RNA–Protein interactions for RNA: YIL061C

SNP1, Transcript of Component of U1 snRNP required for mRNA splicing via spliceosome, yeastyeast

Gene SNP1, Length 903 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SNP1YIL061C TCB1Q12466 1186 aa9.53□□□□□ -0.88
SNP1YIL061C EDE1P34216 1381 aa9.52□□□□□ -0.88
SNP1YIL061C HSP104P31539 908 aaKnown RBP9.52□□□□□ -0.89
SNP1YIL061C AOS1Q06624 347 aa9.52□□□□□ -0.89
SNP1YIL061C RRT14P40470 206 aa9.51□□□□□ -0.89
SNP1YIL061C XKS1P42826 600 aa9.51□□□□□ -0.89
SNP1YIL061C YFR016CP43597 1233 aaKnown RBP9.51□□□□□ -0.89
SNP1YIL061C RCR1P38212 213 aa9.5□□□□□ -0.89
SNP1YIL061C POL32P47110 350 aa9.5□□□□□ -0.89
SNP1YIL061C RSF2P46974 1380 aa9.5□□□□□ -0.89
SNP1YIL061C RPC31P17890 251 aa9.49□□□□□ -0.89
SNP1YIL061C SRT1Q03175 343 aa9.48□□□□□ -0.89
SNP1YIL061C REB1P21538 810 aa9.46□□□□□ -0.9
SNP1YIL061C UGA3P26370 528 aa9.46□□□□□ -0.9
SNP1YIL061C INP54Q08227 384 aaKnown RBP9.46□□□□□ -0.9
SNP1YIL061C BMS1Q08965 1183 aaKnown RBP9.46□□□□□ -0.9
SNP1YIL061C LYS2P07702 1392 aa9.46□□□□□ -0.9
SNP1YIL061C COQ4O13525 335 aa9.45□□□□□ -0.9
SNP1YIL061C KCC4P25389 1037 aa9.45□□□□□ -0.9
SNP1YIL061C ENT1Q12518 454 aa9.45□□□□□ -0.9
SNP1YIL061C NUP145P49687 1317 aa9.45□□□□□ -0.9
SNP1YIL061C YPP1P46951 817 aa9.44□□□□□ -0.9
SNP1YIL061C NSE3Q05541 303 aa9.44□□□□□ -0.9
SNP1YIL061C TRP5P00931 707 aaKnown RBP9.43□□□□□ -0.9
SNP1YIL061C PUF6Q04373 656 aaKnown RBP9.43□□□□□ -0.9
SNP1YIL061C TSR3Q12094 313 aaKnown RBP9.43□□□□□ -0.9
SNP1YIL061C YAH1Q12184 172 aaKnown RBP9.42□□□□□ -0.9
SNP1YIL061C YBR287WP38355 427 aa9.41□□□□□ -0.9
SNP1YIL061C IES2P40154 320 aa9.41□□□□□ -0.9
SNP1YIL061C ENV9Q08651 330 aa9.41□□□□□ -0.9
SNP1YIL061C RPS19AP07280 144 aaKnown RBP9.4□□□□□ -0.9
SNP1YIL061C RPS19BP07281 144 aaPredicted RBP9.4□□□□□ -0.9
SNP1YIL061C MEC3Q02574 474 aa9.4□□□□□ -0.9
SNP1YIL061C CSI1Q04368 295 aa9.4□□□□□ -0.9
SNP1YIL061C YOL057WQ08225 711 aa9.4□□□□□ -0.9
SNP1YIL061C YRF1-3P0CX14 1859 aa9.39□□□□□ -0.91
SNP1YIL061C YRF1-7P0CX15 1859 aa9.39□□□□□ -0.91
SNP1YIL061C YRF1-6P53819 1859 aa9.39□□□□□ -0.91
SNP1YIL061C YIR014WP40570 242 aa9.39□□□□□ -0.91
SNP1YIL061C ADE16P54113 591 aaKnown RBP9.39□□□□□ -0.91
SNP1YIL061C OSM1P21375 501 aaKnown RBP9.38□□□□□ -0.91
SNP1YIL061C ILV3P39522 585 aaKnown RBP9.37□□□□□ -0.91
SNP1YIL061C APP1P53933 587 aa9.37□□□□□ -0.91
SNP1YIL061C YDR306CQ06640 478 aa9.37□□□□□ -0.91
SNP1YIL061C RAD4P14736 754 aa9.36□□□□□ -0.91
SNP1YIL061C YKL133CP36066 463 aa9.36□□□□□ -0.91
SNP1YIL061C YNG2P38806 282 aaKnown RBP9.36□□□□□ -0.91
SNP1YIL061C OPY1P38271 328 aa9.35□□□□□ -0.91
SNP1YIL061C ALE1Q08548 619 aa9.35□□□□□ -0.91
SNP1YIL061C MRP7P12687 371 aa9.34□□□□□ -0.91
SNP1YIL061C RAD24P32641 659 aa9.34□□□□□ -0.91
SNP1YIL061C ECM16Q04217 1267 aaKnown RBP9.34□□□□□ -0.91
SNP1YIL061C ROM2P51862 1356 aaKnown RBP9.34□□□□□ -0.91
SNP1YIL061C SPO1P53541 631 aa9.33□□□□□ -0.92
SNP1YIL061C FRK1Q03002 865 aaPredicted RBP9.33□□□□□ -0.92
SNP1YIL061C IMH1Q06704 911 aaKnown RBP9.33□□□□□ -0.92
SNP1YIL061C YJR008WP47085 338 aa9.32□□□□□ -0.92
SNP1YIL061C YGR122WP53272 402 aa9.32□□□□□ -0.92
SNP1YIL061C DNM1P54861 757 aa9.32□□□□□ -0.92
SNP1YIL061C NOP8Q08287 484 aaPredicted RBP9.32□□□□□ -0.92
SNP1YIL061C GCD7P32502 381 aaPredicted RBP9.31□□□□□ -0.92
SNP1YIL061C BOI2P39969 1040 aa9.31□□□□□ -0.92
SNP1YIL061C HGH1P48362 394 aaKnown RBP9.31□□□□□ -0.92
SNP1YIL061C ATG13Q06628 738 aa9.31□□□□□ -0.92
SNP1YIL061C IME2P32581 645 aa9.3□□□□□ -0.92
SNP1YIL061C YBP2P53169 641 aa9.3□□□□□ -0.92
SNP1YIL061C ZDS2P54786 942 aa9.3□□□□□ -0.92
SNP1YIL061C RMT2Q03305 412 aa9.3□□□□□ -0.92
SNP1YIL061C CST6P40535 587 aa9.29□□□□□ -0.92
SNP1YIL061C NMD2P38798 1089 aaKnown RBP9.28□□□□□ -0.92
SNP1YIL061C DOT5P40553 215 aa9.28□□□□□ -0.92
SNP1YIL061C NKP2Q06162 153 aa9.28□□□□□ -0.92
SNP1YIL061C SWI1P09547 1314 aa9.28□□□□□ -0.92
SNP1YIL061C SWC3P31376 625 aa9.27□□□□□ -0.93
SNP1YIL061C FOX2Q02207 900 aaKnown RBP9.27□□□□□ -0.93
SNP1YIL061C RAD50P12753 1312 aa9.27□□□□□ -0.93
SNP1YIL061C CDC16P09798 840 aa9.26□□□□□ -0.93
SNP1YIL061C NUP133P36161 1157 aa9.26□□□□□ -0.93
SNP1YIL061C TUM1Q08686 304 aaKnown RBP9.26□□□□□ -0.93
SNP1YIL061C NOP53Q12080 455 aaKnown RBP9.26□□□□□ -0.93
SNP1YIL061C COBP00163 385 aa9.25□□□□□ -0.93
SNP1YIL061C SSP2Q08646 371 aa9.25□□□□□ -0.93
SNP1YIL061C GRX1P25373 110 aaKnown RBP9.24□□□□□ -0.93
SNP1YIL061C YKR075CP36155 307 aa9.24□□□□□ -0.93
SNP1YIL061C RFC1P38630 861 aaKnown RBP9.24□□□□□ -0.93
SNP1YIL061C SET1P38827 1080 aaKnown RBP9.24□□□□□ -0.93
SNP1YIL061C MDG1P53885 366 aa9.23□□□□□ -0.93
SNP1YIL061C YPR204WQ08995 1032 aa9.23□□□□□ -0.93
SNP1YIL061C PHM7Q12252 991 aa9.23□□□□□ -0.93
SNP1YIL061C LPD1P09624 499 aaKnown RBP9.22□□□□□ -0.93
SNP1YIL061C UBP12P39538 1254 aa9.22□□□□□ -0.93
SNP1YIL061C YLR271WQ06152 274 aa9.22□□□□□ -0.93
SNP1YIL061C PCT1P13259 424 aa9.21□□□□□ -0.94
SNP1YIL061C ARG8P18544 423 aa9.21□□□□□ -0.94
SNP1YIL061C APL2P36000 726 aaPredicted RBP9.21□□□□□ -0.94
SNP1YIL061C GCR2Q01722 534 aa9.21□□□□□ -0.94
SNP1YIL061C VPS64Q03944 604 aa9.21□□□□□ -0.94
SNP1YIL061C YIL055CP40523 627 aaKnown RBP9.2□□□□□ -0.94
SNP1YIL061C DCD1P06773 312 aa9.18□□□□□ -0.94
SNP1YIL061C DLD1P32891 587 aa9.18□□□□□ -0.94
Retrieved 100 of 5,963 RNA–protein pairs in 10.1 ms