RNA–Protein interactions for RNA: YER150W

SPI1, Transcript of GPI-anchored cell wall protein involved in weak acid resistance, yeast

Gene SPI1, Length 447 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SPI1	YER150W	ESF2	P53743	316 aa	Known RBP	4.93	□□□□□ -1.62
SPI1	YER150W	CEF1	Q03654	590 aa	Predicted RBP	4.93	□□□□□ -1.62
SPI1	YER150W	PSH1	Q12161	406 aa		4.93	□□□□□ -1.62
SPI1	YER150W	AI4	P03878	556 aa		4.92	□□□□□ -1.62
SPI1	YER150W	GRX4	P32642	244 aa		4.92	□□□□□ -1.62
SPI1	YER150W	POL32	P47110	350 aa		4.92	□□□□□ -1.62
SPI1	YER150W	BNI4	P53858	892 aa		4.92	□□□□□ -1.62
SPI1	YER150W	OYE2	Q03558	400 aa	Known RBP	4.92	□□□□□ -1.62
SPI1	YER150W	COG4	Q06096	861 aa		4.92	□□□□□ -1.62
SPI1	YER150W	MSC6	Q08818	692 aa	Known RBP	4.92	□□□□□ -1.62
SPI1	YER150W	NKP1	Q12493	238 aa		4.92	□□□□□ -1.62
SPI1	YER150W	CIT2	P08679	460 aa		4.91	□□□□□ -1.62
SPI1	YER150W	PUP1	P25043	261 aa		4.91	□□□□□ -1.62
SPI1	YER150W	BIO2	P32451	375 aa		4.91	□□□□□ -1.62
SPI1	YER150W	RTG2	P32608	588 aa	Known RBP	4.91	□□□□□ -1.62
SPI1	YER150W	BLI1	P35727	113 aa		4.91	□□□□□ -1.62
SPI1	YER150W	CAB3	P36076	571 aa		4.91	□□□□□ -1.62
SPI1	YER150W	ILV3	P39522	585 aa	Known RBP	4.91	□□□□□ -1.62
SPI1	YER150W	PTC2	P39966	464 aa	Known RBP	4.91	□□□□□ -1.62
SPI1	YER150W	DNM1	P54861	757 aa		4.91	□□□□□ -1.62
SPI1	YER150W	YML083C	Q04526	418 aa		4.91	□□□□□ -1.62
SPI1	YER150W	YML082W	Q04533	649 aa	Known RBP	4.91	□□□□□ -1.62
SPI1	YER150W	COX6	P00427	148 aa		4.9	□□□□□ -1.63
SPI1	YER150W	YKL091C	P33324	310 aa	Known RBP	4.9	□□□□□ -1.63
SPI1	YER150W	JIP5	Q06214	492 aa	Predicted RBP	4.9	□□□□□ -1.63
SPI1	YER150W	MAG2	Q06436	670 aa	Known RBP	4.9	□□□□□ -1.63
SPI1	YER150W	YBL113C	Q7M4S9	792 aa		4.9	□□□□□ -1.63
SPI1	YER150W	TAF13	P11747	167 aa		4.89	□□□□□ -1.63
SPI1	YER150W	DAL5	P15365	543 aa		4.89	□□□□□ -1.63
SPI1	YER150W	ATE1	P16639	503 aa		4.89	□□□□□ -1.63
SPI1	YER150W	PWP2	P25635	923 aa	Known RBP	4.89	□□□□□ -1.63
SPI1	YER150W	DPB3	P27344	201 aa		4.89	□□□□□ -1.63
SPI1	YER150W	COQ8	P27697	501 aa		4.89	□□□□□ -1.63
SPI1	YER150W	GRX7	P38068	203 aa		4.89	□□□□□ -1.63
SPI1	YER150W	YBL036C	P38197	257 aa		4.89	□□□□□ -1.63
SPI1	YER150W	UBP3	Q01477	912 aa	Known RBP RIP-Chip data	4.89	□□□□□ -1.63	not detected
SPI1	YER150W	MEH1	Q02205	184 aa		4.89	□□□□□ -1.63
SPI1	YER150W	YMR196W	Q04336	1088 aa		4.89	□□□□□ -1.63
SPI1	YER150W	NSE3	Q05541	303 aa		4.89	□□□□□ -1.63
SPI1	YER150W	ENT2	Q05785	613 aa		4.89	□□□□□ -1.63
SPI1	YER150W	ERP4	Q12450	207 aa		4.89	□□□□□ -1.63
SPI1	YER150W	MPC54	Q08550	464 aa		4.88	□□□□□ -1.63
SPI1	YER150W	RAS1	P01119	309 aa		4.87	□□□□□ -1.63
SPI1	YER150W	SSD1	P24276	1250 aa	Known RBP RIP-Chip data	4.87	□□□□□ -1.63	not detected
SPI1	YER150W	SEC6	P32844	805 aa		4.87	□□□□□ -1.63
SPI1	YER150W	SEC8	P32855	1065 aa		4.87	□□□□□ -1.63
SPI1	YER150W	DEF1	P35732	738 aa	Known RBP	4.87	□□□□□ -1.63
SPI1	YER150W	VPS24	P36095	224 aa	Known RBP	4.87	□□□□□ -1.63
SPI1	YER150W	IOC3	P43596	787 aa		4.87	□□□□□ -1.63
SPI1	YER150W	SSF2	Q12153	453 aa	Predicted RBP	4.87	□□□□□ -1.63
SPI1	YER150W	YGR161W-C	Q3E744	92 aa		4.87	□□□□□ -1.63
SPI1	YER150W	OPI1	P21957	404 aa		4.86	□□□□□ -1.63
SPI1	YER150W	RPN12	P32496	274 aa		4.86	□□□□□ -1.63
SPI1	YER150W	ERP5	P38819	212 aa		4.86	□□□□□ -1.63
SPI1	YER150W	VAC8	P39968	578 aa		4.86	□□□□□ -1.63
SPI1	YER150W	TLG1	Q03322	224 aa		4.86	□□□□□ -1.63
SPI1	YER150W	PSK2	Q08217	1101 aa		4.86	□□□□□ -1.63
SPI1	YER150W	TRX2	P22803	104 aa	Known RBP	4.85	□□□□□ -1.63
SPI1	YER150W	FUI1	P38196	639 aa		4.85	□□□□□ -1.63
SPI1	YER150W	NMA111	P53920	997 aa		4.85	□□□□□ -1.63
SPI1	YER150W	RPN4	Q03465	531 aa		4.85	□□□□□ -1.63
SPI1	YER150W	VMS1	Q04311	632 aa	Known RBP	4.85	□□□□□ -1.63
SPI1	YER150W	TY4B-P	A0A0B7P3V8	1104 aa		4.84	□□□□□ -1.63
SPI1	YER150W	STI1	P15705	589 aa	Known RBP RIP-Chip data	4.84	□□□□□ -1.63	not detected
SPI1	YER150W	NFU1	P32860	256 aa		4.84	□□□□□ -1.63
SPI1	YER150W	UBP14	P38237	781 aa	Known RBP	4.84	□□□□□ -1.63
SPI1	YER150W	ENP1	P38333	483 aa	Known RBP	4.84	□□□□□ -1.63
SPI1	YER150W	PPX1	P38698	397 aa		4.84	□□□□□ -1.63
SPI1	YER150W	YHL050C	P38721	697 aa		4.84	□□□□□ -1.63
SPI1	YER150W	YHR219W	P38900	624 aa		4.84	□□□□□ -1.63
SPI1	YER150W	RTT106	P40161	455 aa		4.84	□□□□□ -1.63
SPI1	YER150W	YJL049W	P47048	450 aa		4.84	□□□□□ -1.63
SPI1	YER150W	UTP14	Q04500	899 aa	Known RBP	4.84	□□□□□ -1.63
SPI1	YER150W	STB3	Q12427	513 aa		4.84	□□□□□ -1.63
SPI1	YER150W	YEL077C	Q3E7X8	1277 aa		4.84	□□□□□ -1.63
SPI1	YER150W	TY4A-H	Q6Q5P6	413 aa		4.84	□□□□□ -1.63
SPI1	YER150W	THS1	P04801	734 aa	Known RBP	4.83	□□□□□ -1.64
SPI1	YER150W	MGE1	P38523	228 aa		4.83	□□□□□ -1.64
SPI1	YER150W	MNN1	P39106	762 aa		4.83	□□□□□ -1.64
SPI1	YER150W	UBP12	P39538	1254 aa		4.83	□□□□□ -1.64
SPI1	YER150W	YGR273C	P53329	174 aa		4.83	□□□□□ -1.64
SPI1	YER150W	YNL108C	P53929	270 aa		4.83	□□□□□ -1.64
SPI1	YER150W	ALD3	P54114	506 aa		4.83	□□□□□ -1.64
SPI1	YER150W	CSE4	P36012	229 aa		4.82	□□□□□ -1.64
SPI1	YER150W	TGL4	P36165	910 aa		4.82	□□□□□ -1.64
SPI1	YER150W	BUD6	P41697	788 aa		4.82	□□□□□ -1.64
SPI1	YER150W	YJR142W	P47173	342 aa		4.82	□□□□□ -1.64
SPI1	YER150W	ITC1	P53125	1264 aa		4.82	□□□□□ -1.64
SPI1	YER150W	SVL3	Q03088	825 aa	Known RBP	4.82	□□□□□ -1.64
SPI1	YER150W	MAL31	P38156	614 aa		4.81	□□□□□ -1.64
SPI1	YER150W	THI12	P42883	340 aa		4.81	□□□□□ -1.64
SPI1	YER150W	THI5	P43534	340 aa		4.81	□□□□□ -1.64
SPI1	YER150W	YJR107W	P47145	328 aa		4.81	□□□□□ -1.64
SPI1	YER150W	THI11	P47183	340 aa		4.81	□□□□□ -1.64
SPI1	YER150W	ALD6	P54115	500 aa	Known RBP	4.81	□□□□□ -1.64
SPI1	YER150W	SYH1	Q02875	849 aa	Known RBP	4.81	□□□□□ -1.64
SPI1	YER150W	THI13	Q07748	340 aa		4.81	□□□□□ -1.64
SPI1	YER150W	SNU66	Q12420	587 aa	Predicted RBP	4.81	□□□□□ -1.64
SPI1	YER150W	YOR131C	Q12486	218 aa		4.81	□□□□□ -1.64
SPI1	YER150W	YPR015C	Q12531	247 aa		4.81	□□□□□ -1.64

Retrieved 100 of 5,963 RNA–protein pairs in 57.7 ms