RNA–Protein interactions for RNA: YER111C

SWI4, Transcript of DNA binding component of the SBF complex (Swi4p-Swi6p), yeastyeast

Gene SWI4, Length 3,282 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SWI4YER111C FIG4P42837 879 aa2□□□□□ -2.09
SWI4YER111C STR2P47164 639 aa2□□□□□ -2.09
SWI4YER111C VAN1P23642 535 aa2□□□□□ -2.09
SWI4YER111C SEC61P32915 480 aa2□□□□□ -2.09
SWI4YER111C RPA14P50106 137 aa2□□□□□ -2.09
SWI4YER111C IOC2Q12072 812 aa2□□□□□ -2.09
SWI4YER111C FUR4P05316 633 aaKnown RBP2□□□□□ -2.09
SWI4YER111C HAP4P14064 554 aa2□□□□□ -2.09
SWI4YER111C PNP1Q05788 311 aa2□□□□□ -2.09
SWI4YER111C YPR097WQ06839 1073 aa2□□□□□ -2.09
SWI4YER111C MIP1P15801 1254 aa1.99□□□□□ -2.09
SWI4YER111C SPT16P32558 1035 aaKnown RBP1.99□□□□□ -2.09
SWI4YER111C GLO3P38682 493 aaKnown RBP1.99□□□□□ -2.09
SWI4YER111C YHL050CP38721 697 aa1.99□□□□□ -2.09
SWI4YER111C YHR219WP38900 624 aa1.99□□□□□ -2.09
SWI4YER111C POL32P47110 350 aa1.99□□□□□ -2.09
SWI4YER111C SEN54Q02825 467 aaPredicted RBP1.99□□□□□ -2.09
SWI4YER111C PHO87P25360 923 aa1.99□□□□□ -2.09
SWI4YER111C KIP2P28743 706 aa1.99□□□□□ -2.09
SWI4YER111C PAC1P39946 494 aaKnown RBP1.99□□□□□ -2.09
SWI4YER111C ACS2P52910 683 aaKnown RBP1.99□□□□□ -2.09
SWI4YER111C BUD20Q08004 166 aaPredicted RBP1.99□□□□□ -2.09
SWI4YER111C PRT1P06103 763 aaKnown RBP1.99□□□□□ -2.09
SWI4YER111C ASF1P32447 279 aa1.99□□□□□ -2.09
SWI4YER111C JIP5Q06214 492 aaPredicted RBP1.99□□□□□ -2.09
SWI4YER111C FRA1Q07825 749 aa1.99□□□□□ -2.09
SWI4YER111C KOG1P38873 1557 aa1.98□□□□□ -2.09
SWI4YER111C DAT1P13483 248 aaKnown RBP1.98□□□□□ -2.09
SWI4YER111C PTC2P39966 464 aaKnown RBP1.98□□□□□ -2.09
SWI4YER111C CWH41P53008 833 aa1.98□□□□□ -2.09
SWI4YER111C ISR1Q06098 443 aaKnown RBP1.98□□□□□ -2.09
SWI4YER111C MSC6Q08818 692 aaKnown RBP1.98□□□□□ -2.09
SWI4YER111C PDC1P06169 563 aaKnown RBP1.98□□□□□ -2.09
SWI4YER111C SEC2P17065 759 aa1.98□□□□□ -2.09
SWI4YER111C OYE2Q03558 400 aaKnown RBP1.98□□□□□ -2.09
SWI4YER111C PUF6Q04373 656 aaKnown RBP1.98□□□□□ -2.09
SWI4YER111C CBC2Q08920 208 aaKnown RBP RIP-Chip data1.98□□□□□ -2.09not detected
SWI4YER111C TSC13Q99190 310 aa1.98□□□□□ -2.09
SWI4YER111C TRS33Q99394 268 aa1.98□□□□□ -2.09
SWI4YER111C NTH2P35172 780 aa1.97□□□□□ -2.09
SWI4YER111C TPS3P38426 1054 aaKnown RBP1.97□□□□□ -2.09
SWI4YER111C YFL034WP43564 1073 aa1.97□□□□□ -2.09
SWI4YER111C CWC15Q03772 175 aaKnown RBP1.97□□□□□ -2.09
SWI4YER111C GAS4Q08271 471 aa1.97□□□□□ -2.09
SWI4YER111C TY1B-DR4Q07793 1604 aa1.97□□□□□ -2.09
SWI4YER111C SRS2P12954 1174 aa1.97□□□□□ -2.09
SWI4YER111C IXR1P33417 597 aa1.97□□□□□ -2.09
SWI4YER111C SPT23P35210 1082 aa1.97□□□□□ -2.09
SWI4YER111C MGE1P38523 228 aa1.97□□□□□ -2.09
SWI4YER111C HXT10P43581 546 aa1.97□□□□□ -2.09
SWI4YER111C ARH1P48360 493 aa1.97□□□□□ -2.09
SWI4YER111C ROM1P53046 1155 aa1.97□□□□□ -2.09
SWI4YER111C AGE1Q04412 482 aa1.97□□□□□ -2.09
SWI4YER111C GYP1Q08484 637 aa1.97□□□□□ -2.09
SWI4YER111C TY1A-DR4O74302 440 aa1.97□□□□□ -2.09
SWI4YER111C TY1A-HP0C2I4 478 aaKnown RBP1.97□□□□□ -2.09
SWI4YER111C TY1A-AP0CX57 440 aa1.97□□□□□ -2.09
SWI4YER111C TY1A-PR1P0CX58 440 aa1.97□□□□□ -2.09
SWI4YER111C TY1A-ORP0CX59 440 aa1.97□□□□□ -2.09
SWI4YER111C TY1A-PR2P0CX60 440 aa1.97□□□□□ -2.09
SWI4YER111C TY1A-DR5P0CX65 440 aa1.97□□□□□ -2.09
SWI4YER111C TY1A-ER2P0CX66 440 aa1.97□□□□□ -2.09
SWI4YER111C TY1A-GR3P0CX67 440 aa1.97□□□□□ -2.09
SWI4YER111C TY1A-LR1P0CX68 440 aa1.97□□□□□ -2.09
SWI4YER111C TY1A-MR2P0CX69 440 aa1.97□□□□□ -2.09
SWI4YER111C PEP7P32609 515 aa1.97□□□□□ -2.09
SWI4YER111C QDR1P40475 563 aa1.97□□□□□ -2.09
SWI4YER111C MDJ2P42834 146 aa1.97□□□□□ -2.09
SWI4YER111C TY1A-JR2P47099 440 aa1.97□□□□□ -2.09
SWI4YER111C ALD2P47771 506 aa1.97□□□□□ -2.09
SWI4YER111C TY1A-DR1Q03856 440 aa1.97□□□□□ -2.09
SWI4YER111C TY1A-ML1Q04706 440 aaKnown RBP1.97□□□□□ -2.09
SWI4YER111C YDR344CQ05510 147 aa1.97□□□□□ -2.09
SWI4YER111C HDA3Q06623 655 aa1.97□□□□□ -2.09
SWI4YER111C ATG20Q07528 640 aa1.97□□□□□ -2.09
SWI4YER111C TY1A-BRQ12217 440 aa1.97□□□□□ -2.09
SWI4YER111C TY1A-NL2Q12470 440 aa1.97□□□□□ -2.09
SWI4YER111C TY1A-GR2Q12485 440 aa1.97□□□□□ -2.09
SWI4YER111C SEC8P32855 1065 aa1.96□□□□□ -2.1
SWI4YER111C PAM1P37304 830 aaKnown RBP1.96□□□□□ -2.1
SWI4YER111C TBS1P38114 1094 aa1.96□□□□□ -2.1
SWI4YER111C APP1P53933 587 aa1.96□□□□□ -2.1
SWI4YER111C FOX2Q02207 900 aaKnown RBP1.96□□□□□ -2.1
SWI4YER111C BOL3P39724 118 aa1.96□□□□□ -2.1
SWI4YER111C AIM9P40053 627 aaKnown RBP1.96□□□□□ -2.1
SWI4YER111C ATE1P16639 503 aa1.95□□□□□ -2.1
SWI4YER111C BNI4P53858 892 aa1.95□□□□□ -2.1
SWI4YER111C SVF1Q05515 481 aa1.95□□□□□ -2.1
SWI4YER111C CYT1P07143 309 aa1.95□□□□□ -2.1
SWI4YER111C HAL5P38970 855 aaKnown RBP1.95□□□□□ -2.1
SWI4YER111C ALD4P46367 519 aaKnown RBP1.95□□□□□ -2.1
SWI4YER111C YJL171CP46992 396 aa1.95□□□□□ -2.1
SWI4YER111C ATG1P53104 897 aa1.95□□□□□ -2.1
SWI4YER111C UTP13Q05946 817 aaKnown RBP1.95□□□□□ -2.1
SWI4YER111C NUT2Q06213 157 aa1.95□□□□□ -2.1
SWI4YER111C PUS5Q06244 254 aa1.95□□□□□ -2.1
SWI4YER111C YPR084WQ06821 456 aa1.95□□□□□ -2.1
SWI4YER111C TRL1P09880 827 aaKnown RBP1.95□□□□□ -2.1
SWI4YER111C RPS6AP0CX37 236 aaKnown RBP1.95□□□□□ -2.1
SWI4YER111C RPS6BP0CX38 236 aaPredicted RBP1.95□□□□□ -2.1
Retrieved 100 of 5,963 RNA–protein pairs in 58.6 ms