RNA–Protein interactions for RNA: YKR094C

RPL40B, Transcript of Ubiquitin-ribosomal 60S subunit protein L40B fusion protein, yeastyeast

Gene RPL40B, Length 387 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPL40BYKR094C SCW11P53189 542 aa6.35□□□□□ -1.39
RPL40BYKR094C RSC30P38781 883 aa6.34□□□□□ -1.39
RPL40BYKR094C RTT106P40161 455 aa6.34□□□□□ -1.39
RPL40BYKR094C YNR021WP53723 404 aaKnown RBP6.34□□□□□ -1.39
RPL40BYKR094C TY1A-BLQ12266 440 aa6.34□□□□□ -1.39
RPL40BYKR094C YBL086CP38177 466 aa6.33□□□□□ -1.4
RPL40BYKR094C AAD14P42884 376 aa6.33□□□□□ -1.4
RPL40BYKR094C KTR1P27810 393 aaKnown RBP6.32□□□□□ -1.4
RPL40BYKR094C YGR035CP53222 116 aa6.32□□□□□ -1.4
RPL40BYKR094C APP1P53933 587 aa6.32□□□□□ -1.4
RPL40BYKR094C PKH3Q03306 898 aaPredicted RBP6.32□□□□□ -1.4
RPL40BYKR094C ARG82P07250 355 aa6.31□□□□□ -1.4
RPL40BYKR094C TRK2P28584 889 aa6.3□□□□□ -1.4
RPL40BYKR094C DLD1P32891 587 aa6.3□□□□□ -1.4
RPL40BYKR094C LSC2P53312 427 aa6.3□□□□□ -1.4
RPL40BYKR094C HPF1Q05164 967 aa6.29□□□□□ -1.4
RPL40BYKR094C ARG8P18544 423 aa6.28□□□□□ -1.4
RPL40BYKR094C EMW1P42842 904 aaKnown RBP6.27□□□□□ -1.41
RPL40BYKR094C YJR098CP47139 656 aa6.27□□□□□ -1.41
RPL40BYKR094C UBP2Q01476 1272 aa6.27□□□□□ -1.41
RPL40BYKR094C TCB1Q12466 1186 aa6.26□□□□□ -1.41
RPL40BYKR094C FIG4P42837 879 aa6.25□□□□□ -1.41
RPL40BYKR094C CSN12P47130 423 aa6.23□□□□□ -1.41
RPL40BYKR094C AIM7Q12156 149 aa6.23□□□□□ -1.41
RPL40BYKR094C MKS1P34072 584 aa6.22□□□□□ -1.41
RPL40BYKR094C ROG3P43602 733 aa6.22□□□□□ -1.41
RPL40BYKR094C MTC5Q03897 1148 aa6.22□□□□□ -1.41
RPL40BYKR094C DFG5Q05031 458 aa6.22□□□□□ -1.41
RPL40BYKR094C OSH7P38755 437 aa6.2□□□□□ -1.42
RPL40BYKR094C TY1A-MR1Q04215 440 aa6.2□□□□□ -1.42
RPL40BYKR094C RAD59Q12223 238 aa6.2□□□□□ -1.42
RPL40BYKR094C CCP1P00431 361 aa6.18□□□□□ -1.42
RPL40BYKR094C TEC1P18412 486 aa6.18□□□□□ -1.42
RPL40BYKR094C YPR084WQ06821 456 aa6.17□□□□□ -1.42
RPL40BYKR094C BDS1Q08347 646 aa6.15□□□□□ -1.42
RPL40BYKR094C YPR204WQ08995 1032 aa6.15□□□□□ -1.42
RPL40BYKR094C FBP26P32604 452 aa6.14□□□□□ -1.43
RPL40BYKR094C DPH6Q12429 685 aa6.13□□□□□ -1.43
RPL40BYKR094C NAM8Q00539 523 aaKnown RBP6.12□□□□□ -1.43
RPL40BYKR094C STE6P12866 1290 aa6.11□□□□□ -1.43
RPL40BYKR094C CDC19P00549 500 aaKnown RBP6.1□□□□□ -1.43
RPL40BYKR094C MAK16P10962 306 aaPredicted RBP6.1□□□□□ -1.43
RPL40BYKR094C GUT2P32191 649 aa6.09□□□□□ -1.43
RPL40BYKR094C ICP55P40051 511 aa6.09□□□□□ -1.43
RPL40BYKR094C JJJ3P47138 172 aa6.09□□□□□ -1.43
RPL40BYKR094C LYS5P50113 272 aa6.09□□□□□ -1.43
RPL40BYKR094C ATG20Q07528 640 aa6.08□□□□□ -1.44
RPL40BYKR094C MDJ1P35191 511 aa6.07□□□□□ -1.44
RPL40BYKR094C SSA2P10592 639 aaKnown RBP6.06□□□□□ -1.44
RPL40BYKR094C ISU1Q03020 165 aa6.06□□□□□ -1.44
RPL40BYKR094C PUS1Q12211 544 aaKnown RBP6.06□□□□□ -1.44
RPL40BYKR094C VTC4P47075 721 aa6.05□□□□□ -1.44
RPL40BYKR094C KIN1P13185 1064 aa6.04□□□□□ -1.44
RPL40BYKR094C CUZ1P53899 274 aa6.04□□□□□ -1.44
RPL40BYKR094C LSB3P43603 459 aaKnown RBP6.03□□□□□ -1.44
RPL40BYKR094C NAF1P53919 492 aaKnown RBP6.03□□□□□ -1.44
RPL40BYKR094C STE20Q03497 939 aaKnown RBP6.03□□□□□ -1.44
RPL40BYKR094C FRA1Q07825 749 aa6.03□□□□□ -1.44
RPL40BYKR094C PHM7Q12252 991 aa6.03□□□□□ -1.44
RPL40BYKR094C DAL1P32375 460 aa6.02□□□□□ -1.45
RPL40BYKR094C DLD3P39976 496 aaKnown RBP6.02□□□□□ -1.45
RPL40BYKR094C NSG2P53898 299 aa6.01□□□□□ -1.45
RPL40BYKR094C ISF1P32488 338 aa5.98□□□□□ -1.45
RPL40BYKR094C CEM1P39525 442 aa5.98□□□□□ -1.45
RPL40BYKR094C THI72Q08579 599 aa5.98□□□□□ -1.45
RPL40BYKR094C RPP2BP02400 110 aaKnown RBP5.97□□□□□ -1.45
RPL40BYKR094C YFL066CP43538 392 aa5.97□□□□□ -1.45
RPL40BYKR094C EMP47P43555 445 aa5.97□□□□□ -1.45
RPL40BYKR094C ISR1Q06098 443 aaKnown RBP5.97□□□□□ -1.45
RPL40BYKR094C GUA1P38625 525 aaKnown RBP5.96□□□□□ -1.46
RPL40BYKR094C UBP15P50101 1230 aa5.96□□□□□ -1.46
RPL40BYKR094C WTM2Q12206 467 aa5.96□□□□□ -1.46
RPL40BYKR094C AI1P03875 834 aa5.95□□□□□ -1.46
RPL40BYKR094C SSN3P39073 555 aa5.95□□□□□ -1.46
RPL40BYKR094C MCM16Q12262 181 aa5.95□□□□□ -1.46
RPL40BYKR094C TY1A-DR3Q12441 440 aa5.95□□□□□ -1.46
RPL40BYKR094C SLA1P32790 1244 aa5.94□□□□□ -1.46
RPL40BYKR094C APL6P46682 809 aa5.94□□□□□ -1.46
RPL40BYKR094C MSN5P52918 1224 aa5.94□□□□□ -1.46
RPL40BYKR094C YMR265CQ03508 461 aaKnown RBP5.94□□□□□ -1.46
RPL40BYKR094C DAT1P13483 248 aaKnown RBP5.93□□□□□ -1.46
RPL40BYKR094C DIT1P21623 536 aa5.93□□□□□ -1.46
RPL40BYKR094C UTR2P32623 467 aa5.93□□□□□ -1.46
RPL40BYKR094C CSE4P36012 229 aa5.93□□□□□ -1.46
RPL40BYKR094C SYT1Q06836 1226 aa5.93□□□□□ -1.46
RPL40BYKR094C SPT2P06843 333 aaPredicted RBP5.92□□□□□ -1.46
RPL40BYKR094C YDJ1P25491 409 aaKnown RBP5.92□□□□□ -1.46
RPL40BYKR094C HAL5P38970 855 aaKnown RBP5.92□□□□□ -1.46
RPL40BYKR094C UTP7P40055 554 aaKnown RBP5.92□□□□□ -1.46
RPL40BYKR094C MRX12P47084 519 aa5.91□□□□□ -1.46
RPL40BYKR094C KRE33P53914 1056 aaKnown RBP5.91□□□□□ -1.46
RPL40BYKR094C ADE12P80210 433 aaKnown RBP5.91□□□□□ -1.46
RPL40BYKR094C SPT5P27692 1063 aaKnown RBP5.9□□□□□ -1.46
RPL40BYKR094C YBL036CP38197 257 aa5.9□□□□□ -1.46
RPL40BYKR094C AHP1P38013 176 aaKnown RBP5.89□□□□□ -1.47
RPL40BYKR094C SBE2P42223 864 aaKnown RBP5.89□□□□□ -1.47
RPL40BYKR094C CCT8P47079 568 aaKnown RBP5.89□□□□□ -1.47
RPL40BYKR094C TBS1P38114 1094 aa5.88□□□□□ -1.47
RPL40BYKR094C YDR461C-AQ2V2P7 80 aa5.88□□□□□ -1.47
RPL40BYKR094C LEU3P08638 886 aa5.87□□□□□ -1.47
Retrieved 100 of 5,963 RNA–protein pairs in 13.9 ms