RNA–Protein interactions for RNA: YFR027W

ECO1, Transcript of Acetyltransferase, yeast

Gene ECO1, Length 846 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
ECO1	YFR027W	TBF1	Q02457	562 aa		5.37	□□□□□ -1.55
ECO1	YFR027W	RAD59	Q12223	238 aa		5.37	□□□□□ -1.55
ECO1	YFR027W	TRK2	P28584	889 aa		5.36	□□□□□ -1.55
ECO1	YFR027W	YPR097W	Q06839	1073 aa		5.36	□□□□□ -1.55
ECO1	YFR027W	YDL206W	Q12424	762 aa		5.36	□□□□□ -1.55
ECO1	YFR027W	ARG8	P18544	423 aa		5.35	□□□□□ -1.55
ECO1	YFR027W	GLY1	P37303	387 aa	Known RBP	5.35	□□□□□ -1.55
ECO1	YFR027W	BRL1	P38770	471 aa		5.35	□□□□□ -1.55
ECO1	YFR027W	YIR007W	P40566	764 aa		5.35	□□□□□ -1.55
ECO1	YFR027W	TFB3	Q03290	321 aa		5.35	□□□□□ -1.55
ECO1	YFR027W	ALR1	Q08269	859 aa		5.35	□□□□□ -1.55
ECO1	YFR027W	MRT4	P33201	236 aa	Known RBP	5.34	□□□□□ -1.55
ECO1	YFR027W	YGR035C	P53222	116 aa		5.34	□□□□□ -1.55
ECO1	YFR027W	YLR346C	Q06139	101 aa		5.33	□□□□□ -1.56
ECO1	YFR027W	CSE4	P36012	229 aa		5.32	□□□□□ -1.56
ECO1	YFR027W	NUP85	P46673	744 aa		5.32	□□□□□ -1.56
ECO1	YFR027W	HGH1	P48362	394 aa	Known RBP	5.32	□□□□□ -1.56
ECO1	YFR027W	HPF1	Q05164	967 aa		5.32	□□□□□ -1.56
ECO1	YFR027W	TY1A-BL	Q12266	440 aa		5.32	□□□□□ -1.56
ECO1	YFR027W	SRF1	Q12516	437 aa		5.32	□□□□□ -1.56
ECO1	YFR027W	MAK16	P10962	306 aa	Predicted RBP	5.3	□□□□□ -1.56
ECO1	YFR027W	KIP2	P28743	706 aa		5.3	□□□□□ -1.56
ECO1	YFR027W	PKC1	P24583	1151 aa		5.29	□□□□□ -1.56
ECO1	YFR027W	IXR1	P33417	597 aa		5.29	□□□□□ -1.56
ECO1	YFR027W	SCW11	P53189	542 aa		5.29	□□□□□ -1.56
ECO1	YFR027W	DMA2	P53924	522 aa		5.29	□□□□□ -1.56
ECO1	YFR027W	MIP1	P15801	1254 aa		5.28	□□□□□ -1.56
ECO1	YFR027W	YBL036C	P38197	257 aa		5.28	□□□□□ -1.56
ECO1	YFR027W	NAF1	P53919	492 aa	Known RBP	5.28	□□□□□ -1.56
ECO1	YFR027W	SPT5	P27692	1063 aa	Known RBP	5.27	□□□□□ -1.57
ECO1	YFR027W	VAC17	P25591	423 aa		5.26	□□□□□ -1.57
ECO1	YFR027W	RTT106	P40161	455 aa		5.25	□□□□□ -1.57
ECO1	YFR027W	BIO2	P32451	375 aa		5.24	□□□□□ -1.57
ECO1	YFR027W	FIG4	P42837	879 aa		5.24	□□□□□ -1.57
ECO1	YFR027W	AAD14	P42884	376 aa		5.23	□□□□□ -1.57
ECO1	YFR027W	TEC1	P18412	486 aa		5.22	□□□□□ -1.57
ECO1	YFR027W	YPR084W	Q06821	456 aa		5.22	□□□□□ -1.57
ECO1	YFR027W	SUP45	P12385	437 aa	Known RBP	5.21	□□□□□ -1.58
ECO1	YFR027W	YBL086C	P38177	466 aa		5.21	□□□□□ -1.58
ECO1	YFR027W	YJL007C	P47080	104 aa		5.21	□□□□□ -1.58
ECO1	YFR027W	LSC2	P53312	427 aa		5.21	□□□□□ -1.58
ECO1	YFR027W	ARG82	P07250	355 aa		5.2	□□□□□ -1.58
ECO1	YFR027W	BIM1	P40013	344 aa		5.2	□□□□□ -1.58
ECO1	YFR027W	YJR098C	P47139	656 aa		5.2	□□□□□ -1.58
ECO1	YFR027W	UBP2	Q01476	1272 aa		5.2	□□□□□ -1.58
ECO1	YFR027W	CCP1	P00431	361 aa		5.19	□□□□□ -1.58
ECO1	YFR027W	YDJ1	P25491	409 aa	Known RBP	5.19	□□□□□ -1.58
ECO1	YFR027W	GUT2	P32191	649 aa		5.19	□□□□□ -1.58
ECO1	YFR027W	ICP55	P40051	511 aa		5.19	□□□□□ -1.58
ECO1	YFR027W	ROG3	P43602	733 aa		5.19	□□□□□ -1.58
ECO1	YFR027W	FRA1	Q07825	749 aa		5.19	□□□□□ -1.58
ECO1	YFR027W	YPR204W	Q08995	1032 aa		5.19	□□□□□ -1.58
ECO1	YFR027W	MCM16	Q12262	181 aa		5.19	□□□□□ -1.58
ECO1	YFR027W	DLD1	P32891	587 aa		5.18	□□□□□ -1.58
ECO1	YFR027W	MRX12	P47084	519 aa		5.18	□□□□□ -1.58
ECO1	YFR027W	TY1A-MR1	Q04215	440 aa		5.18	□□□□□ -1.58
ECO1	YFR027W	TCB1	Q12466	1186 aa		5.18	□□□□□ -1.58
ECO1	YFR027W	ATG32	P40458	529 aa		5.17	□□□□□ -1.58
ECO1	YFR027W	YPP1	P46951	817 aa		5.17	□□□□□ -1.58
ECO1	YFR027W	YNL108C	P53929	270 aa		5.17	□□□□□ -1.58
ECO1	YFR027W	ITT1	Q04638	464 aa		5.17	□□□□□ -1.58
ECO1	YFR027W	ENO2	P00925	437 aa	Known RBP	5.16	□□□□□ -1.58
ECO1	YFR027W	OSH7	P38755	437 aa		5.16	□□□□□ -1.58
ECO1	YFR027W	EMW1	P42842	904 aa	Known RBP	5.16	□□□□□ -1.58
ECO1	YFR027W	STE20	Q03497	939 aa	Known RBP	5.16	□□□□□ -1.58
ECO1	YFR027W	DPH6	Q12429	685 aa		5.16	□□□□□ -1.58
ECO1	YFR027W	TIF1	P10081	395 aa	Known RBP	5.15	□□□□□ -1.59
ECO1	YFR027W	LSB3	P43603	459 aa	Known RBP	5.15	□□□□□ -1.59
ECO1	YFR027W	APL6	P46682	809 aa		5.15	□□□□□ -1.59
ECO1	YFR027W	RIM21	P48565	533 aa		5.15	□□□□□ -1.59
ECO1	YFR027W	PUS1	Q12211	544 aa	Known RBP	5.15	□□□□□ -1.59
ECO1	YFR027W	RPL34B	P40525	121 aa	Known RBP	5.14	□□□□□ -1.59
ECO1	YFR027W	EMP47	P43555	445 aa		5.14	□□□□□ -1.59
ECO1	YFR027W	APP1	P53933	587 aa		5.14	□□□□□ -1.59
ECO1	YFR027W	MDJ1	P35191	511 aa		5.13	□□□□□ -1.59
ECO1	YFR027W	MRX10	Q05648	414 aa		5.13	□□□□□ -1.59
ECO1	YFR027W	ISF1	P32488	338 aa		5.12	□□□□□ -1.59
ECO1	YFR027W	RTG2	P32608	588 aa	Known RBP	5.11	□□□□□ -1.59
ECO1	YFR027W	ATG3	P40344	310 aa		5.11	□□□□□ -1.59
ECO1	YFR027W	JJJ3	P47138	172 aa		5.11	□□□□□ -1.59
ECO1	YFR027W	UTP13	Q05946	817 aa	Known RBP	5.11	□□□□□ -1.59
ECO1	YFR027W	PHM7	Q12252	991 aa		5.11	□□□□□ -1.59
ECO1	YFR027W	ENO1	P00924	437 aa	Known RBP	5.1	□□□□□ -1.59
ECO1	YFR027W	LYS5	P50113	272 aa		5.1	□□□□□ -1.59
ECO1	YFR027W	RDS2	P19541	446 aa	Known RBP	5.09	□□□□□ -1.59
ECO1	YFR027W	FBP26	P32604	452 aa		5.09	□□□□□ -1.59
ECO1	YFR027W	MKS1	P34072	584 aa		5.09	□□□□□ -1.59
ECO1	YFR027W	NAM8	Q00539	523 aa	Known RBP	5.09	□□□□□ -1.59
ECO1	YFR027W	ATG20	Q07528	640 aa		5.09	□□□□□ -1.59
ECO1	YFR027W	RLF2	Q12495	606 aa		5.08	□□□□□ -1.6
ECO1	YFR027W	CDC19	P00549	500 aa	Known RBP	5.07	□□□□□ -1.6
ECO1	YFR027W	STE6	P12866	1290 aa		5.07	□□□□□ -1.6
ECO1	YFR027W	PEP12	P32854	288 aa		5.07	□□□□□ -1.6
ECO1	YFR027W	SIS2	P36024	562 aa		5.07	□□□□□ -1.6
ECO1	YFR027W	SOH1	P38633	127 aa		5.06	□□□□□ -1.6
ECO1	YFR027W	YFL066C	P43538	392 aa		5.06	□□□□□ -1.6
ECO1	YFR027W	ISU1	Q03020	165 aa		5.06	□□□□□ -1.6
ECO1	YFR027W	DFG5	Q05031	458 aa		5.06	□□□□□ -1.6
ECO1	YFR027W	SPT2	P06843	333 aa	Predicted RBP	5.05	□□□□□ -1.6
ECO1	YFR027W	HAL5	P38970	855 aa	Known RBP	5.05	□□□□□ -1.6

Retrieved 100 of 5,963 RNA–protein pairs in 59.2 ms