RNA–Protein interactions for RNA: ENST00000639702.1

RBM39-245, Transcript of RNA binding motif protein 39, humanhuman

TSL 5

Gene RBM39, Length 5,914 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-245ENST00000639702 VGFO15240 615 aaPredicted RBP15.28■□□□□ 0.04
RBM39-245ENST00000639702 TRIM6-TRIM34B2RNG4 842 aa15.27■□□□□ 0.04
RBM39-245ENST00000639702 HSP90B1P14625 803 aaKnown RBP15.27■□□□□ 0.04
RBM39-245ENST00000639702 ATAD2BQ9ULI0 1458 aa15.27■□□□□ 0.03
RBM39-245ENST00000639702 MYBBP1AQ9BQG0 1328 aaKnown RBP15.26■□□□□ 0.03
RBM39-245ENST00000639702 EVC2Q86UK5 1308 aa15.26■□□□□ 0.03
RBM39-245ENST00000639702 PTPRGP23470 1445 aa15.26■□□□□ 0.03
RBM39-245ENST00000639702 FANCD2Q9BXW9 1451 aa15.26■□□□□ 0.03
RBM39-245ENST00000639702 CHMP4CQ96CF2 233 aa15.25■□□□□ 0.03
RBM39-245ENST00000639702 KIF3AQ9Y496 699 aa15.25■□□□□ 0.03
RBM39-245ENST00000639702 SMARCA4P51532 1647 aa15.25■□□□□ 0.03
RBM39-245ENST00000639702 SLC4A10Q6U841 1118 aa15.25■□□□□ 0.03
RBM39-245ENST00000639702 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.24■□□□□ 0.03
RBM39-245ENST00000639702 COG3Q96JB2 828 aa15.24■□□□□ 0.03
RBM39-245ENST00000639702 CGNL1Q0VF96 1302 aa15.24■□□□□ 0.03
RBM39-245ENST00000639702 TRAK1Q9UPV9 953 aa15.23■□□□□ 0.03
RBM39-245ENST00000639702 NUTM2DQ5VT03 806 aaPredicted RBP15.23■□□□□ 0.03
RBM39-245ENST00000639702 C1orf141Q5JVX7 400 aa15.23■□□□□ 0.03
RBM39-245ENST00000639702 CCDC146Q8IYE0 955 aa15.22■□□□□ 0.03
RBM39-245ENST00000639702 MFAP1P55081 439 aaKnown RBP15.22■□□□□ 0.03
RBM39-245ENST00000639702 GTF2E1P29083 439 aaPredicted RBP15.21■□□□□ 0.03
RBM39-245ENST00000639702 ST18O60284 1047 aa15.2■□□□□ 0.02
RBM39-245ENST00000639702 LTV1Q96GA3 475 aaPredicted RBP15.2■□□□□ 0.02
RBM39-245ENST00000639702 RBM19Q9Y4C8 960 aaKnown RBP15.2■□□□□ 0.02
RBM39-245ENST00000639702 KIF16BQ96L93 1317 aa15.18■□□□□ 0.02
RBM39-245ENST00000639702 FRAT2O75474 233 aaPredicted RBP15.18■□□□□ 0.02
RBM39-245ENST00000639702 ABCF1Q8NE71 845 aaKnown RBP eCLIP15.18■□□□□ 0.02
RBM39-245ENST00000639702 PHF14O94880 888 aa15.18■□□□□ 0.02
RBM39-245ENST00000639702 LRRFIP1Q32MZ4 808 aaKnown RBP15.18■□□□□ 0.02
RBM39-245ENST00000639702 PANK3Q9H999 370 aa15.17■□□□□ 0.02
RBM39-245ENST00000639702 RASSF8Q8NHQ8 419 aa15.17■□□□□ 0.02
RBM39-245ENST00000639702 E9PSI1 815 aa15.17■□□□□ 0.02
RBM39-245ENST00000639702 EVA1CP58658 441 aa15.17■□□□□ 0.02
RBM39-245ENST00000639702 NGEFQ8N5V2 710 aa15.16■□□□□ 0.02
RBM39-245ENST00000639702 NOC3LQ8WTT2 800 aaKnown RBP15.16■□□□□ 0.02
RBM39-245ENST00000639702 STAC3Q96MF2 364 aa15.16■□□□□ 0.02
RBM39-245ENST00000639702 OSCARQ8IYS5 282 aa15.15■□□□□ 0.02
RBM39-245ENST00000639702 CLUAP1Q96AJ1 413 aa15.15■□□□□ 0.02
RBM39-245ENST00000639702 CUX1P39880 1505 aa15.15■□□□□ 0.02
RBM39-245ENST00000639702 ST20-MTHFSA0A0A6YYL1 179 aa15.14■□□□□ 0.01
RBM39-245ENST00000639702 SLKQ9H2G2 1235 aaPredicted RBP15.14■□□□□ 0.01
RBM39-245ENST00000639702 RTN4Q9NQC3 1192 aaKnown RBP15.14■□□□□ 0.01
RBM39-245ENST00000639702 TOMM22Q9NS69 142 aa15.14■□□□□ 0.01
RBM39-245ENST00000639702 TTC5Q8N0Z6 440 aa15.13■□□□□ 0.01
RBM39-245ENST00000639702 TEFQ10587 303 aa15.13■□□□□ 0.01
RBM39-245ENST00000639702 CENPQQ7L2Z9 268 aaPredicted RBP15.13■□□□□ 0.01
RBM39-245ENST00000639702 ZKSCAN2Q63HK3 967 aa15.13■□□□□ 0.01
RBM39-245ENST00000639702 MYOM3Q5VTT5 1437 aa15.13■□□□□ 0.01
RBM39-245ENST00000639702 DEKP35659 375 aaKnown RBP15.13■□□□□ 0.01
RBM39-245ENST00000639702 NEXNQ0ZGT2 675 aa15.13■□□□□ 0.01
RBM39-245ENST00000639702 GOLGA6L3A6NEY3 463 aa15.12■□□□□ 0.01
RBM39-245ENST00000639702 USP35Q9P2H5 1018 aa15.12■□□□□ 0.01
RBM39-245ENST00000639702 NUTM2FA1L443 756 aa15.12■□□□□ 0.01
RBM39-245ENST00000639702 MARCH6O60337 910 aa15.12■□□□□ 0.01
RBM39-245ENST00000639702 GAPVD1Q14C86 1478 aa15.12■□□□□ 0.01
RBM39-245ENST00000639702 ROCK1Q13464 1354 aa15.11■□□□□ 0.01
RBM39-245ENST00000639702 USP47Q96K76 1375 aa15.11■□□□□ 0.01
RBM39-245ENST00000639702 AMOTL1Q8IY63 956 aa15.11■□□□□ 0.01
RBM39-245ENST00000639702 IPO9Q96P70 1041 aaKnown RBP15.1■□□□□ 0.01
RBM39-245ENST00000639702 NOL10Q9BSC4 688 aaKnown RBP15.1■□□□□ 0.01
RBM39-245ENST00000639702 SF3A1Q15459 793 aaKnown RBP15.1■□□□□ 0.01
RBM39-245ENST00000639702 NCBP3Q53F19 620 aaKnown RBP15.1■□□□□ 0.01
RBM39-245ENST00000639702 ATP6V1DQ9Y5K8 247 aa15.09■□□□□ 0.01
RBM39-245ENST00000639702 DDX11L8A8MPP1 907 aa15.09■□□□□ 0.01
RBM39-245ENST00000639702 RUFY2Q8WXA3 655 aa15.09■□□□□ 0.01
RBM39-245ENST00000639702 DHX57Q6P158 1386 aaKnown RBP15.09■□□□□ 0.01
RBM39-245ENST00000639702 AKAP17AQ02040 695 aaKnown RBP15.09■□□□□ 0.01
RBM39-245ENST00000639702 DIAPH1O60610 1272 aaKnown RBP15.08■□□□□ 0.01
RBM39-245ENST00000639702 SYNE3Q6ZMZ3 975 aa15.08■□□□□ 0.01
RBM39-245ENST00000639702 H3BQV1 296 aa15.08■□□□□ 0.01
RBM39-245ENST00000639702 IFFO2Q5TF58 517 aa15.08■□□□□ 0.01
RBM39-245ENST00000639702 GZF1Q9H116 711 aaPredicted RBP15.08■□□□□ 0.01
RBM39-245ENST00000639702 DDX58O95786 925 aaKnown RBP15.08■□□□□ 0
RBM39-245ENST00000639702 RRP7AQ9Y3A4 280 aaKnown RBP15.08■□□□□ 0
RBM39-245ENST00000639702 MINK1Q8N4C8 1332 aaPredicted RBP15.07■□□□□ 0
RBM39-245ENST00000639702 FAM184AQ8NB25 1140 aa15.07■□□□□ 0
RBM39-245ENST00000639702 CEP89Q96ST8 783 aa15.07■□□□□ 0
RBM39-245ENST00000639702 TPM3P06753 285 aa15.06■□□□□ 0
RBM39-245ENST00000639702 RILPL2Q969X0 211 aa15.06■□□□□ 0
RBM39-245ENST00000639702 API5Q9BZZ5 524 aaKnown RBP15.06■□□□□ 0
RBM39-245ENST00000639702 VPS53Q5VIR6 699 aa15.06■□□□□ 0
RBM39-245ENST00000639702 FGD5Q6ZNL6 1462 aa15.06■□□□□ 0
RBM39-245ENST00000639702 ANKRD45Q5TZF3 282 aa15.06■□□□□ 0
RBM39-245ENST00000639702 CYB5RLQ6IPT4 315 aa15.06■□□□□ 0
RBM39-245ENST00000639702 MIA2Q96PC5 1412 aa15.06■□□□□ 0
RBM39-245ENST00000639702 PSME1Q06323 249 aa15.05■□□□□ 0
RBM39-245ENST00000639702 NOL8Q76FK4 1167 aaKnown RBP15.05■□□□□ 0
RBM39-245ENST00000639702 DDX19BQ9UMR2 479 aa15.05■□□□□ -0
RBM39-245ENST00000639702 DIAPH3Q9NSV4 1193 aa15.05■□□□□ -0
RBM39-245ENST00000639702 TPM2P07951 284 aa15.05■□□□□ -0
RBM39-245ENST00000639702 CPLX2Q6PUV4 134 aaKnown RBP15.05■□□□□ -0
RBM39-245ENST00000639702 GOLGA6L1Q8N7Z2 621 aa15.05■□□□□ -0
RBM39-245ENST00000639702 C9orf78Q9NZ63 289 aaPredicted RBP15.04■□□□□ -0
RBM39-245ENST00000639702 TRIM34Q9BYJ4 488 aa15.04■□□□□ -0
RBM39-245ENST00000639702 FAM161AQ3B820 660 aa15.04■□□□□ -0
RBM39-245ENST00000639702 ZBED9Q6R2W3 1325 aa15.04■□□□□ -0
RBM39-245ENST00000639702 TPD52L1Q16890 204 aaPredicted RBP15.03■□□□□ -0
RBM39-245ENST00000639702 SKOR2Q2VWA4 1001 aaPredicted RBP15.03■□□□□ -0
RBM39-245ENST00000639702 PRKRIP1Q9H875 184 aaPredicted RBP15.02■□□□□ -0
RBM39-245ENST00000639702 RRP1P56182 461 aaKnown RBP15.02■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms