RNA–Protein interactions for RNA: YHR088W

RPF1, Transcript of Protein involved in assembly and export of the large ribosomal subunit, yeastyeast

Gene RPF1, Length 888 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPF1YHR088W ARG8P18544 423 aa6.88□□□□□ -1.31
RPF1YHR088W PTK2P47116 818 aaKnown RBP6.87□□□□□ -1.31
RPF1YHR088W NUP85P46673 744 aa6.86□□□□□ -1.31
RPF1YHR088W RPN1P38764 993 aaKnown RBP6.85□□□□□ -1.31
RPF1YHR088W KIN1P13185 1064 aa6.84□□□□□ -1.31
RPF1YHR088W RAD59Q12223 238 aa6.84□□□□□ -1.31
RPF1YHR088W ARG82P07250 355 aa6.82□□□□□ -1.32
RPF1YHR088W YBL086CP38177 466 aa6.82□□□□□ -1.32
RPF1YHR088W EMW1P42842 904 aaKnown RBP6.82□□□□□ -1.32
RPF1YHR088W GLY1P37303 387 aaKnown RBP6.81□□□□□ -1.32
RPF1YHR088W ACO2P39533 789 aa6.8□□□□□ -1.32
RPF1YHR088W OPT2Q06593 877 aa6.8□□□□□ -1.32
RPF1YHR088W YDL176WQ12027 708 aa6.8□□□□□ -1.32
RPF1YHR088W FIG4P42837 879 aa6.79□□□□□ -1.32
RPF1YHR088W TEC1P18412 486 aa6.78□□□□□ -1.32
RPF1YHR088W MIP1P15801 1254 aa6.77□□□□□ -1.33
RPF1YHR088W AAD14P42884 376 aa6.77□□□□□ -1.33
RPF1YHR088W LSC2P53312 427 aa6.77□□□□□ -1.33
RPF1YHR088W NAF1P53919 492 aaKnown RBP6.77□□□□□ -1.33
RPF1YHR088W MAK16P10962 306 aaPredicted RBP6.76□□□□□ -1.33
RPF1YHR088W SCW11P53189 542 aa6.76□□□□□ -1.33
RPF1YHR088W UBP2Q01476 1272 aa6.76□□□□□ -1.33
RPF1YHR088W CSE4P36012 229 aa6.75□□□□□ -1.33
RPF1YHR088W APP1P53933 587 aa6.74□□□□□ -1.33
RPF1YHR088W GUT2P32191 649 aa6.73□□□□□ -1.33
RPF1YHR088W MKS1P34072 584 aa6.73□□□□□ -1.33
RPF1YHR088W HPC2Q01448 625 aa6.73□□□□□ -1.33
RPF1YHR088W CAF120P53836 1060 aa6.72□□□□□ -1.33
RPF1YHR088W TY1A-BLQ12266 440 aa6.72□□□□□ -1.33
RPF1YHR088W RPP2BP02400 110 aaKnown RBP6.71□□□□□ -1.34
RPF1YHR088W SPT5P27692 1063 aaKnown RBP6.71□□□□□ -1.34
RPF1YHR088W YPR084WQ06821 456 aa6.71□□□□□ -1.34
RPF1YHR088W FBP26P32604 452 aa6.7□□□□□ -1.34
RPF1YHR088W MRX12P47084 519 aa6.7□□□□□ -1.34
RPF1YHR088W YJR098CP47139 656 aa6.7□□□□□ -1.34
RPF1YHR088W GUA1P38625 525 aaKnown RBP6.69□□□□□ -1.34
RPF1YHR088W BDS1Q08347 646 aa6.69□□□□□ -1.34
RPF1YHR088W STE6P12866 1290 aa6.68□□□□□ -1.34
RPF1YHR088W STE20Q03497 939 aaKnown RBP6.68□□□□□ -1.34
RPF1YHR088W FRA1Q07825 749 aa6.68□□□□□ -1.34
RPF1YHR088W BRL1P38770 471 aa6.67□□□□□ -1.34
RPF1YHR088W DFG5Q05031 458 aa6.67□□□□□ -1.34
RPF1YHR088W TCB1Q12466 1186 aa6.66□□□□□ -1.34
RPF1YHR088W YIR007WP40566 764 aa6.65□□□□□ -1.34
RPF1YHR088W ITT1Q04638 464 aa6.65□□□□□ -1.34
RPF1YHR088W ATG20Q07528 640 aa6.65□□□□□ -1.34
RPF1YHR088W DLD1P32891 587 aa6.64□□□□□ -1.35
RPF1YHR088W VTC4P47075 721 aa6.64□□□□□ -1.35
RPF1YHR088W YGR035CP53222 116 aa6.64□□□□□ -1.35
RPF1YHR088W ISU1Q03020 165 aa6.64□□□□□ -1.35
RPF1YHR088W YBL036CP38197 257 aa6.63□□□□□ -1.35
RPF1YHR088W OSH7P38755 437 aa6.63□□□□□ -1.35
RPF1YHR088W TRK2P28584 889 aa6.62□□□□□ -1.35
RPF1YHR088W YPP1P46951 817 aa6.61□□□□□ -1.35
RPF1YHR088W DLD3P39976 496 aaKnown RBP6.6□□□□□ -1.35
RPF1YHR088W TY1A-MR1Q04215 440 aa6.6□□□□□ -1.35
RPF1YHR088W ATG3P40344 310 aa6.59□□□□□ -1.35
RPF1YHR088W ROG3P43602 733 aa6.59□□□□□ -1.35
RPF1YHR088W MCM16Q12262 181 aa6.59□□□□□ -1.35
RPF1YHR088W DPH6Q12429 685 aa6.59□□□□□ -1.35
RPF1YHR088W APL6P46682 809 aa6.58□□□□□ -1.36
RPF1YHR088W HPF1Q05164 967 aa6.58□□□□□ -1.36
RPF1YHR088W YPR204WQ08995 1032 aa6.58□□□□□ -1.36
RPF1YHR088W DAL1P32375 460 aa6.57□□□□□ -1.36
RPF1YHR088W LYS5P50113 272 aa6.57□□□□□ -1.36
RPF1YHR088W TFB3Q03290 321 aa6.57□□□□□ -1.36
RPF1YHR088W UTP13Q05946 817 aaKnown RBP6.57□□□□□ -1.36
RPF1YHR088W SPT2P06843 333 aaPredicted RBP6.56□□□□□ -1.36
RPF1YHR088W EMP47P43555 445 aa6.56□□□□□ -1.36
RPF1YHR088W CDC19P00549 500 aaKnown RBP6.54□□□□□ -1.36
RPF1YHR088W HGH1P48362 394 aaKnown RBP6.54□□□□□ -1.36
RPF1YHR088W MSN5P52918 1224 aa6.53□□□□□ -1.36
RPF1YHR088W UTR2P32623 467 aa6.52□□□□□ -1.37
RPF1YHR088W TBS1P38114 1094 aa6.52□□□□□ -1.37
RPF1YHR088W ISR1Q06098 443 aaKnown RBP6.52□□□□□ -1.37
RPF1YHR088W CCP1P00431 361 aa6.51□□□□□ -1.37
RPF1YHR088W YDJ1P25491 409 aaKnown RBP6.51□□□□□ -1.37
RPF1YHR088W WTM2Q12206 467 aa6.51□□□□□ -1.37
RPF1YHR088W SUP45P12385 437 aaKnown RBP6.5□□□□□ -1.37
RPF1YHR088W MTC5Q03897 1148 aa6.5□□□□□ -1.37
RPF1YHR088W DAT1P13483 248 aaKnown RBP6.49□□□□□ -1.37
RPF1YHR088W ISF1P32488 338 aa6.49□□□□□ -1.37
RPF1YHR088W JJJ3P47138 172 aa6.49□□□□□ -1.37
RPF1YHR088W UBP15P50101 1230 aa6.49□□□□□ -1.37
RPF1YHR088W PKC1P24583 1151 aa6.48□□□□□ -1.37
RPF1YHR088W NAM8Q00539 523 aaKnown RBP6.48□□□□□ -1.37
RPF1YHR088W BIO2P32451 375 aa6.47□□□□□ -1.37
RPF1YHR088W AHP1P38013 176 aaKnown RBP6.46□□□□□ -1.38
RPF1YHR088W SSN3P39073 555 aa6.46□□□□□ -1.38
RPF1YHR088W ICP55P40051 511 aa6.45□□□□□ -1.38
RPF1YHR088W SLA1P32790 1244 aa6.44□□□□□ -1.38
RPF1YHR088W SOH1P38633 127 aa6.44□□□□□ -1.38
RPF1YHR088W CEM1P39525 442 aa6.44□□□□□ -1.38
RPF1YHR088W SUM1P46676 1062 aa6.44□□□□□ -1.38
RPF1YHR088W CUZ1P53899 274 aa6.44□□□□□ -1.38
RPF1YHR088W PHM7Q12252 991 aa6.44□□□□□ -1.38
RPF1YHR088W ENO2P00925 437 aaKnown RBP6.43□□□□□ -1.38
RPF1YHR088W HAL5P38970 855 aaKnown RBP6.43□□□□□ -1.38
RPF1YHR088W SLX8P40072 274 aa6.43□□□□□ -1.38
RPF1YHR088W RIM21P48565 533 aa6.43□□□□□ -1.38
Retrieved 100 of 5,963 RNA–protein pairs in 127.6 ms