POM34YLR018C YLR271WQ06152 274 aa12.16□□□□□ -0.46
POM34YLR018C CTI6Q08923 506 aa12.16□□□□□ -0.46
POM34YLR018C LPD1P09624 499 aaKnown RBP12.15□□□□□ -0.46
POM34YLR018C UGA2P38067 497 aa12.15□□□□□ -0.46
POM34YLR018C GTT3P39996 337 aa12.15□□□□□ -0.46
Retrieved 100 of 5,963 RNA–protein pairs in 14.5 ms