RNA–Protein interactions for RNA: YDR401W

YDR401W, Transcript of Dubious open reading frame, yeastyeast

Gene YDR401W, Length 564 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YDR401WYDR401W RRP15Q06511 250 aaPredicted RBP8.59□□□□□ -1.03
YDR401WYDR401W THI13Q07748 340 aa8.59□□□□□ -1.03
YDR401WYDR401W LAM6Q08001 693 aa8.59□□□□□ -1.03
YDR401WYDR401W NUD1P32336 851 aa8.58□□□□□ -1.04
YDR401WYDR401W TPS3P38426 1054 aaKnown RBP8.58□□□□□ -1.04
YDR401WYDR401W STR2P47164 639 aa8.58□□□□□ -1.04
YDR401WYDR401W BUD20Q08004 166 aaPredicted RBP8.58□□□□□ -1.04
YDR401WYDR401W GAL2P13181 574 aa8.57□□□□□ -1.04
YDR401WYDR401W NNF1P47149 201 aa8.57□□□□□ -1.04
YDR401WYDR401W ISM1P48526 1002 aa8.57□□□□□ -1.04
YDR401WYDR401W GYP1Q08484 637 aa8.57□□□□□ -1.04
YDR401WYDR401W MCM16Q12262 181 aa8.56□□□□□ -1.04
YDR401WYDR401W ISF1P32488 338 aa8.55□□□□□ -1.04
YDR401WYDR401W OYE2Q03558 400 aaKnown RBP8.55□□□□□ -1.04
YDR401WYDR401W ENV9Q08651 330 aa8.55□□□□□ -1.04
YDR401WYDR401W DPS1P04802 557 aaKnown RBP8.54□□□□□ -1.04
YDR401WYDR401W TRL1P09880 827 aaKnown RBP8.54□□□□□ -1.04
YDR401WYDR401W MDJ2P42834 146 aa8.54□□□□□ -1.04
YDR401WYDR401W FPR4Q06205 392 aaPredicted RBP8.54□□□□□ -1.04
YDR401WYDR401W WHI5Q12416 295 aa8.54□□□□□ -1.04
YDR401WYDR401W SEC8P32855 1065 aa8.53□□□□□ -1.04
YDR401WYDR401W DOS2P54858 310 aa8.53□□□□□ -1.04
YDR401WYDR401W JIP5Q06214 492 aaPredicted RBP8.53□□□□□ -1.04
YDR401WYDR401W TRM1P15565 570 aaKnown RBP8.52□□□□□ -1.05
YDR401WYDR401W NAF1P53919 492 aaKnown RBP8.52□□□□□ -1.05
YDR401WYDR401W SVF1Q05515 481 aa8.52□□□□□ -1.05
YDR401WYDR401W PRT1P06103 763 aaKnown RBP8.51□□□□□ -1.05
YDR401WYDR401W CST6P40535 587 aa8.51□□□□□ -1.05
YDR401WYDR401W CWC15Q03772 175 aaKnown RBP8.51□□□□□ -1.05
YDR401WYDR401W NPL4P33755 580 aa8.5□□□□□ -1.05
YDR401WYDR401W PPX1P38698 397 aa8.5□□□□□ -1.05
YDR401WYDR401W FAR11P53917 953 aa8.5□□□□□ -1.05
YDR401WYDR401W YNL115CP53925 644 aa8.5□□□□□ -1.05
YDR401WYDR401W EMP47P43555 445 aa8.49□□□□□ -1.05
YDR401WYDR401W YAF9P53930 226 aa8.49□□□□□ -1.05
YDR401WYDR401W SAS4Q04003 481 aa8.49□□□□□ -1.05
YDR401WYDR401W TY1A-DR4O74302 440 aa8.48□□□□□ -1.05
YDR401WYDR401W TY1A-HP0C2I4 478 aaKnown RBP8.48□□□□□ -1.05
YDR401WYDR401W TY1A-AP0CX57 440 aa8.48□□□□□ -1.05
YDR401WYDR401W TY1A-PR1P0CX58 440 aa8.48□□□□□ -1.05
YDR401WYDR401W TY1A-ORP0CX59 440 aa8.48□□□□□ -1.05
YDR401WYDR401W TY1A-PR2P0CX60 440 aa8.48□□□□□ -1.05
YDR401WYDR401W TY1A-DR5P0CX65 440 aa8.48□□□□□ -1.05
YDR401WYDR401W TY1A-ER2P0CX66 440 aa8.48□□□□□ -1.05
YDR401WYDR401W TY1A-GR3P0CX67 440 aa8.48□□□□□ -1.05
YDR401WYDR401W TY1A-LR1P0CX68 440 aa8.48□□□□□ -1.05
YDR401WYDR401W TY1A-MR2P0CX69 440 aa8.48□□□□□ -1.05
YDR401WYDR401W SDH2P21801 266 aa8.48□□□□□ -1.05
YDR401WYDR401W TY1A-JR2P47099 440 aa8.48□□□□□ -1.05
YDR401WYDR401W TY1A-DR1Q03856 440 aa8.48□□□□□ -1.05
YDR401WYDR401W TY1A-ML1Q04706 440 aaKnown RBP8.48□□□□□ -1.05
YDR401WYDR401W TY1A-BRQ12217 440 aa8.48□□□□□ -1.05
YDR401WYDR401W TY1A-NL2Q12470 440 aa8.48□□□□□ -1.05
YDR401WYDR401W TY1A-GR2Q12485 440 aa8.48□□□□□ -1.05
YDR401WYDR401W TOP1P04786 769 aa8.47□□□□□ -1.05
YDR401WYDR401W GCD11P32481 527 aaKnown RBP8.47□□□□□ -1.05
YDR401WYDR401W STB3Q12427 513 aa8.47□□□□□ -1.05
YDR401WYDR401W SEC2P17065 759 aa8.46□□□□□ -1.06
YDR401WYDR401W NMD2P38798 1089 aaKnown RBP8.46□□□□□ -1.06
YDR401WYDR401W PUS6P53294 404 aa8.46□□□□□ -1.06
YDR401WYDR401W PNP1Q05788 311 aa8.46□□□□□ -1.06
YDR401WYDR401W MGE1P38523 228 aa8.45□□□□□ -1.06
YDR401WYDR401W BOL3P39724 118 aa8.45□□□□□ -1.06
YDR401WYDR401W BUB1P41695 1021 aaKnown RBP RIP-Chip data8.45□□□□□ -1.06not detected
YDR401WYDR401W RAS1P01119 309 aa8.44□□□□□ -1.06
YDR401WYDR401W KEX2P13134 814 aa8.44□□□□□ -1.06
YDR401WYDR401W MET1P36150 593 aa8.44□□□□□ -1.06
YDR401WYDR401W RTF1P53064 558 aa8.44□□□□□ -1.06
YDR401WYDR401W ATG1P53104 897 aa8.44□□□□□ -1.06
YDR401WYDR401W PUF6Q04373 656 aaKnown RBP8.44□□□□□ -1.06
YDR401WYDR401W MAG2Q06436 670 aaKnown RBP8.44□□□□□ -1.06
YDR401WYDR401W ERF2Q06551 359 aa8.44□□□□□ -1.06
YDR401WYDR401W YOL098CQ12496 1037 aa8.44□□□□□ -1.06
YDR401WYDR401W PHO87P25360 923 aa8.43□□□□□ -1.06
YDR401WYDR401W RNH70P53331 553 aa8.43□□□□□ -1.06
YDR401WYDR401W TBF1Q02457 562 aa8.43□□□□□ -1.06
YDR401WYDR401W PUN1Q06991 263 aa8.43□□□□□ -1.06
YDR401WYDR401W FUR4P05316 633 aaKnown RBP8.42□□□□□ -1.06
YDR401WYDR401W GLO3P38682 493 aaKnown RBP8.42□□□□□ -1.06
YDR401WYDR401W NUT2Q06213 157 aa8.42□□□□□ -1.06
YDR401WYDR401W QDR1P40475 563 aa8.41□□□□□ -1.06
YDR401WYDR401W ACS2P52910 683 aaKnown RBP8.41□□□□□ -1.06
YDR401WYDR401W HAP4P14064 554 aa8.4□□□□□ -1.06
YDR401WYDR401W VAC8P39968 578 aa8.4□□□□□ -1.06
YDR401WYDR401W ROM1P53046 1155 aa8.4□□□□□ -1.06
YDR401WYDR401W FRT1Q99332 602 aa8.4□□□□□ -1.06
YDR401WYDR401W AMS1P22855 1083 aa8.39□□□□□ -1.07
YDR401WYDR401W PPG1P32838 368 aa8.39□□□□□ -1.07
YDR401WYDR401W YJR107WP47145 328 aa8.39□□□□□ -1.07
YDR401WYDR401W SRS2P12954 1174 aa8.37□□□□□ -1.07
YDR401WYDR401W MRF1P30775 413 aaPredicted RBP8.37□□□□□ -1.07
YDR401WYDR401W MET4P32389 672 aa8.37□□□□□ -1.07
YDR401WYDR401W SOH1P38633 127 aa8.37□□□□□ -1.07
YDR401WYDR401W SRP40P32583 406 aaPredicted RBP8.36□□□□□ -1.07
YDR401WYDR401W ATG3P40344 310 aa8.36□□□□□ -1.07
YDR401WYDR401W RRN7P40992 514 aa8.36□□□□□ -1.07
YDR401WYDR401W YJR008WP47085 338 aa8.36□□□□□ -1.07
YDR401WYDR401W STE20Q03497 939 aaKnown RBP8.36□□□□□ -1.07
YDR401WYDR401W MNL2Q12205 849 aa8.36□□□□□ -1.07
YDR401WYDR401W SPT16P32558 1035 aaKnown RBP8.35□□□□□ -1.07
Retrieved 100 of 5,963 RNA–protein pairs in 8.9 ms