RNA–Protein interactions for RNA: YKR039W

GAP1, Transcript of General amino acid permease, yeastyeast

Gene GAP1, Length 1,809 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
GAP1YKR039W DAL5P15365 543 aa12.29□□□□□ -0.44
GAP1YKR039W MEC3Q02574 474 aa12.29□□□□□ -0.44
GAP1YKR039W IMH1Q06704 911 aaKnown RBP12.29□□□□□ -0.44
GAP1YKR039W BUD27P43573 796 aaKnown RBP RIP-Chip data12.28□□□□□ -0.44not detected
GAP1YKR039W INP54Q08227 384 aaKnown RBP12.28□□□□□ -0.44
GAP1YKR039W KCC4P25389 1037 aa12.27□□□□□ -0.45
GAP1YKR039W UGA3P26370 528 aa12.27□□□□□ -0.45
GAP1YKR039W BMS1Q08965 1183 aaKnown RBP12.27□□□□□ -0.45
GAP1YKR039W NUP145P49687 1317 aa12.26□□□□□ -0.45
GAP1YKR039W YKL133CP36066 463 aa12.26□□□□□ -0.45
GAP1YKR039W NSE3Q05541 303 aa12.26□□□□□ -0.45
GAP1YKR039W EDE1P34216 1381 aa12.26□□□□□ -0.45
GAP1YKR039W TFA1P36100 482 aa12.25□□□□□ -0.45
GAP1YKR039W YBR287WP38355 427 aa12.25□□□□□ -0.45
GAP1YKR039W ADE16P54113 591 aaKnown RBP12.25□□□□□ -0.45
GAP1YKR039W SRT1Q03175 343 aa12.25□□□□□ -0.45
GAP1YKR039W YFR016CP43597 1233 aaKnown RBP12.24□□□□□ -0.45
GAP1YKR039W YRF1-3P0CX14 1859 aa12.24□□□□□ -0.45
GAP1YKR039W YRF1-7P0CX15 1859 aa12.24□□□□□ -0.45
GAP1YKR039W YRF1-6P53819 1859 aa12.24□□□□□ -0.45
GAP1YKR039W COQ4O13525 335 aa12.23□□□□□ -0.45
GAP1YKR039W OSM1P21375 501 aaKnown RBP12.22□□□□□ -0.45
GAP1YKR039W FRK1Q03002 865 aaPredicted RBP12.21□□□□□ -0.45
GAP1YKR039W ROM2P51862 1356 aaKnown RBP12.21□□□□□ -0.45
GAP1YKR039W ATG13Q06628 738 aa12.21□□□□□ -0.46
GAP1YKR039W POL32P47110 350 aa12.19□□□□□ -0.46
GAP1YKR039W LYS2P07702 1392 aa12.19□□□□□ -0.46
GAP1YKR039W YIL055CP40523 627 aaKnown RBP12.17□□□□□ -0.46
GAP1YKR039W DOT5P40553 215 aa12.17□□□□□ -0.46
GAP1YKR039W ALE1Q08548 619 aa12.17□□□□□ -0.46
GAP1YKR039W YOL057WQ08225 711 aa12.16□□□□□ -0.46
GAP1YKR039W RAD4P14736 754 aa12.16□□□□□ -0.46
GAP1YKR039W YBP2P53169 641 aa12.16□□□□□ -0.46
GAP1YKR039W PUF6Q04373 656 aaKnown RBP12.16□□□□□ -0.46
GAP1YKR039W YPP1P46951 817 aa12.15□□□□□ -0.46
GAP1YKR039W TRP5P00931 707 aaKnown RBP12.14□□□□□ -0.47
GAP1YKR039W FOX2Q02207 900 aaKnown RBP12.14□□□□□ -0.47
GAP1YKR039W COBP00163 385 aa12.14□□□□□ -0.47
GAP1YKR039W CSI1Q04368 295 aa12.12□□□□□ -0.47
GAP1YKR039W RMT2Q03305 412 aa12.11□□□□□ -0.47
GAP1YKR039W NOP8Q08287 484 aaPredicted RBP12.11□□□□□ -0.47
GAP1YKR039W RPS19AP07280 144 aaKnown RBP12.09□□□□□ -0.47
GAP1YKR039W RPS19BP07281 144 aaPredicted RBP12.09□□□□□ -0.47
GAP1YKR039W MRP7P12687 371 aa12.09□□□□□ -0.47
GAP1YKR039W RPC31P17890 251 aa12.09□□□□□ -0.47
GAP1YKR039W ZDS2P54786 942 aa12.09□□□□□ -0.47
GAP1YKR039W YKR075CP36155 307 aa12.08□□□□□ -0.48
GAP1YKR039W YNG2P38806 282 aaKnown RBP12.08□□□□□ -0.48
GAP1YKR039W LAM6Q08001 693 aa12.08□□□□□ -0.48
GAP1YKR039W DNM1P54861 757 aa12.07□□□□□ -0.48
GAP1YKR039W YDR306CQ06640 478 aa12.07□□□□□ -0.48
GAP1YKR039W NOP53Q12080 455 aaKnown RBP12.07□□□□□ -0.48
GAP1YKR039W GRX1P25373 110 aaKnown RBP12.07□□□□□ -0.48
GAP1YKR039W YGR122WP53272 402 aa12.07□□□□□ -0.48
GAP1YKR039W TUM1Q08686 304 aaKnown RBP12.07□□□□□ -0.48
GAP1YKR039W RAD24P32641 659 aa12.06□□□□□ -0.48
GAP1YKR039W SPO1P53541 631 aa12.04□□□□□ -0.48
GAP1YKR039W SSP2Q08646 371 aa12.04□□□□□ -0.48
GAP1YKR039W CST6P40535 587 aa12.04□□□□□ -0.48
GAP1YKR039W RPN11P43588 306 aaKnown RBP12.04□□□□□ -0.48
GAP1YKR039W PRP40P33203 583 aaKnown RBP12.03□□□□□ -0.48
GAP1YKR039W ILV3P39522 585 aaKnown RBP12.03□□□□□ -0.48
GAP1YKR039W YJL181WP46987 611 aa12.03□□□□□ -0.48
GAP1YKR039W NUP133P36161 1157 aa12.02□□□□□ -0.48
GAP1YKR039W SWC3P31376 625 aa12.02□□□□□ -0.49
GAP1YKR039W VPS64Q03944 604 aa12.02□□□□□ -0.49
GAP1YKR039W MDG1P53885 366 aa12.01□□□□□ -0.49
GAP1YKR039W YMR074CQ04773 145 aa12.01□□□□□ -0.49
GAP1YKR039W BOI2P39969 1040 aa12□□□□□ -0.49
GAP1YKR039W YJR008WP47085 338 aa12□□□□□ -0.49
GAP1YKR039W SWI1P09547 1314 aa12□□□□□ -0.49
GAP1YKR039W PHM7Q12252 991 aa12□□□□□ -0.49
GAP1YKR039W APL2P36000 726 aaPredicted RBP11.99□□□□□ -0.49
GAP1YKR039W ECM16Q04217 1267 aaKnown RBP11.98□□□□□ -0.49
GAP1YKR039W MSB4Q12317 492 aa11.98□□□□□ -0.49
GAP1YKR039W NMD2P38798 1089 aaKnown RBP11.97□□□□□ -0.49
GAP1YKR039W YPR204WQ08995 1032 aa11.97□□□□□ -0.49
GAP1YKR039W RIM15P43565 1770 aa11.97□□□□□ -0.49
GAP1YKR039W GCD7P32502 381 aaPredicted RBP11.97□□□□□ -0.49
GAP1YKR039W HGH1P48362 394 aaKnown RBP11.96□□□□□ -0.49
GAP1YKR039W ARG8P18544 423 aa11.95□□□□□ -0.5
GAP1YKR039W GLN1P32288 370 aaKnown RBP11.95□□□□□ -0.5
GAP1YKR039W NPR2P39923 615 aa11.95□□□□□ -0.5
GAP1YKR039W LPD1P09624 499 aaKnown RBP11.95□□□□□ -0.5
GAP1YKR039W TEA1P47988 759 aa11.95□□□□□ -0.5
GAP1YKR039W YLR271WQ06152 274 aa11.95□□□□□ -0.5
GAP1YKR039W UBP12P39538 1254 aa11.94□□□□□ -0.5
GAP1YKR039W GRE2Q12068 342 aaKnown RBP11.93□□□□□ -0.5
GAP1YKR039W UBP1P25037 809 aa11.93□□□□□ -0.5
GAP1YKR039W SER1P33330 395 aaKnown RBP11.93□□□□□ -0.5
GAP1YKR039W RFC1P38630 861 aaKnown RBP11.93□□□□□ -0.5
GAP1YKR039W PKH1Q03407 766 aa11.93□□□□□ -0.5
GAP1YKR039W SET1P38827 1080 aaKnown RBP11.92□□□□□ -0.5
GAP1YKR039W YGL082WP53155 381 aa11.92□□□□□ -0.5
GAP1YKR039W NKP2Q06162 153 aa11.92□□□□□ -0.5
GAP1YKR039W DCD1P06773 312 aa11.91□□□□□ -0.5
GAP1YKR039W NYV1Q12255 253 aa11.9□□□□□ -0.5
GAP1YKR039W BUD31P25337 157 aaPredicted RBP11.89□□□□□ -0.51
GAP1YKR039W ITC1P53125 1264 aa11.88□□□□□ -0.51
GAP1YKR039W SSF1P38789 453 aaPredicted RBP11.87□□□□□ -0.51
Retrieved 100 of 5,963 RNA–protein pairs in 15.4 ms