RNA–Protein interactions for RNA: YIL030C

SSM4, Transcript of Ubiquitin-protein ligase involved in ER-associated protein degradation, yeastyeast

Gene SSM4, Length 3,960 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSM4YIL030C ECM16Q04217 1267 aaKnown RBP4.44□□□□□ -1.7
SSM4YIL030C RTT109Q07794 436 aa4.44□□□□□ -1.7
SSM4YIL030C FLO1P32768 1537 aa4.44□□□□□ -1.7
SSM4YIL030C STE11P23561 717 aa4.43□□□□□ -1.7
SSM4YIL030C GCR2Q01722 534 aa4.43□□□□□ -1.7
SSM4YIL030C ILV3P39522 585 aaKnown RBP4.43□□□□□ -1.7
SSM4YIL030C KRI1P42846 591 aaKnown RBP4.43□□□□□ -1.7
SSM4YIL030C RFT1P38206 574 aaPredicted RBP4.43□□□□□ -1.7
SSM4YIL030C YPP1P46951 817 aa4.43□□□□□ -1.7
SSM4YIL030C CTF4Q01454 927 aa4.42□□□□□ -1.7
SSM4YIL030C MPP10P47083 593 aaKnown RBP4.42□□□□□ -1.7
SSM4YIL030C MSH1P25846 959 aa4.42□□□□□ -1.7
SSM4YIL030C RKM3P38222 552 aa4.42□□□□□ -1.7
SSM4YIL030C MTR4P47047 1073 aaKnown RBP4.42□□□□□ -1.7
SSM4YIL030C HRQ1Q05549 1077 aa4.42□□□□□ -1.7
SSM4YIL030C AIM9P40053 627 aaKnown RBP4.41□□□□□ -1.7
SSM4YIL030C HST1P53685 503 aa4.41□□□□□ -1.7
SSM4YIL030C MAM1P40065 302 aa4.41□□□□□ -1.7
SSM4YIL030C TAF8Q03750 510 aa4.41□□□□□ -1.7
SSM4YIL030C GSC2P40989 1895 aa4.4□□□□□ -1.7
SSM4YIL030C YPL150WQ12152 901 aa4.4□□□□□ -1.7
SSM4YIL030C URN1Q06525 465 aaKnown RBP4.4□□□□□ -1.71
SSM4YIL030C HIM1Q06674 414 aa4.4□□□□□ -1.71
SSM4YIL030C CTR9P89105 1077 aa4.39□□□□□ -1.71
SSM4YIL030C DSD1P53095 428 aa4.39□□□□□ -1.71
SSM4YIL030C YOL087CQ99247 1116 aa4.39□□□□□ -1.71
SSM4YIL030C NTH2P35172 780 aa4.39□□□□□ -1.71
SSM4YIL030C CIN4P39110 191 aa4.39□□□□□ -1.71
SSM4YIL030C NOP53Q12080 455 aaKnown RBP4.38□□□□□ -1.71
SSM4YIL030C RQC2Q12532 1038 aaKnown RBP4.38□□□□□ -1.71
SSM4YIL030C KEX1P09620 729 aa4.37□□□□□ -1.71
SSM4YIL030C PBY1P38254 753 aa4.37□□□□□ -1.71
SSM4YIL030C RAD2P07276 1031 aa4.37□□□□□ -1.71
SSM4YIL030C NOP14Q99207 810 aaKnown RBP4.37□□□□□ -1.71
SSM4YIL030C RPL22AP05749 121 aaKnown RBP4.36□□□□□ -1.71
SSM4YIL030C STU2P46675 888 aa4.36□□□□□ -1.71
SSM4YIL030C SRT1Q03175 343 aa4.36□□□□□ -1.71
SSM4YIL030C PDI1P17967 522 aaKnown RBP4.35□□□□□ -1.71
SSM4YIL030C VPS8P39702 1274 aa4.35□□□□□ -1.71
SSM4YIL030C NPA3P47122 385 aa4.35□□□□□ -1.71
SSM4YIL030C PET111P08468 800 aa4.35□□□□□ -1.71
SSM4YIL030C MAK21Q12176 1025 aaKnown RBP4.35□□□□□ -1.71
SSM4YIL030C DDP1Q99321 188 aaKnown RBP4.35□□□□□ -1.71
SSM4YIL030C LEU2P04173 364 aaPredicted RBP4.34□□□□□ -1.71
SSM4YIL030C YLR407WQ06070 228 aa4.34□□□□□ -1.71
SSM4YIL030C TAF13P11747 167 aa4.34□□□□□ -1.71
SSM4YIL030C RPN12P32496 274 aa4.34□□□□□ -1.71
SSM4YIL030C DLD1P32891 587 aa4.34□□□□□ -1.71
SSM4YIL030C YGR130CP53278 816 aa4.34□□□□□ -1.71
SSM4YIL030C RTR1P40084 226 aaPredicted RBP4.34□□□□□ -1.72
SSM4YIL030C SRS2P12954 1174 aa4.33□□□□□ -1.72
SSM4YIL030C BYE1P36106 594 aa4.33□□□□□ -1.72
SSM4YIL030C TRP5P00931 707 aaKnown RBP4.33□□□□□ -1.72
SSM4YIL030C TPD3P31383 635 aa4.33□□□□□ -1.72
SSM4YIL030C SIS2P36024 562 aa4.33□□□□□ -1.72
SSM4YIL030C GYP7P48365 746 aa4.33□□□□□ -1.72
SSM4YIL030C EAF7P53911 425 aaKnown RBP4.33□□□□□ -1.72
SSM4YIL030C ARL1P38116 183 aaKnown RBP4.33□□□□□ -1.72
SSM4YIL030C BOI2P39969 1040 aa4.33□□□□□ -1.72
SSM4YIL030C CEP3P40969 608 aa4.33□□□□□ -1.72
SSM4YIL030C YNR029CP53729 429 aaKnown RBP4.33□□□□□ -1.72
SSM4YIL030C ITT1Q04638 464 aa4.33□□□□□ -1.72
SSM4YIL030C FAR11P53917 953 aa4.32□□□□□ -1.72
SSM4YIL030C LCD1Q04377 747 aa4.32□□□□□ -1.72
SSM4YIL030C CAB1Q04430 367 aa4.32□□□□□ -1.72
SSM4YIL030C VPS72Q03388 795 aa4.32□□□□□ -1.72
SSM4YIL030C YOL057WQ08225 711 aa4.32□□□□□ -1.72
SSM4YIL030C NKP2Q06162 153 aa4.31□□□□□ -1.72
SSM4YIL030C SWI1P09547 1314 aa4.31□□□□□ -1.72
SSM4YIL030C MCM3P24279 971 aaKnown RBP4.31□□□□□ -1.72
SSM4YIL030C AAP1P37898 856 aaKnown RBP4.31□□□□□ -1.72
SSM4YIL030C ITC1P53125 1264 aa4.31□□□□□ -1.72
SSM4YIL030C PDR18P53756 1333 aa4.31□□□□□ -1.72
SSM4YIL030C KTR3P38130 404 aaPredicted RBP4.3□□□□□ -1.72
SSM4YIL030C BRN1P38170 754 aa4.3□□□□□ -1.72
SSM4YIL030C RIF1P29539 1916 aa4.3□□□□□ -1.72
SSM4YIL030C AKL1P38080 1108 aaKnown RBP4.3□□□□□ -1.72
SSM4YIL030C MOT1P32333 1867 aa4.3□□□□□ -1.72
SSM4YIL030C SPO22P40511 975 aa4.29□□□□□ -1.72
SSM4YIL030C MAL13P53338 473 aa4.29□□□□□ -1.72
SSM4YIL030C VTC3Q02725 835 aa4.29□□□□□ -1.72
SSM4YIL030C EPS1P40557 701 aa4.29□□□□□ -1.72
SSM4YIL030C CSI1Q04368 295 aa4.29□□□□□ -1.72
SSM4YIL030C FPR3P38911 411 aaKnown RBP4.29□□□□□ -1.72
SSM4YIL030C RVS167P39743 482 aaKnown RBP4.29□□□□□ -1.72
SSM4YIL030C MVP1P40959 511 aaKnown RBP4.29□□□□□ -1.72
SSM4YIL030C NPL4P33755 580 aa4.28□□□□□ -1.72
SSM4YIL030C UGA3P26370 528 aa4.28□□□□□ -1.72
SSM4YIL030C ORC1P54784 914 aaPredicted RBP4.28□□□□□ -1.72
SSM4YIL030C PMD1P32634 1753 aa4.28□□□□□ -1.72
SSM4YIL030C COQ4O13525 335 aa4.28□□□□□ -1.72
SSM4YIL030C QCR6P00127 147 aa4.28□□□□□ -1.72
SSM4YIL030C YPT11P48559 417 aa4.28□□□□□ -1.72
SSM4YIL030C PKH3Q03306 898 aaPredicted RBP4.28□□□□□ -1.72
SSM4YIL030C STR2P47164 639 aa4.27□□□□□ -1.73
SSM4YIL030C ADR1P07248 1323 aa4.27□□□□□ -1.73
SSM4YIL030C SSK22P25390 1331 aaPredicted RBP4.27□□□□□ -1.73
SSM4YIL030C RNR2P09938 399 aaKnown RBP4.26□□□□□ -1.73
SSM4YIL030C FRS2P15625 503 aaKnown RBP4.26□□□□□ -1.73
SSM4YIL030C SRP54P20424 541 aaKnown RBP4.26□□□□□ -1.73
Retrieved 100 of 5,963 RNA–protein pairs in 19.5 ms