RNA–Protein interactions for RNA: YHR113W

APE4, Transcript of Cytoplasmic aspartyl aminopeptidase with possible vacuole function, yeastyeast

Gene APE4, Length 1,473 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
APE4YHR113W DSD1P53095 428 aa8.85□□□□□ -0.99
APE4YHR113W EDE1P34216 1381 aa8.84□□□□□ -0.99
APE4YHR113W RIM15P43565 1770 aa8.84□□□□□ -1
APE4YHR113W RRP46P53256 223 aaPredicted RBP8.83□□□□□ -1
APE4YHR113W YKR075CP36155 307 aa8.83□□□□□ -1
APE4YHR113W INP54Q08227 384 aaKnown RBP8.83□□□□□ -1
APE4YHR113W AOS1Q06624 347 aa8.81□□□□□ -1
APE4YHR113W TSR3Q12094 313 aaKnown RBP8.81□□□□□ -1
APE4YHR113W NUP145P49687 1317 aa8.79□□□□□ -1
APE4YHR113W NPR2P39923 615 aa8.79□□□□□ -1
APE4YHR113W MPP10P47083 593 aaKnown RBP8.79□□□□□ -1
APE4YHR113W CTF4Q01454 927 aa8.79□□□□□ -1
APE4YHR113W YDL144CQ07589 356 aa8.79□□□□□ -1
APE4YHR113W OSM1P21375 501 aaKnown RBP8.78□□□□□ -1
APE4YHR113W YBP2P53169 641 aa8.78□□□□□ -1
APE4YHR113W PRD1P25375 712 aa8.77□□□□□ -1
APE4YHR113W LYS4P49367 693 aaPredicted RBP8.77□□□□□ -1.01
APE4YHR113W KCC4P25389 1037 aa8.76□□□□□ -1.01
APE4YHR113W NTH2P35172 780 aa8.76□□□□□ -1.01
APE4YHR113W YBL086CP38177 466 aa8.76□□□□□ -1.01
APE4YHR113W DMA1P38823 416 aa8.76□□□□□ -1.01
APE4YHR113W ALE1Q08548 619 aa8.76□□□□□ -1.01
APE4YHR113W GRX1P25373 110 aaKnown RBP8.74□□□□□ -1.01
APE4YHR113W YBR287WP38355 427 aa8.73□□□□□ -1.01
APE4YHR113W ALD2P47771 506 aa8.73□□□□□ -1.01
APE4YHR113W RMT2Q03305 412 aa8.73□□□□□ -1.01
APE4YHR113W THI22Q06490 572 aa8.73□□□□□ -1.01
APE4YHR113W MSB4Q12317 492 aa8.73□□□□□ -1.01
APE4YHR113W TPD3P31383 635 aa8.72□□□□□ -1.01
APE4YHR113W YNL050CP53952 270 aa8.72□□□□□ -1.01
APE4YHR113W IOC4Q04213 475 aa8.72□□□□□ -1.01
APE4YHR113W SSA2P10592 639 aaKnown RBP8.71□□□□□ -1.01
APE4YHR113W UGA2P38067 497 aa8.71□□□□□ -1.01
APE4YHR113W ZDS1P50111 915 aaKnown RBP8.71□□□□□ -1.01
APE4YHR113W NSE3Q05541 303 aa8.71□□□□□ -1.01
APE4YHR113W RTT109Q07794 436 aa8.71□□□□□ -1.01
APE4YHR113W UGA3P26370 528 aa8.7□□□□□ -1.02
APE4YHR113W BUG1Q12191 341 aa8.7□□□□□ -1.02
APE4YHR113W RRT14P40470 206 aa8.7□□□□□ -1.02
APE4YHR113W SAP155P43612 1002 aa8.7□□□□□ -1.02
APE4YHR113W GRE2Q12068 342 aaKnown RBP8.7□□□□□ -1.02
APE4YHR113W BDF1P35817 686 aa8.69□□□□□ -1.02
APE4YHR113W RPP0P05317 312 aaKnown RBP8.68□□□□□ -1.02
APE4YHR113W RAD4P14736 754 aa8.68□□□□□ -1.02
APE4YHR113W VPS27P40343 622 aaKnown RBP8.68□□□□□ -1.02
APE4YHR113W CTH1P47976 325 aa8.68□□□□□ -1.02
APE4YHR113W TUM1Q08686 304 aaKnown RBP8.68□□□□□ -1.02
APE4YHR113W SUI2P20459 304 aaKnown RBP8.67□□□□□ -1.02
APE4YHR113W SSP1P38871 571 aa8.67□□□□□ -1.02
APE4YHR113W MAM1P40065 302 aa8.67□□□□□ -1.02
APE4YHR113W BUD27P43573 796 aaKnown RBP RIP-Chip data8.67□□□□□ -1.02not detected
APE4YHR113W BMS1Q08965 1183 aaKnown RBP8.67□□□□□ -1.02
APE4YHR113W NOP53Q12080 455 aaKnown RBP8.67□□□□□ -1.02
APE4YHR113W NSR1P27476 414 aaKnown RBP RIP-Chip data8.66□□□□□ -1.02not detected
APE4YHR113W GTT3P39996 337 aa8.66□□□□□ -1.02
APE4YHR113W PRY3P47033 881 aa8.66□□□□□ -1.02
APE4YHR113W TEA1P47988 759 aa8.66□□□□□ -1.02
APE4YHR113W GYP7P48365 746 aa8.66□□□□□ -1.02
APE4YHR113W HEF3P53978 1044 aaKnown RBP8.66□□□□□ -1.02
APE4YHR113W ALD3P54114 506 aa8.66□□□□□ -1.02
APE4YHR113W CDC45Q08032 650 aa8.66□□□□□ -1.02
APE4YHR113W COQ4O13525 335 aa8.65□□□□□ -1.02
APE4YHR113W LYS2P07702 1392 aa8.65□□□□□ -1.02
APE4YHR113W HPC2Q01448 625 aa8.64□□□□□ -1.03
APE4YHR113W SER1P33330 395 aaKnown RBP8.64□□□□□ -1.03
APE4YHR113W MDG1P53885 366 aa8.64□□□□□ -1.03
APE4YHR113W VPS64Q03944 604 aa8.64□□□□□ -1.03
APE4YHR113W UTP10P42945 1769 aaKnown RBP8.63□□□□□ -1.03
APE4YHR113W YGL082WP53155 381 aa8.63□□□□□ -1.03
APE4YHR113W SSP2Q08646 371 aa8.63□□□□□ -1.03
APE4YHR113W ZDS2P54786 942 aa8.62□□□□□ -1.03
APE4YHR113W RVB2Q12464 471 aaKnown RBP8.62□□□□□ -1.03
APE4YHR113W UTP22P53254 1237 aaPredicted RBP8.61□□□□□ -1.03
APE4YHR113W SRT1Q03175 343 aa8.61□□□□□ -1.03
APE4YHR113W PRS1P32895 427 aaKnown RBP8.6□□□□□ -1.03
APE4YHR113W YFR016CP43597 1233 aaKnown RBP8.6□□□□□ -1.03
APE4YHR113W CTI6Q08923 506 aa8.6□□□□□ -1.03
APE4YHR113W APL2P36000 726 aaPredicted RBP8.59□□□□□ -1.03
APE4YHR113W RIX7Q07844 837 aaKnown RBP8.59□□□□□ -1.03
APE4YHR113W PHM7Q12252 991 aa8.59□□□□□ -1.03
APE4YHR113W NYV1Q12255 253 aa8.59□□□□□ -1.03
APE4YHR113W OXP1P28273 1286 aa8.58□□□□□ -1.04
APE4YHR113W FUN12P39730 1002 aaKnown RBP8.58□□□□□ -1.04
APE4YHR113W PKH1Q03407 766 aa8.58□□□□□ -1.04
APE4YHR113W YOL057WQ08225 711 aa8.58□□□□□ -1.04
APE4YHR113W MAK21Q12176 1025 aaKnown RBP8.58□□□□□ -1.04
APE4YHR113W DAL5P15365 543 aa8.57□□□□□ -1.04
APE4YHR113W NUP133P36161 1157 aa8.57□□□□□ -1.04
APE4YHR113W TOS1P38288 455 aa8.57□□□□□ -1.04
APE4YHR113W ARP8Q12386 881 aaKnown RBP RIP-Chip data8.57□□□□□ -1.04not detected
APE4YHR113W LPD1P09624 499 aaKnown RBP8.56□□□□□ -1.04
APE4YHR113W MRP7P12687 371 aa8.56□□□□□ -1.04
APE4YHR113W NOP8Q08287 484 aaPredicted RBP8.56□□□□□ -1.04
APE4YHR113W DNM1P54861 757 aa8.55□□□□□ -1.04
APE4YHR113W ARG8P18544 423 aa8.54□□□□□ -1.04
APE4YHR113W MRPL32P25348 183 aa8.54□□□□□ -1.04
APE4YHR113W MSN5P52918 1224 aa8.54□□□□□ -1.04
APE4YHR113W YRB30P53107 440 aaPredicted RBP8.54□□□□□ -1.04
APE4YHR113W SWI1P09547 1314 aa8.53□□□□□ -1.04
APE4YHR113W YKR023WP36119 530 aaKnown RBP8.53□□□□□ -1.04
Retrieved 100 of 5,963 RNA–protein pairs in 45.7 ms