RNA–Protein interactions for RNA: YHR150W

PEX28, Transcript of Peroxisomal integral membrane peroxin, yeastyeast

Gene PEX28, Length 1,740 nt, Biotype protein coding, Subcellular localisation Peroxisome .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PEX28YHR150W GYP7P48365 746 aa9.16□□□□□ -0.94
PEX28YHR150W AOS1Q06624 347 aa9.16□□□□□ -0.94
PEX28YHR150W TRP5P00931 707 aaKnown RBP9.15□□□□□ -0.94
PEX28YHR150W YRF1-4O13559 1382 aa9.14□□□□□ -0.95
PEX28YHR150W PRI1P10363 409 aa9.14□□□□□ -0.95
PEX28YHR150W MAM1P40065 302 aa9.14□□□□□ -0.95
PEX28YHR150W ROX1P25042 368 aa9.13□□□□□ -0.95
PEX28YHR150W ENT1Q12518 454 aa9.13□□□□□ -0.95
PEX28YHR150W RCR1P38212 213 aa9.12□□□□□ -0.95
PEX28YHR150W REB1P21538 810 aa9.11□□□□□ -0.95
PEX28YHR150W ILV3P39522 585 aaKnown RBP9.11□□□□□ -0.95
PEX28YHR150W CTF4Q01454 927 aa9.11□□□□□ -0.95
PEX28YHR150W RLF2Q12495 606 aa9.11□□□□□ -0.95
PEX28YHR150W YRF1-2P40105 1681 aa9.11□□□□□ -0.95
PEX28YHR150W APC1P53886 1748 aa9.11□□□□□ -0.95
PEX28YHR150W BMS1Q08965 1183 aaKnown RBP9.11□□□□□ -0.95
PEX28YHR150W VPS24P36095 224 aaKnown RBP9.1□□□□□ -0.95
PEX28YHR150W SRT1Q03175 343 aa9.1□□□□□ -0.95
PEX28YHR150W NSE3Q05541 303 aa9.1□□□□□ -0.95
PEX28YHR150W ISW2Q08773 1120 aa9.1□□□□□ -0.95
PEX28YHR150W APP1P53933 587 aa9.08□□□□□ -0.96
PEX28YHR150W COQ4O13525 335 aa9.08□□□□□ -0.96
PEX28YHR150W KCC4P25389 1037 aa9.08□□□□□ -0.96
PEX28YHR150W PRY3P47033 881 aa9.08□□□□□ -0.96
PEX28YHR150W ENV9Q08651 330 aa9.08□□□□□ -0.96
PEX28YHR150W RRP5Q05022 1729 aaKnown RBP9.07□□□□□ -0.96
PEX28YHR150W UGA3P26370 528 aa9.07□□□□□ -0.96
PEX28YHR150W CAB3P36076 571 aa9.07□□□□□ -0.96
PEX28YHR150W RPG1P38249 964 aaKnown RBP9.07□□□□□ -0.96
PEX28YHR150W CSI1Q04368 295 aa9.07□□□□□ -0.96
PEX28YHR150W YIL177CP40434 1758 aa9.06□□□□□ -0.96
PEX28YHR150W YJL225CP40889 1758 aa9.06□□□□□ -0.96
PEX28YHR150W YNG2P38806 282 aaKnown RBP9.06□□□□□ -0.96
PEX28YHR150W IES2P40154 320 aa9.06□□□□□ -0.96
PEX28YHR150W RSF2P46974 1380 aa9.06□□□□□ -0.96
PEX28YHR150W SLN1P39928 1220 aaPredicted RBP9.05□□□□□ -0.96
PEX28YHR150W SPO1P53541 631 aa9.05□□□□□ -0.96
PEX28YHR150W MEC3Q02574 474 aa9.05□□□□□ -0.96
PEX28YHR150W ECM16Q04217 1267 aaKnown RBP9.05□□□□□ -0.96
PEX28YHR150W NKP2Q06162 153 aa9.05□□□□□ -0.96
PEX28YHR150W NOP8Q08287 484 aaPredicted RBP9.05□□□□□ -0.96
PEX28YHR150W MSP1P28737 362 aa9.05□□□□□ -0.96
PEX28YHR150W EDE1P34216 1381 aa9.04□□□□□ -0.96
PEX28YHR150W YKL133CP36066 463 aa9.04□□□□□ -0.96
PEX28YHR150W YPP1P46951 817 aa9.04□□□□□ -0.96
PEX28YHR150W INP54Q08227 384 aaKnown RBP9.04□□□□□ -0.96
PEX28YHR150W FKS3Q04952 1785 aa9.04□□□□□ -0.96
PEX28YHR150W RFC1P38630 861 aaKnown RBP9.03□□□□□ -0.96
PEX28YHR150W ATG13Q06628 738 aa9.03□□□□□ -0.96
PEX28YHR150W URB1P34241 1764 aaKnown RBP9.03□□□□□ -0.96
PEX28YHR150W NUP145P49687 1317 aa9.03□□□□□ -0.96
PEX28YHR150W RAD4P14736 754 aa9.02□□□□□ -0.96
PEX28YHR150W NMD2P38798 1089 aaKnown RBP9.02□□□□□ -0.96
PEX28YHR150W ITC1P53125 1264 aa9.02□□□□□ -0.96
PEX28YHR150W ADE16P54113 591 aaKnown RBP9.02□□□□□ -0.96
PEX28YHR150W ALE1Q08548 619 aa9.02□□□□□ -0.96
PEX28YHR150W LSP1Q12230 341 aaKnown RBP9.02□□□□□ -0.96
PEX28YHR150W RAD50P12753 1312 aa9.02□□□□□ -0.97
PEX28YHR150W DLD1P32891 587 aa9.01□□□□□ -0.97
PEX28YHR150W ARL1P38116 183 aaKnown RBP9.01□□□□□ -0.97
PEX28YHR150W FRK1Q03002 865 aaPredicted RBP9.01□□□□□ -0.97
PEX28YHR150W YAH1Q12184 172 aaKnown RBP9.01□□□□□ -0.97
PEX28YHR150W SRS2P12954 1174 aa9□□□□□ -0.97
PEX28YHR150W OSM1P21375 501 aaKnown RBP9□□□□□ -0.97
PEX28YHR150W AAD16Q02895 342 aa9□□□□□ -0.97
PEX28YHR150W IMH1Q06704 911 aaKnown RBP9□□□□□ -0.97
PEX28YHR150W YOL057WQ08225 711 aa9□□□□□ -0.97
PEX28YHR150W RPS19AP07280 144 aaKnown RBP9□□□□□ -0.97
PEX28YHR150W RPS19BP07281 144 aaPredicted RBP9□□□□□ -0.97
PEX28YHR150W BRN1P38170 754 aa9□□□□□ -0.97
PEX28YHR150W YBP2P53169 641 aa9□□□□□ -0.97
PEX28YHR150W YGR122WP53272 402 aa9□□□□□ -0.97
PEX28YHR150W TEA1P47988 759 aa8.99□□□□□ -0.97
PEX28YHR150W GCR2Q01722 534 aa8.99□□□□□ -0.97
PEX28YHR150W MRP7P12687 371 aa8.98□□□□□ -0.97
PEX28YHR150W EBP2P36049 427 aaKnown RBP8.98□□□□□ -0.97
PEX28YHR150W ZDS2P54786 942 aa8.98□□□□□ -0.97
PEX28YHR150W RAD24P32641 659 aa8.97□□□□□ -0.97
PEX28YHR150W KNS1P32350 737 aaPredicted RBP8.97□□□□□ -0.97
PEX28YHR150W SWC3P31376 625 aa8.96□□□□□ -0.98
PEX28YHR150W RMT2Q03305 412 aa8.96□□□□□ -0.98
PEX28YHR150W VPS64Q03944 604 aa8.96□□□□□ -0.98
PEX28YHR150W HXT13P39924 564 aa8.95□□□□□ -0.98
PEX28YHR150W LYS2P07702 1392 aa8.94□□□□□ -0.98
PEX28YHR150W NUP133P36161 1157 aa8.94□□□□□ -0.98
PEX28YHR150W COBP00163 385 aa8.94□□□□□ -0.98
PEX28YHR150W HXT17P53631 564 aa8.94□□□□□ -0.98
PEX28YHR150W DNM1P54861 757 aa8.94□□□□□ -0.98
PEX28YHR150W NOT3P06102 836 aaKnown RBP8.92□□□□□ -0.98
PEX28YHR150W BDP1P46678 594 aa8.92□□□□□ -0.98
PEX28YHR150W YGL081WP53156 320 aa8.92□□□□□ -0.98
PEX28YHR150W NOP53Q12080 455 aaKnown RBP8.92□□□□□ -0.98
PEX28YHR150W ROM2P51862 1356 aaKnown RBP8.92□□□□□ -0.98
PEX28YHR150W VAS1P07806 1104 aaKnown RBP8.91□□□□□ -0.98
PEX28YHR150W CDC16P09798 840 aa8.91□□□□□ -0.98
PEX28YHR150W GCD7P32502 381 aaPredicted RBP8.91□□□□□ -0.98
PEX28YHR150W CST6P40535 587 aa8.91□□□□□ -0.98
PEX28YHR150W DOT5P40553 215 aa8.91□□□□□ -0.98
PEX28YHR150W NPA3P47122 385 aa8.91□□□□□ -0.98
PEX28YHR150W COG8Q04632 607 aa8.91□□□□□ -0.98
Retrieved 100 of 5,963 RNA–protein pairs in 31.7 ms