RNA–Protein interactions for RNA: YHL030W

ECM29, Transcript of Scaffold protein, yeast

Gene ECM29, Length 5,607 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
ECM29	YHL030W	TY4A-H	Q6Q5P6	413 aa		3.13	□□□□□ -1.91
ECM29	YHL030W	IMP2'	P32351	346 aa		3.13	□□□□□ -1.91
ECM29	YHL030W	MIF2	P35201	549 aa		3.13	□□□□□ -1.91
ECM29	YHL030W	YIL092W	P40497	633 aa		3.13	□□□□□ -1.91
ECM29	YHL030W	MRPL10	P36520	322 aa		3.13	□□□□□ -1.91
ECM29	YHL030W	IPL1	P38991	367 aa		3.13	□□□□□ -1.91
ECM29	YHL030W	CCT5	P40413	562 aa	Known RBP	3.13	□□□□□ -1.91
ECM29	YHL030W	BRE1	Q07457	700 aa	Known RBP	3.13	□□□□□ -1.91
ECM29	YHL030W	NUP159	P40477	1460 aa		3.13	□□□□□ -1.91
ECM29	YHL030W	RPN12	P32496	274 aa		3.12	□□□□□ -1.91
ECM29	YHL030W	RVS167	P39743	482 aa	Known RBP	3.12	□□□□□ -1.91
ECM29	YHL030W	DRS2	P39524	1355 aa		3.12	□□□□□ -1.91
ECM29	YHL030W	STU2	P46675	888 aa		3.12	□□□□□ -1.91
ECM29	YHL030W	TEA1	P47988	759 aa		3.12	□□□□□ -1.91
ECM29	YHL030W	OPY2	Q06810	360 aa		3.12	□□□□□ -1.91
ECM29	YHL030W	PSK2	Q08217	1101 aa		3.12	□□□□□ -1.91
ECM29	YHL030W	YAP3	P38749	330 aa		3.12	□□□□□ -1.91
ECM29	YHL030W	RPN1	P38764	993 aa	Known RBP	3.12	□□□□□ -1.91
ECM29	YHL030W	SSF1	P38789	453 aa	Predicted RBP	3.12	□□□□□ -1.91
ECM29	YHL030W	TIM50	Q02776	476 aa		3.12	□□□□□ -1.91
ECM29	YHL030W	TLG2	Q08144	397 aa		3.12	□□□□□ -1.91
ECM29	YHL030W	MRP7	P12687	371 aa		3.12	□□□□□ -1.91
ECM29	YHL030W	HCA4	P20448	770 aa	Known RBP	3.12	□□□□□ -1.91
ECM29	YHL030W	MLC1	P53141	149 aa		3.12	□□□□□ -1.91
ECM29	YHL030W	MEC3	Q02574	474 aa		3.12	□□□□□ -1.91
ECM29	YHL030W	RPN7	Q06103	429 aa	Known RBP	3.12	□□□□□ -1.91
ECM29	YHL030W	GEA2	P39993	1459 aa	Known RBP	3.12	□□□□□ -1.91
ECM29	YHL030W	APT1	P49435	187 aa	Known RBP	3.11	□□□□□ -1.91
ECM29	YHL030W	UTP13	Q05946	817 aa	Known RBP	3.11	□□□□□ -1.91
ECM29	YHL030W	CSC1	Q06538	782 aa		3.11	□□□□□ -1.91
ECM29	YHL030W	PEX19	Q07418	342 aa		3.11	□□□□□ -1.91
ECM29	YHL030W	NOP53	Q12080	455 aa	Known RBP	3.11	□□□□□ -1.91
ECM29	YHL030W	PSH1	Q12161	406 aa		3.11	□□□□□ -1.91
ECM29	YHL030W	SPT2	P06843	333 aa	Predicted RBP	3.11	□□□□□ -1.91
ECM29	YHL030W	SWI6	P09959	803 aa		3.11	□□□□□ -1.91
ECM29	YHL030W	SEG2	P34250	1132 aa		3.11	□□□□□ -1.91
ECM29	YHL030W	NST1	P53935	1240 aa		3.11	□□□□□ -1.91
ECM29	YHL030W	TAP42	Q04372	366 aa		3.11	□□□□□ -1.91
ECM29	YHL030W	RTT109	Q07794	436 aa		3.11	□□□□□ -1.91
ECM29	YHL030W	TY1B-DR4	Q07793	1604 aa		3.11	□□□□□ -1.91
ECM29	YHL030W	SWI1	P09547	1314 aa		3.11	□□□□□ -1.91
ECM29	YHL030W	RGP1	P16664	663 aa		3.11	□□□□□ -1.91
ECM29	YHL030W	UGA3	P26370	528 aa		3.11	□□□□□ -1.91
ECM29	YHL030W	SMC2	P38989	1170 aa	Known RBP	3.11	□□□□□ -1.91
ECM29	YHL030W	JJJ1	P53863	590 aa		3.11	□□□□□ -1.91
ECM29	YHL030W	CSI1	Q04368	295 aa		3.11	□□□□□ -1.91
ECM29	YHL030W	MDM38	Q08179	573 aa		3.11	□□□□□ -1.91
ECM29	YHL030W	RAV1	P47104	1357 aa		3.11	□□□□□ -1.91
ECM29	YHL030W	REI1	P38344	393 aa	Predicted RBP	3.11	□□□□□ -1.91
ECM29	YHL030W	EDE1	P34216	1381 aa		3.11	□□□□□ -1.91
ECM29	YHL030W	NUP145	P49687	1317 aa		3.11	□□□□□ -1.91
ECM29	YHL030W	HSP82	P02829	709 aa	Known RBP	3.11	□□□□□ -1.91
ECM29	YHL030W	SRB4	P32569	687 aa		3.11	□□□□□ -1.91
ECM29	YHL030W	EIS1	Q05050	843 aa	Known RBP	3.11	□□□□□ -1.91
ECM29	YHL030W	MRD1	Q06106	887 aa	Known RBP	3.11	□□□□□ -1.91
ECM29	YHL030W	RPO31	P04051	1460 aa		3.1	□□□□□ -1.91
ECM29	YHL030W	HXK1	P04806	485 aa	Known RBP	3.1	□□□□□ -1.91
ECM29	YHL030W	NFU1	P32860	256 aa		3.1	□□□□□ -1.91
ECM29	YHL030W	RPS0B	P46654	252 aa	Known RBP	3.1	□□□□□ -1.91
ECM29	YHL030W	GCR2	Q01722	534 aa		3.1	□□□□□ -1.91
ECM29	YHL030W	YLH47	Q06493	454 aa		3.1	□□□□□ -1.91
ECM29	YHL030W	TSR3	Q12094	313 aa	Known RBP	3.1	□□□□□ -1.91
ECM29	YHL030W	KRE5	P22023	1365 aa		3.1	□□□□□ -1.91
ECM29	YHL030W	KCC4	P25389	1037 aa		3.1	□□□□□ -1.91
ECM29	YHL030W	OPY1	P38271	328 aa		3.1	□□□□□ -1.91
ECM29	YHL030W	PRP3	Q03338	469 aa	Predicted RBP	3.1	□□□□□ -1.91
ECM29	YHL030W	CDC37	P06101	506 aa	Known RBP	3.1	□□□□□ -1.91
ECM29	YHL030W	RRP43	P25359	394 aa	Predicted RBP	3.1	□□□□□ -1.91
ECM29	YHL030W	PRX1	P34227	261 aa	Known RBP	3.1	□□□□□ -1.91
ECM29	YHL030W	YIR014W	P40570	242 aa		3.1	□□□□□ -1.91
ECM29	YHL030W	HGH1	P48362	394 aa	Known RBP	3.1	□□□□□ -1.91
ECM29	YHL030W	SEN54	Q02825	467 aa	Predicted RBP	3.1	□□□□□ -1.91
ECM29	YHL030W	HIM1	Q06674	414 aa		3.1	□□□□□ -1.91
ECM29	YHL030W	OSH2	Q12451	1283 aa		3.1	□□□□□ -1.91
ECM29	YHL030W	MRC1	P25588	1096 aa		3.1	□□□□□ -1.91
ECM29	YHL030W	SSE1	P32589	693 aa	Known RBP	3.1	□□□□□ -1.91
ECM29	YHL030W	BYE1	P36106	594 aa		3.1	□□□□□ -1.91
ECM29	YHL030W	SET2	P46995	733 aa	Known RBP	3.1	□□□□□ -1.91
ECM29	YHL030W	YBP2	P53169	641 aa		3.1	□□□□□ -1.91
ECM29	YHL030W	PWP2	P25635	923 aa	Known RBP	3.09	□□□□□ -1.91
ECM29	YHL030W	YKT6	P36015	200 aa	Known RBP	3.09	□□□□□ -1.91
ECM29	YHL030W	SEC27	P41811	889 aa	Known RBP	3.09	□□□□□ -1.91
ECM29	YHL030W	THI22	Q06490	572 aa		3.09	□□□□□ -1.91
ECM29	YHL030W	MCM2	P29469	868 aa		3.09	□□□□□ -1.91
ECM29	YHL030W	UBC6	P33296	250 aa	Predicted RBP	3.09	□□□□□ -1.91
ECM29	YHL030W	YNL050C	P53952	270 aa		3.09	□□□□□ -1.91
ECM29	YHL030W	SPT5	P27692	1063 aa	Known RBP	3.09	□□□□□ -1.91
ECM29	YHL030W	SMC1	P32908	1225 aa		3.09	□□□□□ -1.91
ECM29	YHL030W	STO1	P34160	861 aa	Known RBP	3.09	□□□□□ -1.91
ECM29	YHL030W	TYS1	P36421	394 aa	Known RBP	3.09	□□□□□ -1.91
ECM29	YHL030W	UTP14	Q04500	899 aa	Known RBP	3.09	□□□□□ -1.91
ECM29	YHL030W	YLR287C	Q05881	355 aa		3.09	□□□□□ -1.91
ECM29	YHL030W	SMC6	Q12749	1114 aa		3.09	□□□□□ -1.91
ECM29	YHL030W	ESP1	Q03018	1630 aa		3.09	□□□□□ -1.91
ECM29	YHL030W	RAD4	P14736	754 aa		3.09	□□□□□ -1.92
ECM29	YHL030W	RPC37	P36121	282 aa		3.09	□□□□□ -1.92
ECM29	YHL030W	HOS4	P40480	1083 aa		3.09	□□□□□ -1.92
ECM29	YHL030W	CEP3	P40969	608 aa		3.09	□□□□□ -1.92
ECM29	YHL030W	HUL5	P53119	910 aa		3.09	□□□□□ -1.92
ECM29	YHL030W	PLP2	Q12017	286 aa		3.09	□□□□□ -1.92

Retrieved 100 of 5,963 RNA–protein pairs in 12.3 ms