RNA–Protein interactions for RNA: YDR179C

CSN9, Transcript of Subunit of the Cop9 signalosome, yeast

Gene CSN9, Length 489 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CSN9	YDR179C	NIS1	P53939	407 aa		4.71	□□□□□ -1.66
CSN9	YDR179C	UBP2	Q01476	1272 aa		4.71	□□□□□ -1.66
CSN9	YDR179C	OSH7	P38755	437 aa		4.7	□□□□□ -1.66
CSN9	YDR179C	YJR098C	P47139	656 aa		4.7	□□□□□ -1.66
CSN9	YDR179C	ATF2	P53296	535 aa		4.7	□□□□□ -1.66
CSN9	YDR179C	LSC2	P53312	427 aa		4.7	□□□□□ -1.66
CSN9	YDR179C	THI72	Q08579	599 aa		4.7	□□□□□ -1.66
CSN9	YDR179C	FPK1	P53739	893 aa		4.69	□□□□□ -1.66
CSN9	YDR179C	SLY41	P22215	453 aa		4.68	□□□□□ -1.66
CSN9	YDR179C	AAD14	P42884	376 aa		4.68	□□□□□ -1.66
CSN9	YDR179C	YNR021W	P53723	404 aa	Known RBP	4.68	□□□□□ -1.66
CSN9	YDR179C	TBF1	Q02457	562 aa		4.68	□□□□□ -1.66
CSN9	YDR179C	TCB1	Q12466	1186 aa		4.68	□□□□□ -1.66
CSN9	YDR179C	BUB1	P41695	1021 aa	Known RBP RIP-Chip data	4.67	□□□□□ -1.66	not detected
CSN9	YDR179C	PUS6	P53294	404 aa		4.67	□□□□□ -1.66
CSN9	YDR179C	HST2	P53686	357 aa		4.67	□□□□□ -1.66
CSN9	YDR179C	RTT106	P40161	455 aa		4.66	□□□□□ -1.66
CSN9	YDR179C	ALR1	Q08269	859 aa		4.66	□□□□□ -1.66
CSN9	YDR179C	DLD1	P32891	587 aa		4.65	□□□□□ -1.67
CSN9	YDR179C	RPA14	P50106	137 aa		4.65	□□□□□ -1.67
CSN9	YDR179C	GLN1	P32288	370 aa	Known RBP	4.64	□□□□□ -1.67
CSN9	YDR179C	NAM8	Q00539	523 aa	Known RBP	4.64	□□□□□ -1.67
CSN9	YDR179C	YPR097W	Q06839	1073 aa		4.64	□□□□□ -1.67
CSN9	YDR179C	AIM7	Q12156	149 aa		4.64	□□□□□ -1.67
CSN9	YDR179C	MMP1	Q12372	583 aa		4.64	□□□□□ -1.67
CSN9	YDR179C	ARG82	P07250	355 aa		4.63	□□□□□ -1.67
CSN9	YDR179C	SBP1	P10080	294 aa	Known RBP	4.63	□□□□□ -1.67
CSN9	YDR179C	KIP2	P28743	706 aa		4.63	□□□□□ -1.67
CSN9	YDR179C	SKN7	P38889	622 aa		4.63	□□□□□ -1.67
CSN9	YDR179C	AI1	P03875	834 aa		4.62	□□□□□ -1.67
CSN9	YDR179C	IXR1	P33417	597 aa		4.62	□□□□□ -1.67
CSN9	YDR179C	YDL206W	Q12424	762 aa		4.61	□□□□□ -1.67
CSN9	YDR179C	TRM1	P15565	570 aa	Known RBP	4.6	□□□□□ -1.67
CSN9	YDR179C	GLC3	P32775	704 aa		4.6	□□□□□ -1.67
CSN9	YDR179C	YPR053C	Q6Q5F3	151 aa		4.6	□□□□□ -1.67
CSN9	YDR179C	YBL086C	P38177	466 aa		4.58	□□□□□ -1.68
CSN9	YDR179C	SCJ1	P25303	377 aa		4.57	□□□□□ -1.68
CSN9	YDR179C	CDC19	P00549	500 aa	Known RBP	4.56	□□□□□ -1.68
CSN9	YDR179C	ESS1	P22696	170 aa		4.56	□□□□□ -1.68
CSN9	YDR179C	VAC17	P25591	423 aa		4.54	□□□□□ -1.68
CSN9	YDR179C	CSN12	P47130	423 aa		4.54	□□□□□ -1.68
CSN9	YDR179C	SSA2	P10592	639 aa	Known RBP	4.53	□□□□□ -1.68
CSN9	YDR179C	PKH3	Q03306	898 aa	Predicted RBP	4.53	□□□□□ -1.68
CSN9	YDR179C	ARG8	P18544	423 aa		4.52	□□□□□ -1.69
CSN9	YDR179C	YJU3	P28321	313 aa		4.52	□□□□□ -1.69
CSN9	YDR179C	RSC30	P38781	883 aa		4.52	□□□□□ -1.69
CSN9	YDR179C	SBE2	P42223	864 aa	Known RBP	4.52	□□□□□ -1.69
CSN9	YDR179C	ITT1	Q04638	464 aa		4.52	□□□□□ -1.69
CSN9	YDR179C	TDA6	Q06466	467 aa		4.52	□□□□□ -1.69
CSN9	YDR179C	LEU3	P08638	886 aa		4.51	□□□□□ -1.69
CSN9	YDR179C	CUZ1	P53899	274 aa		4.5	□□□□□ -1.69
CSN9	YDR179C	YMR187C	Q03236	431 aa		4.5	□□□□□ -1.69
CSN9	YDR179C	YCK2	P23292	546 aa	Known RBP	4.49	□□□□□ -1.69
CSN9	YDR179C	KTR1	P27810	393 aa	Known RBP	4.49	□□□□□ -1.69
CSN9	YDR179C	APP1	P53933	587 aa		4.49	□□□□□ -1.69
CSN9	YDR179C	RPN1	P38764	993 aa	Known RBP	4.47	□□□□□ -1.69
CSN9	YDR179C	EMW1	P42842	904 aa	Known RBP	4.47	□□□□□ -1.69
CSN9	YDR179C	RAD59	Q12223	238 aa		4.47	□□□□□ -1.69
CSN9	YDR179C	KIN1	P13185	1064 aa		4.46	□□□□□ -1.7
CSN9	YDR179C	TEC1	P18412	486 aa		4.45	□□□□□ -1.7
CSN9	YDR179C	AMN1	P38285	549 aa	Predicted RBP	4.45	□□□□□ -1.7
CSN9	YDR179C	FIG4	P42837	879 aa		4.44	□□□□□ -1.7
CSN9	YDR179C	NAF1	P53919	492 aa	Known RBP	4.44	□□□□□ -1.7
CSN9	YDR179C	GLT1	Q12680	2145 aa	Known RBP	4.44	□□□□□ -1.7
CSN9	YDR179C	RPP2B	P02400	110 aa	Known RBP	4.43	□□□□□ -1.7
CSN9	YDR179C	MCX1	P38323	520 aa	Predicted RBP	4.43	□□□□□ -1.7
CSN9	YDR179C	CEM1	P39525	442 aa		4.43	□□□□□ -1.7
CSN9	YDR179C	MAK16	P10962	306 aa	Predicted RBP	4.42	□□□□□ -1.7
CSN9	YDR179C	GUT2	P32191	649 aa		4.42	□□□□□ -1.7
CSN9	YDR179C	MKS1	P34072	584 aa		4.42	□□□□□ -1.7
CSN9	YDR179C	CSE4	P36012	229 aa		4.42	□□□□□ -1.7
CSN9	YDR179C	IRC24	P40580	263 aa		4.42	□□□□□ -1.7
CSN9	YDR179C	ADE12	P80210	433 aa	Known RBP	4.41	□□□□□ -1.7
CSN9	YDR179C	DFG5	Q05031	458 aa		4.41	□□□□□ -1.7
CSN9	YDR179C	SYT1	Q06836	1226 aa		4.41	□□□□□ -1.7
CSN9	YDR179C	BDS1	Q08347	646 aa		4.41	□□□□□ -1.7
CSN9	YDR179C	FBP26	P32604	452 aa		4.4	□□□□□ -1.71
CSN9	YDR179C	SLN1	P39928	1220 aa	Predicted RBP	4.4	□□□□□ -1.71
CSN9	YDR179C	MRX12	P47084	519 aa		4.4	□□□□□ -1.71
CSN9	YDR179C	YDR215C	Q12240	137 aa		4.4	□□□□□ -1.71
CSN9	YDR179C	SPT5	P27692	1063 aa	Known RBP	4.39	□□□□□ -1.71
CSN9	YDR179C	VTC4	P47075	721 aa		4.39	□□□□□ -1.71
CSN9	YDR179C	HPC2	Q01448	625 aa		4.39	□□□□□ -1.71
CSN9	YDR179C	MCA1	Q08601	432 aa		4.39	□□□□□ -1.71
CSN9	YDR179C	STE6	P12866	1290 aa		4.38	□□□□□ -1.71
CSN9	YDR179C	BRL1	P38770	471 aa		4.38	□□□□□ -1.71
CSN9	YDR179C	STE20	Q03497	939 aa	Known RBP	4.38	□□□□□ -1.71
CSN9	YDR179C	YPR084W	Q06821	456 aa		4.38	□□□□□ -1.71
CSN9	YDR179C	FRA1	Q07825	749 aa		4.38	□□□□□ -1.71
CSN9	YDR179C	LSB6	P42951	607 aa		4.37	□□□□□ -1.71
CSN9	YDR179C	ATG20	Q07528	640 aa		4.37	□□□□□ -1.71
CSN9	YDR179C	GUA1	P38625	525 aa	Known RBP	4.36	□□□□□ -1.71
CSN9	YDR179C	DLD3	P39976	496 aa	Known RBP	4.36	□□□□□ -1.71
CSN9	YDR179C	MAC1	P35192	417 aa		4.35	□□□□□ -1.71
CSN9	YDR179C	ISU1	Q03020	165 aa		4.35	□□□□□ -1.71
CSN9	YDR179C	YPL034W	Q03083	165 aa		4.35	□□□□□ -1.71
CSN9	YDR179C	YBL036C	P38197	257 aa		4.34	□□□□□ -1.71
CSN9	YDR179C	ATG3	P40344	310 aa		4.34	□□□□□ -1.71
CSN9	YDR179C	YPP1	P46951	817 aa		4.34	□□□□□ -1.71
CSN9	YDR179C	DIT1	P21623	536 aa		4.33	□□□□□ -1.72

Retrieved 100 of 5,963 RNA–protein pairs in 35.8 ms